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Krahmer, J.; Abbas, A.; Mengin, V.; Ishihara, H.; Romanowski, A.; Furniss, J. J.; Moraes, T. A.; Krohn, N.; Annunziata, M. G.; Feil, R. et al.; Alseekh, S.; Obata, T.; Fernie, A. R.; Stitt, M.; Halliday, K. J.: Phytochromes control metabolic flux, and their action at the seedling stage determines adult plant biomass. Journal of Experimental Botany 72 (8), pp. 3263 - 3278 (2021)

Lazare, S.; Bechar, D.; Garbowicz, K.; Fernie, A. R.; Brotman, Y.; Zaccai, M.: When vegetation indicates reproduction: the affinity between leaf morphology and flowering commitment in the lily meristem. Physiologia Plantarum (2021)

Liu, J.; Fernie, A. R.; Yan, J.: Crop breeding – From experience-based selection to precision design. Journal of Plant Physiology 256, 153313 (2021)

Luzarowski, M.; Vicente, R.; Kiselev, A.; Wagner, M.; Schlossarek, D.; Erban, A.; de Souza, L. P.; Childs, D.; Wojciechowska, I.; Luzarowska, U. et al.; Gorka, M.; Sokolowska, E.; Kosmacz, M.; Moreno, J.C.; Brzezinska, A.; Vegesna, B.; Kopka, J.; Fernie, A. R.; Willmitzer, L.; Ewald, J. C.; Skirycz, A.: Global mapping of protein–metabolite interactions in Saccharomyces cerevisiae reveals that Ser-Leu dipeptide regulates phosphoglycerate kinase activity. Communications Biology 4 (1), 181 (2021)

Martín-Pizarro, C.; Vallarino, J. G.; Osorio, S.; Meco, V.; Urrutia, M.; Pillet, J.; Casañal, A.; Merchante, C.; Amaya, I.; Willmitzer, L. et al.; Fernie, A. R.; Giovannoni, J. J.; Botella, M. A.; Valpuesta, V.; Posé, D.: The NAC transcription factor FaRIF controls fruit ripening in strawberry. The Plant Cell (2021)

Medeiros, D.B.; Brotman, Y.; Fernie, A. R.: The utility of metabolomics as a tool to inform maize biology. Plant Communications (2021)

Mou, J.; Zhang, Z.; Qiu, H.; Lu, Y.; Zhu, X.; Fan, Z.; Zhang, Q.; Ye, J.; Fernie, A. R.; Cheng, Y. et al.; Deng, X.; Wen, W.: Multiomics-based dissection of citrus flavonoid metabolism using a Citrus reticulata × Poncirus trifoliata population. Horticulture Research 8 (1), 56 (2021)

Omidbakhshfard, M. A.; Sokolowska, E.; Di Vittori, V.; de Souza, L. P.; Kuhalskaya, A.; Brotman, Y.; Alseekh, S.; Fernie, A. R.; Skirycz, A.: Multi-omics analysis of early leaf development in Arabidopsis thaliana. Patterns 2 (4), 100235 (2021)

Ren, Y.; Li, M.; Guo, S.; Sun, H.; Zhao, J.; Zhang, J.; Liu, G.; He, H.; Tian, S.; Yu, Y. et al.; Gong, G.; Zhang, H.; Zhang, X.; Alseekh, S.; Fernie, A. R.; Scheller, H. V.; Xu, Y.: Evolutionary Gain of Oligosaccharide Hydrolysis and Sugar Transport Enhanced Carbohydrate Partitioning in Sweet Watermelon Fruits. The Plant Cell (2021)

Sánchez-Guerrero, A.; Nadal, M.; Florez-Sarasa, I.; Ribas-Carbó, M.; Vallarino, J. G.; Brasi-Velasco, S. D.; Fernie, A. R.; Flexas, J.; Jiménez, A.; Sevilla, F.: Decreased Levels of Thioredoxin o1 Influences Stomatal Development and Aperture but Not Photosynthesis under Non-Stress and Saline Conditions. International Journal of Molecular Sciences 22 (3), 1063 (2021)

Schulz, E.; Tohge, T.; Winkler, J. B.; Albert, A.; Schäffner, A. R.; Fernie, A. R.; Zuther, E.; Hincha, D. K.: Natural Variation among Arabidopsis Accessions in the Regulation of Flavonoid Metabolism and Stress Gene Expression by Combined UV Radiation and Cold. Plant and Cell Physiology (2021)

Scossa, F.; Alseekh, S.; Fernie, A. R.: Integrating multi-omics data for crop improvement. Journal of Plant Physiology 257, 153352 (2021)

Scossa, F.; Fernie, A. R.: Ancestral sequence reconstruction - An underused approach to understand the evolution of gene function in plants? Computational and Structural Biotechnology Journal 19, pp. 1579 - 1594 (2021)

Shen, S.; Peng, M.; Fang, H.; Wang, Z.; Zhou, S.; Jing, X.; Zhang, M.; Yang, C.; Guo, H.; Li, Y. et al.; Lei, L.; Shi, Y.; Sun, Y.; Liu, X.; Xu, C.; Tohge, T.; Yuan, M.; Fernie, A. R.; Ning, Y.; Wang, G.; Luo, J.: An Oryza-specific hydroxycinnamoyl tyramine gene cluster contributes to enhanced disease resistance. Science Bulletin (2021)

Staykov, N. S.; Angelov, M.; Petrov, V.; Minkov, P.; Kanojia, A.; Guinan, K. J.; Alseekh, S.; Fernie, A. R.; Sujeeth, N.; Gechev, T. S.: An Ascophyllum nodosum-Derived Biostimulant Protects Model and Crop Plants from Oxidative Stress. Metabolites 11 (1), 24 (2021)

Tiozon, R.J.N.; Fernie, A. R.; Sreenivasulu, N.: Meeting human dietary vitamin requirements in the staple rice via strategies of biofortification and post-harvest fortification. Trends in Food Science and Technology 109, pp. 65 - 82 (2021)

Wu, S.; Alseekh, S.; Brotman, Y.; Fernie, A. R.: Metabolomic Analysis of Natural Variation in Arabidopsis. Methods in Molecular Biology 2200, pp. 393 - 411 (2021)

Yan, S.; Liu, Q.; Naake, T.; Huang, W.; Chen, M.; Kong, Q.; Zhang, S.; Li, W.; Li, X.; Liu, Q. et al.; Yang, J.; Fernie, A. R.; Liu, B.: OsGF14b modulates defense signaling pathways in rice panicle blast response. Crop Journal (2021)

Yoshida, T.; Fernie, A. R.; Shinozaki, K.; Takahashi, F.: Long-distance stress and developmental signals associated with abscisic acid signaling in environmental responses. The Plant Journal 105 (2 - SI), pp. 477 - 488 (2021)

Zhang, W.; Luo, C.; Scossa, F.; Zhang, Q.; Usadel, B.; Fernie, A. R.; Mei, H.; Wen, W.: A phased genome based on single sperm sequencing reveals crossover pattern and complex relatedness in tea plants. The Plant Journal 105 (1), pp. 197 - 208 (2021)