Publications of A. R. Fernie

Klie, S.; Osorio, S.; Tohge, T.; Drincovich, M. F.; Fait, A.; Giovannoni, J. J.; Fernie, A. R.; Nikoloski, Z.: Conserved Changes in the Dynamics of Metabolic Processes during Fruit Development and Ripening across Species. Plant Physiology 164 (1), pp. 55 - 68 (2014)

Koenig, A. G.; Hartl, M.; Pham, P. A.; Laxa, M.; Boersema, P.; Orwat, A.; Kalitventseva, I.; Ploechinger, M.; Braun, H. P.; Leister, D. et al.; Mann , M.; Wachter, A.; Fernie, A. R.; Finkemeier, I.: The Arabidopsis class II sirtuin is a lysine deacetylase and interacts with mitochondrial energy metabolism. Plant Physiology 164, pp. 1406 - 1412 (2014)

Lohse, M.; Nagel, A.; Herter, T.; May, P.; Schroda, M.; Zrenner, R.; Tohge, T.; Fernie, A. R.; Stitt, M.; Usadel, B.: Mercator: a fast and simple web server for genome scale functional annotation of plant sequence data. Plant Cell Environment 37 (5), pp. 1250 - 1258 (2014)

Malinova, I.; Kunz, H.-H.; Alseekh, S.; Herbst, K.; Fernie, A. R.; Gierth, M.; Fettke, J.: Reduction of the Cytosolic Phosphoglucomutase in Arabidopsis Reveals Impact on Plant Growth, Seed and Root Development, and Carbohydrate Partitioning. PLoS One 9 (11), e112468 (2014)

Nunes-Nesi, A.; Florian, A.; Howden, A.; Jahnke, K.; Timm, S.; Bauwe, H.; Sweetlove, L.; Fernie, A. R.: Is There a Metabolic Requirement for Photorespiratory Enzyme Activities in Heterotrophic Tissues? Molecular Plant 7 (1), pp. 248 - 251 (2014)

Quadrana, L.; Almeida, J.; Asis, R.; Duffy, T.; Dominguez, P. G.; Bermudez, L.; Conti, G.; da Silva, J. V. C.; Peralta, I. E.; Colot, V. et al.; Asurmendi, S.; Fernie, A. R.; Rossi, M.; Carrari, F.: Natural occurring epialleles determine vitamin E accumulation in tomato fruits. Nature Communications 5, 4027 (2014)

Ruprecht, C.; Tohge, T.; Fernie, A. R.; Mortimer, C. L.; Kozlo, A.; Fraser, P. D.; Funke, N.; Cesarino, I.; Vanholme, R.; Boerjan, W. et al.; Morreel, K.; Burgert, I.; Gierlinger, N.; Bulone, V.; Schneider, V.; Stockero, A.; Navarro, J. P.; Pudel, F.; Tambuyser, B.; Hygate, J.; Bumstead, J.; Notley, L.; Persson, S.: Transcript and Metabolite Profiling for the Evaluation of Tobacco Tree and Poplar as Feedstock for the Bio-based Industry. Journal of visualized experiments: JoVE (87), e51393 (2014)

Sade, D.; Sade, N.; Shriki, O.; Lerner, S.; Gebremedhin, A.; Karavani, A.; Brotman, Y.; Osorio, S.; Fernie, A. R.; Willmitzer, L. et al.; Czosnek, H.; Moshelion, M.: Water Balance, Hormone Homeostasis, and Sugar Signaling Are All Involved in Tomato Resistance to Tomato Yellow Leaf Curl Virus. Plant Physiology 165 (4), pp. 1684 - 1697 (2014)

Schmitz, J.; Heinrichs, L.; Scossa, F.; Fernie, A. R.; Oelze, M.-L.; Dietz, K.-J.; Rothbart, M.; Grimm, B.; Fluegge, U.-I.; Haeusler, R. E.: The essential role of sugar metabolism in the acclimation response of Arabidopsis thaliana to high light intensities. Journal of Experimental Botany 65 (6), pp. 1619 - 1636 (2014)

