Publications of W. Weckwerth

Weckwerth, W.: Metabolomics - diagnostisches Tool und Schluesseltechnologie in der Systembiologie. Laborwelt, pp. 33 - 34 (2004)

Weckwerth, W.; Loureiro, M. E.; Wenzel, K.; Fiehn, O.: Differential metabolic networks unravel the effects of silent plant phenotypes. Proceedings of the National Academy of Sciences of the United States of America 101 (20), pp. 7809 - 7814 (2004)

Weckwerth, W.; Wenzel, K.; Fiehn, O.: Process for the integrated extraction identification, and quantification of metabolites, proteins and RNA to reveal their co-regulation in biochemical networks. Proteomics 4 (1), pp. 78 - 83 (2004)

Wienkoop, S.; Glinski, M.; Tanaka, N.; Tolstikov, V.; Fiehn, O.; Weckwerth, W.: Linking protein fractionation with multidimensional monolithic reversed-phase peptide chromatography/mass spectrometry enhances protein identification from complex mixtures even in the presence of abundant proteins. Rapid Communications in Mass Spectrometry 18 (6), pp. 643 - 650 (2004)

Wienkoop, S.; Zoeller, D.; Ebert, B.; Simon-Rosin, U.; Fisahn, J.; Glinski, M.; Weckwerth, W.: Cell-specific protein profiling in Arabidopsis thaliana trichomes: identification of trichome-located proteins involved in sulfur metabolism and detoxification. Phytochemistry 65 (11), pp. 1641 - 1649 (2004)

Fiehn, O.; Weckwerth, W.: Deciphering metabolic networks. European Journal of Biochemistry 270 (4), pp. 579 - 588 (2003)

Glinski, M.; Romeis, T.; Witte, C. P.; Wienkoop, S.; Weckwerth, W.: Stable isotope labeling of phosphopeptides for multiparallel kinase target analysis and identification of phosphorylation sites. Rapid Communications in Mass Spectrometry 17 (14), pp. 1579 - 1584 (2003)

Skiebe, P.; Dreger, M.; Boerner, J.; Meseke, M.; Weckwerth, W.: Immunocytochemical and molecular data guide peptide identification by mass spectrometry: Orcokinin and orcomyotropin-related peptides in the stomatogastric nervous system of several crustacean species. Cellular and Molecular Biology 49 (5), pp. 851 - 871 (2003)

Steuer, R.; Kurths, J.; Fiehn, O.; Weckwerth, W.: Observing and interpreting correlations in metabolomic networks. Bioinformatics 19 (8), pp. 1019 - 1026 (2003)

Weckwerth, W.: Metabolomics in systems biology. Annual Review of Plant Biology 54, pp. 669 - 689 (2003)

Weckwerth, W.; Selbig, J.: Scoring and identifying organism-specific functional patterns and putative phosphorylation sites in protein sequences using mutual information. Biochemical and Biophysical Research Communications 307 (3), pp. 516 - 521 (2003)

Schuster, S.; Klamt, S.; Weckwerth, W.; Moldenhauer, F.; Pfeiffer, T.: Use of network analysis of metabolic systems in bioengineering. Bioprocess and Biosystems Engineering 24 (6), pp. 363 - 372 (2002)

Weckwerth, W.; Fiehn, O.: Can we discover novel pathways using metabolomic analysis? Current Opinion in Biotechnology 13 (2), pp. 156 - 160 (2002)

Kose, F.; Weckwerth, W.; Linke, T.; Fiehn, O.: Visualizing plant metabolomic correlation networks using clique-metabolite matrices. Bioinformatics 17 (12), pp. 1198 - 1208 (2001)

Weckwerth, W.; Miyamoto, K.; Iinuma, K.; Krause, M.; Glinski, M.; Storm, T.; Bonse, G.; Kleinkauf, H.; Zocher, R.: Biosynthesis of PF1022A and related cyclooctadepsipeptides. Journal of Biological Chemistry 275 (23), pp. 17909 - 17915 (2000)

Weckwerth, W.; Willmitzer, L.; Fiehn, O.: Comparative quantification and identification of phosphoproteins using stable isotope labeling and liquid chromatography/mass spectrometry. Rapid Communications in Mass Spectrometry 14 (18), pp. 1677 - 1681 (2000)

Weckwerth, W.: Metabolomics: Methods and Protocols. Humana Press Inc., Totowa, NJ, USA (2007)

May, P.; Christian, N.; Ebenhoeh, O.; Weckwerth, W.; Walther, D.: Integration of proteomic and metabolomic profiling as well as metabolic modeling for the functional analysis of metabolic networks. In: Bioinformatics for Comparative Proteomics, 21, 2010/12/01 Ed., pp. 341 - 363 (Eds. Wu, C. H.; Chen, C.). Humana Press Inc., Totowa, NJ, USA (2011)

Kempa, S.; Walther, D.; Ebenhoeh, O.; Weckwerth, W.: Metabolic Engineering. In: Molecular Biology and Biotechnology, pp. 194 - 217 (Eds. Walker, J.; Rapley, R.). Royal Society of Chemistry (2009)

Morgenthal, K.; Wienkoop, S.; Wolschin, F.; Weckwerth, W.: Integrative profiling of metabolites and proteins: improving pattern recognition and biomarker selection for systems level approaches. In: Metabolomics: Methods and Protocols, pp. 57 - 75 (Ed. Weckwerth, W.). Humana Press Inc., Totowa, NJ, USA (2007)