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Journal Article (16)

Journal Article
Sienkiewicz-Porzucek, A.; Sulpice, R.; Osorio, S.; Krahnert, I.; Leisse, A.; Urbanczyk-Wochniak, E.; Hodges, M.; Fernie, A. R.; Nunes-Nesi, A.: Mild Reductions in Mitochondrial NAD-Dependent Isocitrate Dehydrogenase Activity Result in Altered Nitrate Assimilation and Pigmentation But Do Not Impact Growth. Molecular Plant 3 (1), pp. 156 - 173 (2010)
Journal Article
Oliver, S. N.; Lunn, J. E.; Urbanczyk-Wochniak, E.; Lytovchenko, A.; van Dongen, J. T.; Faix, B.; Schmalzlin, E.; Fernie, A. R.; Geigenberger, P.: Decreased Expression of Cytosolic Pyruvate Kinase in Potato Tubers Leads to a Decline in Pyruvate Resulting in an in Vivo Repression of the Alternative Oxidase. Plant Physiology 148 (3), pp. 1640 - 1654 (2008)
Journal Article
Sienkiewicz-Porzucek, A.; Nunes-Nesi, A.; Sulpice, R.; Lisec, J.; Centeno, D. C.; Carillo, P.; Leisse, A.; Urbanczyk-Wochniak, E.; Fernie, A. R.: Mild reductions in mitochondrial citrate synthase activity result in a compromised nitrate assimilation and reduced leaf pigmentation but have no effect on photosynthetic performance or growth. Plant Physiology 147 (1), pp. 115 - 127 (2008)
Journal Article
Lemaitre, T.; Urbanczyk-Wochniak, E.; Flesch, V.; Bismuth, E.; Fernie, A. R.; Hodges, M.: NAD-dependent isocitrate dehydrogenase mutants of arabidopsis suggest the enzyme is not limiting for nitrogen assimilation. Plant Physiology 144 (3), pp. 1546 - 1558 (2007)
Journal Article
Carrari, F.; Baxter, C.; Usadel, B.; Urbanczyk-Wochniak, E.; Zanor, M. I.; Nunes-Nesi, A.; Nikiforova, V.; Centero, D.; Ratzka, A.; Pauly, M. et al.; Sweetlove, L. J.; Fernie, A. R.: Integrated analysis of metabolite and transcript levels reveals the metabolic shifts that underlie tomato fruit development and highlight regulatory aspects of metabolic network behavior. Plant Physiology 142 (4), pp. 1380 - 1396 (2006)
Journal Article
Clement, B.; Pollmann, S.; Weiler, E.; Urbanczyk-Wochniak, E.; Otten, L.: The Agrobacterium vitis T-6b oncoprotein induces auxin-independent cell expansion in tobacco. Plant Journal 45 (6), pp. 1017 - 1027 (2006)
Journal Article
Fait, A.; Angelovici, R.; Less, H.; Ohad, I.; Urbanczyk-Wochniak, E.; Fernie, A. R.; Galili, G.: Arabidopsis seed development and germination is associated with temporally distinct metabolic switches. Plant Physiology 142 (3), pp. 839 - 854 (2006)
Journal Article
Urbanczyk-Wochniak, E.; Usadel, B.; Thimm, O.; Nunes-Nesi, A.; Carrari, F.; Davy, M.; Blaesing, O.; Kowalczyk, M.; Weicht, D.; Polinceusz, A. et al.; Meyer, S.; Stitt, M.; Fernie, A. R.: Conversion of MapMan to allow the analysis of transcript data from Solanaceous species: Effects of genetic and environmental alterations in energy metabolism in the leaf. Plant Molecular Biology 60 (5), pp. 773 - 792 (2006)
Journal Article
Davies, H. V.; Shepherd, L. V. T.; Burrell, M. M.; Carrari, F.; Urbanczyk-Wochniak, E.; Leisse, A.; Hancock, R. D.; Taylor, M.; Viola, R.; Ross, H. et al.; McRae, D.; Willmitzer, L.; Fernie, A. R.: Modulation of fructokinase activity of potato (Solanum tuberosum) results in substantial shifts in tuber metabolism. Plant and Cell Physiology 46 (7), pp. 1103 - 1115 (2005)
Journal Article
Geigenberger, P.; Regierer, B.; Nunes-Nesi, A.; Leisse, A.; Urbanczyk-Wochniak, E.; Springer, F.; van Dongen, J. T.; Kossmann, J.; Fernie, A. R.: Inhibition of de novo pyrimidine synthesis in growing potato tubers leads to a compensatory stimulation of the pyrimidine salvage pathway and a subsequent increase in biosynthetic performance. Plant Cell 17 (7), pp. 2077 - 2088 (2005)
Journal Article
Urbanczyk-Wochniak, E.; Baxter, C.; Kolbe, A.; Kopka, J.; Sweetlove, L. J.; Fernie, A. R.: Profiling of diurnal patterns of metabolite and transcript abundance in potato (Solanum tuberosum) leaves. Planta 221 (6), pp. 891 - 903 (2005)
Journal Article
Urbanczyk-Wochniak, E.; Fernie, A. R.: Metabolic profiling reveals altered nitrogen nutrient regimes have diverse effects on the metabolism of hydroponically-grown tomato (Solanum lycopersicum) plants. Journal of Experimental Botany 56 (410), pp. 309 - 321 (2005)
Journal Article
Carrari, F.; Urbanczyk-Wochniak, E.; Willmitzer, L.; Fernie, A. R.: Engineering central metabolism in crop species: learning the system. Metabolic Engineering 5 (3), pp. 191 - 200 (2003)
Journal Article
Roessner-Tunali, U.; Urbanczyk-Wochniak, E.; Czechowski, T.; Kolbe, A.; Willmitzer, L.; Fernie, A. R.: De novo amino acid biosynthesis in potato tubers is regulated by sucrose levels. Plant Physiology 133 (2), pp. 683 - 692 (2003)
Journal Article
Urbanczyk-Wochniak, E.; Leisse, A.; Roessner-Tunali, U.; Lytovchenko, A.; Reismeier, J.; Willmitzer, L.; Fernie, A. R.: Expression of a bacterial xylose isomerase in potato tubers results in an altered hexose composition and a consequent induction of metabolism. Plant and Cell Physiology 44 (12), pp. 1359 - 1367 (2003)
Journal Article
Urbanczyk-Wochniak, E.; Luedemann, A.; Kopka, J.; Selbig, J.; Roessner-Tunali, U.; Willmitzer, L.; Fernie, A. R.: Parallel analysis of transcript and metabolic profiles: a new approach in systems biology. EMBO Reports 4 (10), pp. 989 - 993 (2003)