Schroeder, F.; Lisso, J.; Obata, T.; Erban, A.; Maximova, E.; Giavalisco, P.; Kopka, J.; Fernie, A. R.; Willmitzer, L.; Muessig, C.: Consequences of induced brassinosteroid deficiency in Arabidopsis leaves. BMC Plant Biology 14, 309 (2014)

Toepfer, N.; Scossa, F.; Fernie, A. R.; Nikoloski, Z.: Variability of Metabolite Levels Is Linked to Differential Metabolic Pathways in Arabidopsis's Responses to Abiotic Stresses. PLoS Computational Biology 10 (6), e1003656 (2014)

Tohge, T.; de Souza, L. P.; Fernie, A. R.: Genome‐enabled plant metabolomics. Journal of Chromatography B: Analytical Technologies in the Biomedical and Life Sciences 966, pp. 7 - 20 (2014)

Tohge, T.; Obata, T.; Fernie, A. R.: Biosynthesis of the Essential Respiratory Cofactor Ubiquinone from Phenylalanine in Plants. Molecular Plant 7 (9), pp. 1403 - 1405 (2014)

Wallström, S. V.; Florez-Sarasa, I.; Araujo, W. L.; Aidemark, M.; Fernández-Fernández, M.; Fernie, A. R.; Ribas-Carbó, M.; Rasmusson, A. G.: Suppression of the External Mitochondrial NADPH Dehydrogenase, NDB1, in Arabidopsis thaliana Affects Central Metabolism and Vegetative Growth. Molecular Plant 7 (2), pp. 356 - 368 (2014)

Wang, L.; Czedik-Eysenberg, A.; Mertz, R. A.; Si, Y.; Tohge, T.; Nunes-Nesi, A.; Arrivault, S.; Dedow, L. K.; Bryant, D. W.; Zhou, W. et al.; Xu, J.; Weissmann, S.; Studer, A.; Li, P.; Zhang, C.; LaRue, T.; Shao, Y.; Ding, Z.; Sun, Q.; Patel, R. V.; Turgeon, R.; Zhu, X.; Provart, N. J.; Mockler, T. C.; Fernie, A. R.; Stitt, M.; Liu, P.; Brutnell, T. P.: Comparative analyses of C-4 and C-3 photosynthesis in developing leaves of maize and rice. Nature biotechnology 32 (11), pp. 1158 - 1165 (2014)

Zhang, Y.; Sun, F.; Fettke, J.; Schöttler, M. A.; Ramsden, L.; Fernie, A. R.; Lim, B. L.: Heterologous expression of AtPAP2 in transgenic potato influences carbon metabolism and tuber development. FEBS Letters 588 (20), pp. 3726 - 3731 (2014)

Benina, M.; Obata, T.; Mehterov, N.; Ivanov, I.; Petrov, V.; Toneva, V.; Fernie, A. R.; Gechev, T. S.: Comparative metabolic profiling of Haberlea rhodopensis, Thellungiella halophyla, and Arabidopsis thaliana exposed to low temperature. Frontiers in Plant Science 4, 499 (2013)

Malinova, I.; Mahlow, S.; Alseekh, S.; Orawetz, T.; Fernie, A. R.; Baumann, O.; Steup, M.; Fettke, J.: Double knock-out mutants of Arabidopsis thaliana grown under normal conditions reveal that the plastidial phosphorylase isozyme (PHS1) participates in transitory starch metabolism. Plant Physiology 164 (2), pp. 907 - 921 (2013)

Muñoz-Bertomeu , J.; Anoman, A.; Flores-Tornero, M.; Toujani, W.; Rosa-Téllez, S.; Fernie, A. R.; Roje, S.; Segura , J.; Ros, R.: The essential role of the phosphorylated pathway of serine biosynthesis in Arabidopsis. Plant Signaling & Behavior 8 (11), e27104 (2013)

Nardozza, S.; Boldingh, H. L.; Osorio, S.; Höhne, M.; Wohlers, M.; Gleave, A. P.; MacRae, E. A.; Richardson, A. C.; Atkinson, R. G.; Sulpice, R. et al.; Fernie, A. R.; Clearwater, M. J.: Metabolic analysis of kiwifruit (Actinidia deliciosa) berries from extreme genotypes reveals hallmarks for fruit starch metabolism. Journal of Experimental Botany 64 (16), pp. 5049 - 5063 (2013)