Publikationen von S. Greiner

Zeitschriftenartikel (33)

1.
Zeitschriftenartikel
Golczyk, H., Hřibová, E., Doležel, J., Cuadrado, Á., Garbsch, F., Greiner, S., Janeczko, M., Szklarczyk, M., Masłyk, M. & Kubiński, K. Migration of repetitive DNAs during evolution of the permanent translocation heterozygosity in the oyster plant (Tradescantia section Rhoeo). Chromosoma: Biology of the Nucleus 131, 163–173 (2022).
2.
Zeitschriftenartikel
Kariñho-Betancourt, E., Carlson, D., Hollister, J., Fischer, A., Greiner, S. & Johnson, M. T. J. The evolution of multi-gene families and metabolic pathways in the evening primroses (Oenothera: Onagraceae): A comparative transcriptomics approach. PLoS One 17, (2022).
3.
Zeitschriftenartikel
Fischer, A., Dotzek, J., Walther, D. & Greiner, S. Graph-based models of the Oenothera mitochondrial genome capture the enormous complexity of higher plant mitochondrial DNA organization. NAR: genomics and bioinformatics 4, (2022).
4.
Zeitschriftenartikel
Santangelo, J. S., Ness, R. W., Cohan, B., Fitzpatrick, C. R., Innes, S. G., Koch, S., Miles, L. S., Munim, S., Peres-Neto, P. R., Prashad, C., Tong, A. T., Aguirre, W. E., Akinwole, P. O., Alberti, M., Álvarez, J., Anderson, J. T., Anderson, J. J., Ando, Y., Andrew, N. R., Angeoletto, F., Anstett, D. N., Anstett, J., Aoki-Gonçalves, F., Arietta, A. Z. A., Arroyo, M. T. K., Austen, E. J., Baena-Díaz, F., Barker, C. A., Baylis, H. A., Beliz, J. M., Benitez-Mora, A., Bickford, D., Biedebach, G., Blackburn, G. S., Boehm, M. M. A., Bonser, S. P., Bonte, D., Bragger, J. R., Branquinho, C., Brans, K. I., Bresciano, J. C., Brom, P. D., Bucharova, A., Burt, B., Cahill, J. F., Campbell, K. D., Carlen, E. J., Carmona, D., Castellanos, M. C., Centenaro, G., Chalen, I., Chaves, J. A., Chávez-Pesqueira, M., Chen, X.-Y., Chilton, A. M., Chomiak, K. M., Cisneros-Heredia, D. F., Cisse, I. K., Classen, A. T., Comerford, M. S., Fradinger, C. C., Corney, H., Crawford, A. J., Crawford, K. M., Dahirel, M., David, S., De Haan, R., Deacon, N. J., Dean, C., Del-Val, E., Deligiannis, E. K., Denney, D., Dettlaff, M. A., DiLeo, M. F., Ding, Y.-Y., Domínguez-López, M. E., Dominoni, D. M., Draud, S. L., Dyson, K., Ellers, J., Espinosa, C. I., Essi, L., Falahati-Anbaran, M., Falcão, J. C. F., Fargo, H. T., Fellowes, M. D. E., Fitzpatrick, R. M., Flaherty, L. E., Flood, P. J., Flores, M. F., Fornoni, J., Foster, A. G., Frost, C. J., Fuentes, T. L., Fulkerson, J. R., Gagnon, E., Garbsch, F., Garroway, C. J., Gerstein, A. C., Giasson, M. M., Girdler, E. B., Gkelis, S., Godsoe, W., Golemiec, A. M., Golemiec, M., González-Lagos, C., Gorton, A. J., Gotanda, K. M., Granath, G., Greiner, S., Griffiths, J. S., Grilo, F., Gundel, P. E., Hamilton, B., Hardin, J. M., He, T., Heard, S. B., Henriques, A. F., Hernández-Poveda, M., Hetherington-Rauth, M. C., Hill, S. J., Hochuli, D. F., Hodgins, K. A., Hood, G. R., Hopkins, G. R., Hovanes, K. A., Howard, A. R., Hubbard, S. C., Ibarra-Cerdeña, C. N., Iñiguez-Armijos, C., Jara-Arancio, P., Jarrett, B. J. M., Jeannot, M., Jiménez-Lobato, V., Johnson, M., Johnson, O., Johnson, P. P., Johnson, R., Josephson, M. P., Jung, M. C., Just, M. G., Kahilainen, A., Kailing, O. S., Kariñho-Betancourt, E., Karousou, R., Kirn, L. A., Kirschbaum, A., Laine, A.