Publikationen von W. Weckwerth

Zeitschriftenartikel (56)

1.
Zeitschriftenartikel
Timm, S., Nunes-Nesi, A., Florian, A., Eisenhut, M., Morgenthal, K., Wirtz, M., Hell, R., Weckwerth, W., Hagemann, M., Fernie, A. R. & Bauwe, H. Metabolite Profiling in Arabidopsisthaliana with Moderately Impaired Photorespiration Reveals Novel Metabolic Links and Compensatory Mechanisms of Photorespiration. Metabolites 11, (2021).
2.
Zeitschriftenartikel
Hoehenwarter, W., Larhlimi, A., Hummel, J., Egelhofer, V., Selbig, J., van Dongen, J. T., Wienkoop, S. & Weckwerth, W. MAPA Distinguishes Genotype-Specific Variability of Highly Similar Regulatory Protein Isoforms in Potato Tuber. Journal of Proteome Research 10, 2979–2991 (2011).
3.
Zeitschriftenartikel
Joshi, H. J., Hirsch-Hoffmann, M., Baerenfaller, K., Gruissem, W., Baginsky, S., Schmidt, R., Schulze, W. X., Sun, Q., van Wijk, K. J., Egelhofer, V., Wienkoop, S., Weckwerth, W., Bruley, C., Rolland, N., Toyoda, T., Nakagami, H., Jones, A. M., Briggs, S. P., Castleden, I., Tanz, S. K., Millar, A. H. & Heazlewood, J. L. MASCP Gator: An Aggregation Portal for the Visualization of Arabidopsis Proteomics Data. Plant Physiology 155, 259–270 (2011).
4.
Zeitschriftenartikel
Chen, Y., Hoehenwarter, W. & Weckwerth, W. Comparative analysis of phytohormone-responsive phosphoproteins in Arabidopsis thaliana using TiO2-phosphopeptide enrichment and mass accuracy precursor alignment. Plant Journal 63, 1–17 (2010).
5.
Zeitschriftenartikel
Scherling, C., Roscher, C., Giavalisco, P., Schulze, E.-D. & Weckwerth, W. Metabolomics Unravel Contrasting Effects of Biodiversity on the Performance of Individual Plant Species. PLoS One 5, e12569 (2010).
6.
Zeitschriftenartikel
Wienkoop, S., Weiss, J., May, P., Kempa, S., Irgang, S., Recuenco-Munoz, L., Pietzke, M., Schwemmer, T., Rupprecht, J., Egelhofer, V. & Weckwerth, W. Targeted proteomics for Chlamydomonas reinhardtii combined with rapid subcellular protein fractionation, metabolomics and metabolic flux analyses. Molecular Biosystems 6, 1018–1031 (2010).
7.
Zeitschriftenartikel
Baessler, O. Y., Weiss, J., Wienkoop, S., Lehmann, K., Scheler, C., Dolle, S., Schwarz, D., Franken, P., George, E., Worm, M. & Weckwerth, W. Evidence for Novel Tomato Seed Allergens: IgE-Reactive Legumin and Vicilin Proteins Identified by Multidimensional Protein Fractionation-Mass Spectrometry and in Silico Epitope Modeling. Journal of Proteome Research 8, 1111–1122 (2009).
8.
Zeitschriftenartikel
Durek, P., Schudoma, C., Weckwerth, W., Selbig, J. & Walther, D. Detection and characterization of 3D-signature phosphorylation site motifs and their contribution towards improved phosphorylation site prediction in proteins. BMC Bioinformatics 10, 117 (2009).
9.
Zeitschriftenartikel
Ito, J., Taylor, N. L., Castleden, I., Weckwerth, W., Millar, A. H. & Heazlewood, J. L. A survey of the Arabidopsis thaliana mitochondrial phosphoproteome. Proteomics 9, 4229–4240 (2009).
10.
