Publications of J. Selbig

Lohse, M.; Nunes-Nesi, A.; Krueger, P.; Nagel, A.; Hannemann, J.; Giorgi, F. M.; Childs, L.; Osorio, S.; Walther, D.; Selbig, J. et al.; Sreenivasulu, N.; Stitt, M.; Fernie, A. R.; Usadel, B.: Robin: An Intuitive Wizard Application for R-Based Expression Microarray Quality Assessment and Analysis. Plant Physiology 153 (2), pp. 642 - 651 (2010)

Meyer, R. C.; Kusterer, B.; Lisec, J.; Steinfath, M.; Becher, M.; Scharr, H.; Melchinger, A. E.; Selbig, J.; Schurr, U.; Willmitzer, L. et al.; Altmann, T.: QTL analysis of early stage heterosis for biomass in Arabidopsis. Theoretical and Applied Genetics 120 (2), pp. 227 - 237 (2010)

Nikoloski, Z.; May, P.; Selbig, J.: Algebraic connectivity may explain the evolution of gene regulatory networks. Journal of Theoretical Biology 267 (1), pp. 7 - 14 (2010)

Riano-Pachon, D. M.; Kleessen, S.; Neigenfind; Durek, P.; Weber, E.; Engelsberger, W. R.; Walther, D.; Selbig, J.; Schulze, W. X.; Kersten, B.: Proteome-wide survey of phosphorylation patterns affected by nuclear DNA polymorphisms in Arabidopsis thaliana. BMC Genomics 11, p. 411 (2010)

Schwenk, B. B.; Selbig, J.; Ben-Zion, Y.; Holschneider, M.: ExPlanes: exploring planes in triplet data. Journal of Integrative Bioinformatics 7 (3), p. 132 (2010)

Steinfath, M.; Gaertner, T.; Lisec, J.; Meyer, R. C.; Altmann, T.; Willmitzer, L.; Selbig, J.: Prediction of hybrid biomass in Arabidopsis thaliana by selected parental SNP and metabolic markers. Theoretical and Applied Genetics 120 (2), pp. 239 - 247 (2010)

Steinfath, M.; Strehmel, N.; Peters, R.; Schauer, N.; Groth, D.; Hummel, J.; Steup, M.; Selbig, J.; Kopka, J.; Geigenberger, P. et al.; van Dongen, J. T.: Discovering plant metabolic biomarkers for phenotype prediction using an untargeted approach. Plant Biotechnology Journal 8 (8), pp. 900 - 911 (2010)

Bulik, S.; Grimbs, S.; Huthmacher, C.; Selbig, J.; Holzhuetter, H. G.: Kinetic hybrid models composed of mechanistic and simplified enzymatic rate laws - a promising method for speeding up the kinetic modelling of complex metabolic networks. FEBS Journal 276 (2), pp. 410 - 424 (2009)

Durek, P.; Schudoma, C.; Weckwerth, W.; Selbig, J.; Walther, D.: Detection and characterization of 3D-signature phosphorylation site motifs and their contribution towards improved phosphorylation site prediction in proteins. BMC Bioinformatics 10, p. 117 (2009)

Gaertner, T.; Steinfath, M.; Andorf, S.; Lisec, J.; Meyer, R. C.; Altmann, T.; Willmitzer, L.; Selbig, J.: Improved Heterosis Prediction by Combining Information on DNA- and Metabolic Markers. PLoS One 4 (4), p. e5220 (2009)

Lisec, J.; Steinfath, M.; Meyer, R. C.; Selbig, J.; Melchinger, A. E.; Willmitzer, L.; Altmann, T.: Identification of heterotic metabolite QTL in Arabidopsis thaliana RIL and IL populations. Plant Journal 59 (5), pp. 777 - 788 (2009)

Sulpice, R.; Pyl, E. T.; Ishihara, H.; Trenkamp, S.; Steinfath, M.; Witucka-Wall, H.; Gibon, Y.; Usadel, B.; Poree, F.; Piques, M. C. et al.; von Korff, M.; Steinhauser, M.-C.; Keurentjes, J. J. B.; Guenther, M.; Hoehne, M.; Selbig, J.; Fernie, A. R.; Altmann, T.; Stitt, M.: Starch as a major integrator in the regulation of plant growth. Proceedings of the National Academy of Sciences of the United States of America 106 (25), pp. 10348 - 10353 (2009)

Szymanski, J.; Jozefczuk, S.; Nikoloski, Z.; Selbig, J.; Nikiforova, V.; Catchpole, G.; Willmitzer, L.: Stability of Metabolic Correlations under Changing Environmental Conditions in Escherichia coli - A Systems Approach. PLoS One 4 (10), p. e7441 (2009)

Dworschak, S.; Grell, S.; Nikiforova, V. J.; Schaub, T.; Selbig, J.: Modeling biological networks by action languages via answer set programming. Constraints 13 (1-2), pp. 21 - 65 (2008)

Guy, C.; Kaplan, F.; Kopka, J.; Selbig, J.; Hincha, D. K.: Metabolomics of temperature stress. Physiologia Plantarum 132 (2), pp. 220 - 235 (2008)

Heazlewood, J. L.; Durek, P.; Hummel, J.; Selbig, J.; Weckwerth, W.; Walther, D.; Schulze, W. X.: PhosPhAt: a database of phosphorylation sites in Arabidopsis thaliana and a plant-specific phosphorylation site predictor. Nucleic Acids Research 36 (Database issue), pp. D1015 - D1021 (2008)

Koehl, K. I.; Basler, G.; Lüdemann, A.; Selbig, J.; Walther, D.: A plant resource and experiment management system based on the Golm Plant Database as a basic tool for omics research. Plant Methods 4, p. 11 (2008)

Lisec, J.; Meyer, R. C.; Steinfath, M.; Redestig, H.; Becher, M.; Witucka-Wall, H.; Fiehn, O.; Torjek, O.; Selbig, J.; Altmann, T. et al.; Willmitzer, L.: Identification of metabolic and biomass QTL in Arabidopsis thaliana in a parallel analysis of RIL and IL populations. Plant Journal 53 (6), pp. 960 - 972 (2008)

Neigenfind, J.; Gyetvai, G.; Basekow, R.; Diehl, S.; Achenbach, U.; Gebhardt, C.; Selbig, J.; Kersten, B.: Haplotype inference from unphased SNP data in heterozygous polyploids based on SAT. BMC Genomics 9, p. 356 (2008)

Nikoloski, Z.; Grimbs, S.; May, P.; Selbig, J.: Metabolic networks are NP-hard to reconstruct. Journal of Theoretical Biology 254 (4), pp. 807 - 816 (2008)