-L., LaMontagne, J. M., Lampei, C., Lara, C., Larson, E. L., Lázaro-Lobo, A., Le, J. H., Leandro, D. S., Lee, C., Lei, Y., León, C. A., Lequerica Tamara, M. E., Levesque, D. C., Liao, W.-J., Ljubotina, M., Locke, H., Lockett, M. T., Longo, T. C., Lundholm, J. T., MacGillavry, T., Mackin, C. R., Mahmoud, A. R., Manju, I. A., Mariën, J., Martínez, D. N., Martínez-Bartolomé, M., Meineke, E. K., Mendoza-Arroyo, W., Merritt, T. J. S., Merritt, L. E. L., Migiani, G., Minor, E. S., Mitchell, N., Mohammadi Bazargani, M., Moles, A. T., Monk, J. D., Moore, C. M., Morales-Morales, P. A., Moyers, B. T., Muñoz-Rojas, M., Munshi-South, J., Murphy, S. M., Murúa, M. M., Neila, M., Nikolaidis, O., Njunjić, I., Nosko, P., Núñez-Farfán, J., Ohgushi, T., Olsen, K. M., Opedal, Ø. H., Ornelas, C., Parachnowitsch, A. L., Paratore, A. S., Parody-Merino, A. M., Paule, J., Paulo, O. S., Pena, J. C., Pfeiffer, V. W., Pinho, P., Piot, A., Porth, I. M., Poulos, N., Puentes, A., Qu, J., Quintero-Vallejo, E., Raciti, S. M., Raeymaekers, J. A. M., Raveala, K. M., Rennison, D. J., Ribeiro, M. C., Richardson, J. L., Rivas-Torres, G., Rivera, B. J., Roddy, A. B., Rodriguez-Muñoz, E., Román, J. R., Rossi, L. S., Rowntree, J. K., Ryan, T. J., Salinas, S., Sanders, N. J., Santiago-Rosario, L. Y., Savage, A. M., Scheepens, J. F., Schilthuizen, M., Schneider, A. C., Scholier, T., Scott, J. L., Shaheed, S. A., Shefferson, R. P., Shepard, C. A., Shykoff, J. A., Silveira, G., Smith, A. D., Solis-Gabriel, L., Soro, A., Spellman, K. V., Whitney, K. S., Starke-Ottich, I., Stephan, J. G., Stephens, J. D., Szulc, J., Szulkin, M., Tack, A. J. M., Tamburrino, Í., Tate, T. D., Tergemina, E., Theodorou, P., Thompson, K. A., Threlfall, C. G., Tinghitella, R. M., Toledo-Chelala, L., Tong, X., Uroy, L., Utsumi, S., Vandegehuchte, M. L., VanWallendael, A., Vidal, P. M., Wadgymar, S. M., Wang, A.-Y., Wang, N., Warbrick, M. L., Whitney, K. D., Wiesmeier, M., Wiles, J. T., Wu, J., Xirocostas, Z. A., Yan, Z., Yao, J., Yoder, J. B., Yoshida, O., Zhang, J., Zhao, Z., Ziter, C. D., Zuellig, M. P., Zufall, R. A., Zurita, J. E., Zytynska, S. E. & Johnson, M. T. J. Global urban environmental change drives adaptation in white clover. Science 375, 1275–1281 (2022).
5.
Zeitschriftenartikel
Zupok, A., Kozul, D., Schöttler, M. A., Niehörster, J., Garbsch, F., Liere, K., Fischer, A., Zoschke, R., Malinova, I., Bock, R. & Greiner, S. A photosynthesis operon in the chloroplast genome drives speciation in evening primroses. The Plant Cell 33, 2583–2601 (2021).
6.
