Publications of Z. Nikoloski
All genres
Journal Article (188)
41.
Journal Article
31 (15), pp. 3262 - 3274 (2021)
KATANIN and CLASP function at different spatial scales to mediate microtubule response to mechanical stress in Arabidopsis cotyledons. Current Biology 42.
Journal Article
12 (1), 458 (2021)
A network-based framework for shape analysis enables accurate characterization of leaf epidermal cells. Nature Communications 43.
Journal Article
22 (9), 4790 (2021)
Comparative analysis based on transcriptomics and metabolomics data reveal differences between emmer and durum wheat in response to nitrogen starvation. International Journal of Molecular Sciences 44.
Journal Article
11 (1), 17415 (2021)
A structural property for reduction of biochemical networks. Scientific Reports 45.
Journal Article
37 (18), pp. 2896 - 2904 (2021)
L2,1-norm regularized multivariate regression model with applications to genomic prediction. Bioinformatics 46.
Journal Article
37 (1), pp. 73 - 81 (2021)
PC2P: parameter-free network-based prediction of protein complexes. Bioinformatics 47.
Journal Article
11 (1), 4787 (2021)
Integration of relative metabolomics and transcriptomics time-course data in a metabolic model pinpoints effects of ribosome biogenesis defects on Arabidopsis thaliana metabolism. Scientific Reports 48.
Journal Article
19, pp. 2170 - 2178 (2021)
Combination of network and molecule structure accurately predicts competitive inhibitory interactions. Computational and Structural Biotechnology Journal 49.
Journal Article
11, 8544 (2021)
Reaction lumping in metabolic networks for application with thermodynamic metabolic flux analysis. Scientific Reports 50.
Journal Article
257, 153354 (2021)
Machine learning approaches for crop improvement: Leveraging phenotypic and genotypic big data. Journal of Plant Physiology 51.
Journal Article
36 (9), pp. 2950 - 2951 (2020)
CytoSeg 2.0: automated extraction of actin filaments. Bioinformatics 52.
Journal Article
43 (6), pp. 1376 - 1393 (2020)
Low temperature tolerance of the Antarctic species Deschampsia antarctica: a complex metabolic response associated with nutrient remobilization. Plant, Cell and Environment 53.
Journal Article
Model-assisted identification of metabolic engineering strategies for Jatropha curcas lipid pathways. The Plant Journal (accepted)
54.
Journal Article
80, 101051 (2020)
Towards model-driven characterization and manipulation of plant lipid metabolism. Progress in Lipid Research 55.
Journal Article
103 (6), pp. 2168 - 2177 (2020)
Characterization of maximal enzyme catalytic rates in central metabolism of Arabidopsis thaliana. The Plant Journal 56.
Journal Article
21 (23), pp. 1 - 27 (2020)
Comparative analysis of ros network genes in extremophile eukaryotes. International Journal of Molecular Sciences 57.
Journal Article
5 (2), e20106 (2020)
Supervised Learning of Gene Regulatory Networks. Current Protocols in Plant Biology 58.
Journal Article
16 (4), e1007832 (2020)
Flux-based hierarchical organization of Escherichia coli’s metabolic network. PLoS Computational Biology 59.
Journal Article
11 (1), 2410 (2020)
Integrating molecular markers into metabolic models improves genomic selection for Arabidopsis growth. Nature Communications 60.
Journal Article
266, pp. 283 - 290 (2019)
Coherent network partitions. Discrete applied mathematics