Publications of Z. Nikoloski
All genres
Journal Article (174)
21.
Journal Article
37 (18), pp. 2896 - 2904 (2021)
L2,1-norm regularized multivariate regression model with applications to genomic prediction. Bioinformatics 22.
Journal Article
37 (1), pp. 73 - 81 (2021)
PC2P: parameter-free network-based prediction of protein complexes. Bioinformatics 23.
Journal Article
11 (1), 4787 (2021)
Integration of relative metabolomics and transcriptomics time-course data in a metabolic model pinpoints effects of ribosome biogenesis defects on Arabidopsis thaliana metabolism. Scientific Reports 24.
Journal Article
19, pp. 2170 - 2178 (2021)
Combination of network and molecule structure accurately predicts competitive inhibitory interactions. Computational and Structural Biotechnology Journal 25.
Journal Article
11, 8544 (2021)
Reaction lumping in metabolic networks for application with thermodynamic metabolic flux analysis. Scientific Reports 26.
Journal Article
78, pp. 5123 - 5138 (2021)
Characterization of effects of genetic variants via genome-scale metabolic modelling. Cellular and Molecular Life Sciences 27.
Journal Article
257, 153354 (2021)
Machine learning approaches for crop improvement: Leveraging phenotypic and genotypic big data. Journal of Plant Physiology 28.
Journal Article
36 (9), pp. 2950 - 2951 (2020)
CytoSeg 2.0: automated extraction of actin filaments. Bioinformatics 29.
Journal Article
43 (6), pp. 1376 - 1393 (2020)
Low temperature tolerance of the Antarctic species Deschampsia antarctica: a complex metabolic response associated with nutrient remobilization. Plant, Cell and Environment 30.
Journal Article
Model-assisted identification of metabolic engineering strategies for Jatropha curcas lipid pathways. The Plant Journal (accepted)
31.
Journal Article
80, 101051 (2020)
Towards model-driven characterization and manipulation of plant lipid metabolism. Progress in Lipid Research 32.
Journal Article
103 (6), pp. 2168 - 2177 (2020)
Characterization of maximal enzyme catalytic rates in central metabolism of Arabidopsis thaliana. The Plant Journal 33.
Journal Article
21 (23), pp. 1 - 27 (2020)
Comparative analysis of ros network genes in extremophile eukaryotes. International Journal of Molecular Sciences 34.
Journal Article
5 (2), e20106 (2020)
Supervised Learning of Gene Regulatory Networks. Current Protocols in Plant Biology 35.
Journal Article
16 (4), e1007832 (2020)
Flux-based hierarchical organization of Escherichia coli’s metabolic network. PLoS Computational Biology 36.
Journal Article
11 (1), 2410 (2020)
Integrating molecular markers into metabolic models improves genomic selection for Arabidopsis growth. Nature Communications 37.
Journal Article
266, pp. 283 - 290 (2019)
Coherent network partitions. Discrete applied mathematics 38.
Journal Article
225 (2), pp. 754 - 768 (2019)
Cytochrome respiration pathway and sulphur metabolism sustain stress tolerance to low temperature in the Antarctic species Colobanthus quitensis. New Phytologist 39.
Journal Article
10, 737 (2019)
Kingdom-wide comparison reveals the evolution of diurnal gene expression in Archaeplastida. Nature Communications 40.
Journal Article
179 (3), pp. 894 - 906 (2019)
Computational Approaches to Design and Test Plant Synthetic Metabolic Pathways. Plant Physiology