Zeitschriftenartikel
Malinova, I., Zupok, A., Massouh, A., Schöttler, M. A., Meyer, E. H., Yaneva-Roder, L., Szymanski, W. G., Rößner, M., Ruf, S., Bock, R. & Greiner, S. Correction of Frameshift Mutations in the atpB Gene by Translational Recoding in Chloroplasts of Oenothera and Tobacco. The Plant Cell 33, 1682–1705 (2021).
7.
Zeitschriftenartikel
Greiner, S., Golczyk, H., Malinova, I., Pellizzer, T., Bock, R., Börner, T. & Herrmann, R. G. Chloroplast nucleoids are highly dynamic in ploidy, number, and structure during angiosperm leaf development. The Plant Journal 102, 730–746 (2020).
8.
Zeitschriftenartikel
Greiner, S., Lehwark, P. & Bock, R. OrganellarGenomeDRAW (OGDRAW) version 1.3.1: expanded toolkit for the graphical visualization of organellar genomes. Nucleic Acids Research 47, W59–W64 (2019).
9.
Zeitschriftenartikel
Bdolach, E., Prusty, M. R., Faigenboim-Doron, A., Filichkin, T., Helgerson, L., Schmid, K. J., Greiner, S. & Fridman, E. Thermal plasticity of the circadian clock is under nuclear and cytoplasmic control in wild barley. Plant, Cell and Environment 42, 3105–3120 (2019).
10.
Zeitschriftenartikel
Hollister, J. D., Greiner, S., Johnson, M. T. J. & Wright, S. I. Hybridization and a loss of sex shape genome-wide diversity and the origin of species in the evening primroses (Oenothera, Onagraceae). New Phytologist 224, 1372–1380 (2019).
11.
Zeitschriftenartikel
Leebens-Mack, J. H., Barker, M. S., Carpenter, E. J., Deyholos, M. K., Gitzendanner, M. A., Graham, S. W., Grosse, I., Li, Z., Melkonian, M., Mirarab, S., Porsch, M., Quint, M., Rensing, S. A., Soltis, D. E., Soltis, P. S., Stevenson, D. W., Ullrich, K. K., Wickett, N. J., DeGironimo, L., Edger, P. P., Jordon-Thaden, I. E., Joya, S., Liu, T., Melkonian, B., Miles, N. W., Pokorny, L., Quigley, C., Thomas, P., Villarreal, J. C., Augustin, M. M., Barrett, M. D., Baucom, R. S., Beerling, D. J., Benstein, R. M., Biffin, E., Brockington, S. F., Burge, D. O., Burris, J. N., Burris, K. P., Burtet-Sarramegna, V., Caicedo, A. L., Cannon, S. B., Çebi, Z., Chang, Y., Chater, C., Cheeseman, J. M., Chen, T., Clarke, N. D., Clayton, H., Covshoff, S., Crandall-Stotler, B. J., Cross, H., dePamphilis, C. W., Der, J. P., Determann, R., Dickson, R. C., Stilio, D., S., V., Ellis, S., Fast, E., Feja, N., Field, K. J., Filatov, D. A., Finnegan, P. M., Floyd, S. K., Fogliani, B., García, N., Gâteblé, G., Godden, G. T., Goh, F. (Q. Y., Greiner, S., Harkess, A., Heaney, J. M., Helliwell, K. E., Heyduk, K., Hibberd, J. M., Hodel, R. G. J., Hollingsworth, P. M., Johnson, M. T. J., Jost, R., Joyce, B., Kapralov, M. V., Kazamia, E., Kellogg, E. A., Koch, M. A., Von Konrat, M., Könyves, K., Kutchan, T. M., Lam, V., Larsson, A., Leitch, A. R., Lentz, R., Li, F.-W., Lowe, A. J., Ludwig, M., Manos, P. S., Mavrodiev, E., McCormick, M. K., McKain, M., McLellan, T., McNeal, J. R., Miller, R. E., Nelson, M. N., Peng, Y., Ralph, P., Real, D., Riggins, C. W., Ruhsam, M., Sage, R. F., Sakai, A. K., Scascitella, M., Schilling, E. E., Schlösser, E.-M., Sederoff, H., Servick, S., Sessa, E. B., Shaw, A. J., Shaw, S. W., Sigel, E. M., Skema, C., Smith, A. G., Smithson, A., Stewart, C. N., Stinchcombe, J. R., Szövényi, P., Tate, J. A., Tiebel, H., Trapnell, D., Villegente, M., Wang, C.