Publications of A. R. Fernie

Hempstead, P. D.; Yewdall, S. J.; Fernie, A. R.; Lawson, D. M.; Artymiuk, P. J.; Rice, D. W.; Ford, G. C.; Harrison, P. M.: Comparison of the three-dimensional structures of recombinant human H and horse L ferritins at high resolution. Journal of Molecular Biology 268 (2), pp. 424 - 448 (1997)

Fernie, A. R.; Bauwe, H.; Weber, A. P.M. (Eds.): Photorespiration: Methods and Protocols. Humanapress, New York (2017), 274 pp.

Baginsky, S.; Fernie, A. R.: Plant Systems Biology. Birkhäuser Verlag, Basel, SUI (2007)

Alseekh, S.; Fernie, A. R.: Using Metabolomics to Assist Plant Breeding. In: Crop Breeding: Genetic Improvement Methods, Vol. 2264, pp. 33 - 46 (Ed. Tripodi, P.). Springer US, New York, NY (2021)

Bauwe, H.; Fernie, A. R.: With a Little Help from My Friends: The Central Role of Photorespiration and Related Metabolic Processes in the Acclimation and Adaptation of Plants to Oxygen and to Low-CO2 Stress. In: Photosynthesis, Respiration, and Climate Change, Vol. 48, pp. 355 - 385 (Eds. Becklin, K. M.; Ward, J. K.; Way, D. A.). Springer, Cham (2021)

Naake, T.; Gaquerel, E.; Fernie, A. R.: Annotation of Specialized Metabolites from High-Throughput and High Resolution Mass Spectrometry Metabolomics. In: Computational Methods and Data Analysis for Metabolomics, pp. 209 - 225 (Ed. Li, S.). Springer US, New York, NY (2020)

Llorente, C.; Jimenez, R.; Brotman, Y.; Fernie, A. R.; Sreenivasulu, N.; Jackie: Rice Grain Quality Benchmarking Through Profiling of Volatiles and Metabolites in Grains Using Gas Chromatography Mass Spectrometry. In: Rice Grain Quality: Methods and Protocols, Vol. 1892, pp. 187 - 199 (Ed. Sreenivasulu, N.). Springer New York, New York, NY (2019)

Alseekh, S.; Wu, S.; Brotman, Y.; Fernie, A. R.: Guidelines for Sample Normalization to Minimize Batch Variation for Large-Scale Metabolic Profiling of Plant Natural Genetic Variance. In: Methods in Molecular Biology, Vol. 1778, pp. 33 - 46 (Ed. António, C.). Humana Press, Clifton, N.J. (2018)

de Souza, L. P.; Fernie, A. R.; Tohge, T.: Carbon Atomic Survey for Identification of Selected Metabolic Fluxes. In: Methods in Molecular Biology, Vol. 1778, pp. 59 - 70 (Ed. António, C.). Humana Press, Clifton, N.J. (2018)

Vallarino, J. G.; Erban, A.; Fehrle, I.; Fernie, A. R.; Kopka, J.; Osorio, S.: Acquisition of Volatile Compounds by Gas Chromatography–Mass Spectrometry (GC-MS). In: Methods in Molecular Biology, Vol. 1778, pp. 225 - 240 (Ed. António, C.). Humana Press, Clifton, N.J. (2018)

Watanabe, M.; Tohge, T.; Balazadeh, S.; Erban, A.; Giavalisco, P.; Kopka, J.; Mueller-Roeber, B.; Fernie, A. R.; Hoefgen, R.: Comprehensive Metabolomics Studies of Plant Developmental Senescence. In: Plant Senescence: Methods and Protocols, pp. 339 - 358 (Ed. Guo, Y.). Springer New York, New York, NY (2018)

de Souza, L. P.; Szecowka, M.; Fernie, A. R.; Tohge, T.: 13CO2 labeling and mass spectral analysis of photorespiration. In: Methods in Molecular Biology, Vol. 1653, pp. 157 - 166. Humana Press, Clifton, N.J. (2017)

Del-Saz, N.F.; Ribas-Carbo, M.; Martorell, G.; Fernie, A. R.; Florez-Sarasa, I. D.: Measurements of electron partitioning between cytochrome and alternative oxidase pathways in plant tissues. In: Methods in Molecular Biology, Vol. 1670, pp. 203 - 217. Humana Press, Clifton, N.J. (2017)

Fernie, A. R.; Bauwe, H.; Sweetlove, L.J.: Investigating the role of the photorespiratory pathway in non-photosynthetic tissues. In: Methods in Molecular Biology, Vol. 1653, pp. 217 - 225. Humana Press, Clifton, N.J. (2017)

Fernie, A. R.; Tohge, T.: The Genetics of Plant Metabolism. In: Annual Review of Genetics, Vol. 51, pp. 287 - 310. Annual Reviews, Palo Alto (2017)

Obata, T.; Rosado-Souza, L.; Fernie, A. R.: Coupling radiotracer experiments with chemical fractionation for the estimation of respiratory fluxes. In: Methods in Molecular Biology, Vol. 1670, pp. 17 - 30. Humana Press, Clifton, N.J. (2017)

Omena-Garcia, R.P.; Araújo, W.L.; Gibon, Y.; Fernie, A. R.; Nunes-Nesi, A.: Measurement of tricarboxylic acid cycle enzyme activities in plants. In: Methods in Molecular Biology, Vol. 1670, pp. 167 - 182. Springer, New York, NY (2017)

Osorio, S.; Do, P. T.; Fernie, A. R.: Profiling Primary Metabolites of Tomato Fruit with Gas Chromatography/Mass Spectrometry. In: Plant Metabolomics: Methods and Protocols, 2012/02/29 Ed., pp. 101 - 110 (Eds. Hardy, N. W.; Hall, R. D.). Humana Press Inc., Totowa, NJ, USA (2012)

Osorio, S.; Fernie, A. R.: Plant Systems Biology. In: Systems Biology (Ed. Meyers, R. A.). Wiley-Blackwell (2012)

Fernie, A. R.; Keurentjes, J. J. B.: Genetics, genomics and metabolomics. In: The biology of plant metabolomics, 8, 2011/05/03 Ed., pp. 219 - 260 (Ed. Hall, R. D.). Blackwell-Wiley, London, UK (2011)