Publications of A. R. Fernie

Tiozon, R. J. N.; Alseekh, S.; Fernie, A. R.; Bonto, A. P.; Yu, J.; Buenafe, R. J. Q.; Sreenivasulu, N.: Comprehensive lipidomic insights of differentially accumulating lipids in large pigmented rice sprout collection and the changes in the starch composition upon germination. Food Chemistry 460 (Part 2), 140677 (2024)

Wijesingha Ahchige, M.; Fisher, J.; Sokolowska, E.; Lyall, R.; Illing, N.; Skirycz, A.; Zamir, D.; Alseekh, S.; Fernie, A. R.: The variegated canalized-1 tomato mutant is linked to photosystem assembly. Computational and Structural Biotechnology Journal 23, pp. 3967 - 3988 (2024)

Farag, M.; Baky, M.; Kuehnhold, H.; Kriege, E.; Kunzmann, A.; Alseekh, S.; Al-Hammady, M.; Ezz, S.; Fernie, A. R.; Westphal, H. et al.; Stuhr, M.: Effects of thermal and UV stress on the polar and non-polar metabolome of photosymbiotic jellyfish and sea anemones. Marine Pollution Bulletin 208, 116983 (2024)

Huang, X.; He, Y.; Zhang, K.; Shi, Y.; Zhao, H.; Lai, D.; Lin, H.; Wang, X.; Yang, Z.; Xiao, Y. et al.; Li, W.; Ouyang, Y.; Woo, S.H.; Quinet, M.; Georgiev, M.I.; Fernie, A. R.; Liu, X.; Zhou, M.: Evolution and Domestication of a Novel Biosynthetic Gene Cluster Contributing to the Flavonoid Metabolism and High-Altitude Adaptability of Plants in the Fagopyrum Genus. Advanced Science 11 (43), 2403603 (2024)

Liu, F.; Fernie, A. R.; Zhang, Y.: Can a nitrogen-fixing organelle be engineered within plants? Trends in Plant Science 29 (11), pp. 1168 - 1171 (2024)

Che, Y.; Ding, Z.; Shen, C.; Fernie, A. R.; Tang, X.; Yao, Y.; Liu, J.; Wang, Y.; Li, R.; Guo, J.: Physiological and Microstructure Analysis Reveals the Mechanism by Which Formic Acid Delays Postharvest Physiological Deterioration of Cassava. Antioxidants: open access journal 13 (10), 1245 (2024)

El-Shiekh, R. A.; Elshimy, R.; Mandour, A. A.; Kassem, H. A. H.; Khaleel, A. E.; Alseekh, S.; Fernie, A. R.; Salem, M. A.: Phytochemical characterisation of leaves and stems of Murraya koenigii (L.) Sprengel and Murraya paniculata (L.) Jack and their antibacterial activity against multidrug-resistant Acinetobacter baumannii bacterial infection. International journal of food science & technology 59 (10), pp. 7998 - 8010 (2024)

Naake, T.; D'Auria, J.; Fernie, A. R.; Scossa, F.: Phylogenomic and synteny analysis of BAHD and SCP/SCPL gene families reveal their evolutionary histories in plant specialized metabolism. Philosophical Transactions of the Royal Society of London, Series B: Biological Sciences 379 (1914), 20230349 (2024)

Rüscher, D.; Vasina, V. V.; Knoblauch, J.; Bellin, L.; Pommerrenig, B.; Alseekh, S.; Fernie, A. R.; Neuhaus, H. E.; Knoblauch, M.; Sonnewald, U. et al.; Zierer, W.: Symplasmic phloem loading and subcellular transport in storage roots are key factors for carbon allocation in cassava. Plant Physiology 196 (2), pp. 1322 - 1339 (2024)

Tóth, D.; Tengölics, R.; Aarabi, F.; Karlsson, A.; Vidal-Meireles, A.; Kovács, L.; Kuntam, S.; Körmöczi, T.; Fernie, A. R.; Hudson, E. P. et al.; Papp, B.; Tóth, S. Z.: Chloroplastic ascorbate modifies plant metabolism and may act as a metabolite signal regardless of oxidative stress. Plant Physiology 196 (2), pp. 1691 - 1711 (2024)