-N., Weller, S. G., Wenzel, M., Weststrand, S., Westwood, J. H., Whigham, D. F., Wu, S., Wulff, A. S., Yang, Y., Zhu, D., Zhuang, C., Zuidof, J., Chase, M. W., Pires, J. C., Rothfels, C. J., Yu, J., Chen, C., Chen, L., Cheng, S., Li, J., Li, R., Li, X., Lu, H., Ou, Y., Sun, X., Tan, X., Tang, J., Tian, Z., Wang, F., Wang, J., Wei, X., Xu, X., Yan, Z., Yang, F., Zhong, X., Zhou, F., Zhu, Y., Zhang, Y., Ayyampalayam, S., Barkman, T. J., Nguyen, N.-phuong, Matasci, N., Nelson, D. R., Sayyari, E., Wafula, E. K., Walls, R. L., Warnow, T., An, H., Arrigo, N., Baniaga, A. E., Galuska, S., Jorgensen, S. A., Kidder, T. I., Kong, H., Lu-Irving, P., Marx, H. E., Qi, X., Reardon, C. R., Sutherland, B. L., Tiley, G. P., Welles, S. R., Yu, R., Zhan, S., Gramzow, L., Theißen, G., Wong, G. K.-S. & Initiative, O. T. P. T. One thousand plant transcriptomes and the phylogenomics of green plants. Nature 574, 679–685 (2019).
12.
Zeitschriftenartikel
Lehwark, P. & Greiner, S. GB2sequin-A file converter preparing custom GenBank files for database submission. Genomics 111, 759–761 (2019).
13.
Zeitschriftenartikel
Sobanski, J., Giavalisco, P., Fischer, A., Kreiner, J. M., Walther, D., Schöttler, M. A., Pellizzer, T., Golczyk, H., Obata, T., Bock, R., Sears, B. B. & Greiner, S. Chloroplast competition is controlled by lipid biosynthesis in evening primroses. Proceedings of the National Academy of Sciences of the United States of America 116, 5665–5674 (2019).
14.
Zeitschriftenartikel
Tillich, M., Lehwark, P., Pellizzer, T., Ulbricht-Jones, E. S., Fischer, A., Bock, R. & Greiner, S. GeSeq - versatile and accurate annotation of organelle genomes. Nucleic Acids Research 45, W6–W11 (2017).
15.
Zeitschriftenartikel
Massouh, A., Schubert, J., Yaneva-Roder, L., Ulbricht-Jones, E. S., Zupok, A., Johnson, M. T. J., Wright, S. I., Pellizer, T., Sobanski, J., Bock, R. & Greiner, S. Spontaneous Chloroplast Mutants Mostly Occur by Replication Slippage and Show a Biased Pattern in the Plastome of Oenothera. The Plant Cell 28, 911–929 (2016).
16.
Zeitschriftenartikel
Agren, J. A., Greiner, S., Johnson, M. T. J. & Wright, S. I. No evidence that sex and transposable elements drive genome size variation in evening primroses. Evolution 69, 1053–1062 (2015).
17.
Zeitschriftenartikel
Hollister, J. D., Greiner, S., Wang, W., Wang, J., Zhang, Y., Wong, G. K.-S., Wright, S. I. & Johnson, M. T. J. Recurrent Loss of Sex Is Associated with Accumulation of Deleterious Mutations in Oenothera. Molecular Biology and Evolution 32, 896–905 (2015).
18.
Zeitschriftenartikel
Greiner, S., Sobanski, J. & Bock, R. Why are most organelle genomes transmitted maternally? Bioessays 37, 80–94 (2015).
19.
Zeitschriftenartikel
Greiner, S. & Koehl, K. I. Growing evening primroses (Oenothera). Frontiers in Plant Science 5, (2014).
20.
Zeitschriftenartikel
Golczyk, H., Greiner, S., Wanner, G., Weihe, A., Bock, R., Börner, T. & Herrmann, R. G. Chloroplast DNA in mature and senescing leaves - a reappraisal. The Plant Cell 26, 847–854 (2014).
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