Publications of Z. Nikoloski
All genres
Journal Article (195)
141.
Journal Article
9 (8), pp. 1803 - 1824 (2014)
Flux profiling of photosynthetic carbon metabolism in intact plants. Nature Protocols 142.
Journal Article
4, 5067 (2014)
Metabolic variation between japonica and indica rice cultivars as revealed by non-targeted metabolomics. Scientific Reports 143.
Journal Article
9 (8), e103637 (2014)
Concurrent Conditional Clustering of Multiple Networks: COCONETS. PLoS One 144.
Journal Article
21 (6), pp. 428 - 445 (2014)
Biological Cluster Evaluation for Gene Function Prediction. Journal of Computational Biology 145.
Journal Article
164 (1), pp. 55 - 68 (2014)
Conserved Changes in the Dynamics of Metabolic Processes during Fruit Development and Ripening across Species. Plant Physiology 146.
Journal Article
4 (32), pp. 16777 - 16781 (2014)
From systems biology to systems chemistry: metabolomic procedures enable insight into complex chemical reaction networks in water. RSC Advances 147.
Journal Article
26 (6), pp. 2310 - 2350 (2014)
Systems Analysis of the Response of Photosynthesis, Metabolism, and Growth to an Increase in Irradiance in the Photosynthetic Model Organism Chlamydomonas reinhardtii. The Plant Cell 148.
Journal Article
289 (44), pp. 30387 - 30403 (2014)
Metabolite Profiling and Integrative Modeling Reveal Metabolic Constraints for Carbon Partitioning under Nitrogen Starvation in the Green Algae Haematococcus pluvialis. The Journal of Biological Chemistry 149.
Journal Article
10 (6), e1003656 (2014)
Variability of Metabolite Levels Is Linked to Differential Metabolic Pathways in Arabidopsis's Responses to Abiotic Stresses. PLoS Computational Biology 150.
Journal Article
9 (12), e1003368 (2013)
Structural control of metabolic flux. PLoS Computational Biology 151.
Journal Article
13 (184) (2013)
Metabolic profiling and network analysis reveal coordinated changes in grapevine water stress response. BMC Plant Biology 152.
Journal Article
8 (9), e25480 (2013)
Large-scale modeling provides insights into Arabidopsis's acclimation to changing light and temperature conditions. Plant Signaling & Behavior 153.
Journal Article
25 (6), pp. 1917 - 1927 (2013)
Data Integration through Proximity-Based Networks Provides Biological Principles of Organization across Scales. The Plant Cell 154.
Journal Article
25 (4), pp. 1197 - 1211 (2013)
Integration of Genome-Scale Modeling and Transcript Profiling Reveals Metabolic Pathways Underlying Light and Temperature Acclimation in Arabidopsis. The Plant Cell 155.
Journal Article
317, pp. 359 - 365 (2013)
On the relation between reactions and complexes of (bio)chemical reaction networks. Journal of Theoretical Biology 156.
Journal Article
8 (5), p. e62974 (2013)
Network-Based Segmentation of Biological Multivariate Time Series. PLoS One 157.
Journal Article
162 (1), pp. 347 - 363 (2013)
Impact of the carbon and nitrogen supply on relationships and connectivity between metabolism and biomass in a broad panel of Arabidopsis accessions. Plant Physiology 158.
Journal Article
25 (2), pp. 694 - 714 (2013)
Metabolic Fluxes in an Illuminated Arabidopsis Rosette. The Plant Cell 159.
Journal Article
8 (11), e79909 (2013)
Genome-Wide Identification of Regulatory Elements and Reconstruction of Gene Regulatory Networks of the Green Alga Chlamydomonas reinhardtii under Carbon Deprivation. PLoS One 160.
Journal Article
8 (9), e73061 (2013)
The Investment in Scent: Time-Resolved Metabolic Processes in Developing Volatile-Producing Nigella sativa L. Seeds. PLoS One