Zeitschriftenartikel
Kempa, S., Hummel, J., Schwemmer, T., Pietzke, M., Strehmel, N., Wienkoop, S., Kopka, J. & Weckwerth, W. An automated GCxGC-TOF-MS protocol for batch-wise extraction and alignment of mass isotopomer matrixes from differential C-13-labelling experiments: a case study for photoautotrophic-mixotrophic grown Chlamydomonas reinhardtii cells. Journal of Basic Microbiology 49, 82–91 (2009).
11.
Zeitschriftenartikel
Larrainzar, E., Wienkoop, S., Scherling, C., Kempa, S., Ladrera, R., Arrese-Igor, C., Weckwerth, W. & Gonzalez, E. M. Carbon Metabolism and Bacteroid Functioning Are Involved in the Regulation of Nitrogen Fixation in Medicago truncatula Under Drought and Recovery. Molecular Plant-Microbe Interactions 22, 1565–1576 (2009).
12.
Zeitschriftenartikel
Scherling, C., Ulrich, K., Ewald, D. & Weckwerth, W. A Metabolic Signature of the Beneficial Interaction of the Endophyte Paenibacillus sp Isolate and In Vitro-Grown Poplar Plants Revealed by Metabolomics. Molecular Plant-Microbe Interactions 22, 1032–1037 (2009).
13.
Zeitschriftenartikel
Heazlewood, J. L., Durek, P., Hummel, J., Selbig, J., Weckwerth, W., Walther, D. & Schulze, W. X. PhosPhAt: a database of phosphorylation sites in Arabidopsis thaliana and a plant-specific phosphorylation site predictor. Nucleic Acids Research 36, D1015–D1021 (2008).
14.
Zeitschriftenartikel
Hoehenwarter, W., van Dongen, J. T., Wienkoop, S., Steinfath, M., Hummel, J., Erban, A., Sulpice, R., Regierer, B., Kopka, J., Geigenberger, P. & Weckwerth, W. A rapid approach for phenotype-screening and database independent detection of cSNP/protein polymorphism using mass accuracy precursor alignment. Proteomics 8, 4214–4225 (2008).
15.
Zeitschriftenartikel
Lehmann, U., Wienkoop, S., Tschoep, H. & Weckwerth, W. If the antibody fails - a mass Western approach. The Plant Journal 55, 1039–1046 (2008).
16.
Zeitschriftenartikel
May, P., Wienkoop, S., Kempa, S., Usadel, B., Christian, N., Rupprecht, J., Weiss, J., Recuenco-Munoz, L., Ebenhoeh, O., Weckwerth, W. & Walther, D. Metabolomics- and proteomics-assisted genome annotation and analysis of the draft metabolic network of Chlamydomonas reinhardtii. Genetics 179, 157–166 (2008).
17.
Zeitschriftenartikel
Timm, S., Nunes-Nesi, A., Pamik, T., Morgenthal, K., Wienkoop, S., Keerberg, O., Weckwerth, W., Kleczkowski, L. A., Fernie, A. R. & Bauwe, H. A Cytosolic Pathway for the Conversion of Hydroxypyruvate to Glycerate during Photorespiration in Arabidopsis. The Plant Cell 20, 2848–2859 (2008).
18.
Zeitschriftenartikel
Weckwerth, W. Integration of metabolomics and proteomics in molecular plant physiology - coping with the complexity by data-dimensionality reduction. Physiologia Plantarum 132, 176–189 (2008).
19.
Zeitschriftenartikel
Wienkoop, S., Morgenthal, K., Wolschin, F., Scholz, M., Selbig, J. & Weckwerth, W. Integration of metabolomic and proteomic phenotypes. Molecular & Cellular Proteomics 7, 1725–1736 (2008).
20.
Zeitschriftenartikel
Engel, N., van den Daele, K., Kolukisaoglu, U., Morgenthal, K., Weckwerth, W., Parnik, T., Keerberg, O. & Bauwe, H. Deletion of glycine decarboxylase in arabidopsis is lethal under nonphotorespiratory conditions. Plant Physiology 144, 1328–1335 (2007).
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