Dorrell, R. G.; Zhang, Y.; Liang, Y.; Gueguen, N.; Nonoyama, T.; Croteau, D.; Penot, M.; Adiba, S.; Bailleul, B.; Gros, V. et al.; Karlusich, P.; José, J.; Zweig, N.; Fernie, A. R.; Jouhet, J.; Maréchal, E.; Bowler, C.: Complementary environmental analysis and functional characterization of lower glycolysis-gluconeogenesis in the diatom plastid. The Plant Cell 36 (9), pp. 3584 - 3610 (2024)

Fu, C.-C.; Huang, B.-X.; Wang, S.-S.; Song, Y.-C.; Metok, D.; Tan, Y.-X.; Fan, T.-P.; Fernie, A. R.; Zargar, M.; Wang, Y. et al.; Chen, M.-X.; Yu, L.-W.; Zhu, F.-Y.: Deciphering the roles of bacterial and fungal communities in the formation and quality of agarwood. Stress Biology 4, 40 (2024)

von Steimker, J.; Tripodi, P.; Wendenburg, R.; Tringovska, I.; Nankar, A. N.; Stoeva, V.; Pasev, G.; Klemmer, A.; Todorova, V.; Bulut, M. et al.; Tikunov, Y.; Bovy, A.; Gechev, T.; Kostova, D.; Fernie, A. R.; Alseekh, S.: The genetic architecture of the pepper metabolome and the biosynthesis of its signature capsianoside metabolites. Current Biology 34 (18), pp. 4209 - 4223 (2024)

Badoni, S.; Pasion-Uy, E. A.; Kor, S.; Kim, S.-R.; Tiozon, R. J. N.; Misra, G.; Buenafe, R. J. Q.; Labarga, L. M.; Ramos-Castrosanto, A. R.; Pratap, V. et al.; Slamet-Loedin, I.; von Steimker, J.; Alseekh, S.; Fernie, A. R.; Kohli, A.; Khush, G. S.; Sreenivasulu, N.: Multiomics of a rice population identifies genes and genomic regions that bestow low glycemic index and high protein content. Proceedings of the National Academy of Sciences of the United States of America 121 (36), e2410598121 (2024)

Gutschker, S.; Ruescher, D.; Rabbi, I.Y.; Rosado-Souza, L.; Pommerrenig, B.; Pauly, M.; Robertz, S.; van Doorn, A.M.; Schlereth, A.; Neuhaus, H.E. et al.; Fernie, A. R.; Reinert, S.; Sonnewald, U.; Zierer, W.: Carbon usage in yellow-fleshed Manihot esculenta storage roots shifts from starch biosynthesis to cell wall and raffinose biosynthesis via the myo-inositol pathway. The Plant Journal 119 (4), pp. 2045 - 2062 (2024)

Hayashi, K.; Fernie, A. R.: A neat wheat trick to hide genes from selection. Trends in Plant Science 29 (8), pp. 837 - 838 (2024)

Liu, Y.; Li, H.; Liu, J.; Wang, Y.; Jiang, C.; Zhou, Z.; Zhuo, L.; Li, W.; Fernie, A. R.; Jackson, D. et al.; Yan, J.; Luo, Y.: The additive function of YIGE2 and YIGE1 in regulating maize ear length. The Plant Journal 119 (3), pp. 1327 - 1335 (2024)

Singh, P.; Kumari, A.; Khaladhar, V.C.; Singh, N.; Pathak, P.K.; Kumar, V.; Kumar, R.J.; Jain, P.; Thakur, J.K.; Fernie, A. R. et al.; Bauwe, H.; Raghavendra, A.S.; Gupta, K.J.: Serine hydroxymethyltransferase6 is involved in growth and resistance against pathogens via ethylene and lignin production in Arabidopsis. The Plant Journal 119 (4), pp. 1920 - 1936 (2024)

Tariq, A.; Meng, M.; Jiang, X.; Bolger, A.; Beier, S.; Buchmann, J.P.; Fernie, A. R.; Wen, W.; Usadel, B.: In-depth exploration of the genomic diversity in tea varieties based on a newly constructed pangenome of Camellia sinensis. The Plant Journal 119 (4), pp. 2096 - 2115 (2024)

Yang, C.; Shen, S.; Zhan, C.; Li, Y.; Zhang, R.; Lv, Y.; Yang, Z.; Zhou, J.; Shi, Y.; Liu, X. et al.; Shi, J.; Zhang, D.; Fernie, A. R.; Luo, J.: Variation in a Poaceae-conserved fatty acid metabolic gene cluster controls rice yield by regulating male fertility. Nature Communications 15 (1), 6663 (2024)