Book Chapter (2)

Book Chapter
Urbanczyk-Wochniak, E.; Willmitzer, L.; Fernie, A. R.: Integrating profiling data: using linear correlation to reveal coregulation of transcript and metabolites. In: Metabolomics: Methods and Protocols, pp. 77 - 85 (Ed. Weckwerth, W.). Humana Press Inc., Totowa, NJ, USA (2007)
Book Chapter
Urbanczyk-Wochniak, E.; Fernie, A. R.; Willmitzer, L.: The utility of transcriptomics and metabolomics in systems based analysis of plant metabolism. In: Understanding the Plant Genome. (Ed. Sadowski, J.). Institute of Plant Genetics, PAS, Poznan, POL (2004)

Conference Paper (1)

Conference Paper
Urbanczyk-Wochniak, E.; Baxter, C.; Sweetlove, L. J.; Fernie, A. R.: Profiling diurnal changes in metabolite and transcript levels in potato leaves. In: 3rd International Congress on Plant Metabolomics, pp. 183 - 192. 3rd International Congress on Plant Metabolomics, Iowa State Univ, Ames, IA. (2007)

Meeting Abstract (1)

Meeting Abstract
Urbanczyk-Wochniak, E.; Willmitzer, L.; Fernie, A. R.: mRNA Analysis of Plant Metabolic Regulation: Comparison of Transcript and Metabolic Complements of Developing Plant Tissues. In Acta Physiologiae Plantarum, 26 (3), p. 55 - 55. (2004)
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