Publications of the Group

Journal Article (13)

Journal Article
Li, X.; Deng, D.; Cataltepe, G.; Román, Á.; Buckley, C.R.; Monte Bello, C.C.; Skirycz, A.; Caldana, C.; Haydon, M.J.: A reactive oxygen species Ca2+ signalling pathway identified from a chemical screen for modifiers of sugar-activated circadian gene expression. New Phytologist 236 (3), pp. 1027 - 1041 (2022)
Journal Article
Paschoal, D.; Costa, J. L.; da Silva, E. M.; da Silva, F. B.; Capelin, D.; Ometto, V.; Aricetti, J. A.; Carvalho, G. G.; Pimpinato, R. F.; de Oliveira, R. F. et al.; Carrera, E.; López-Díaz, I.; Rossi, M. L.; Tornisielo, V.; Caldana, C.; Riano-Pachon, D. M.; Cesarino, I.; Teixeira, P. J. P. L.; Figueira, A.: Infection by Moniliophthora perniciosa reprograms Micro-Tom physiology, establishes a sink and increases secondary cell wall synthesis. Journal of Experimental Botany 73 (11), pp. 3651 - 3670 (2022)
Journal Article
Artins, A.; Caldana, C.: The metabolic homeostaTOR: The balance of holding on or letting grow. Current Opinion in Plant Biology 66, 102196 (2022)
Journal Article
Skirycz, A.; Caldana, C.; Fernie, A. R.: Regulation of Plant Primary Metabolism - How Results From Novel Technologies Are Extending Our Understanding From Classical Targeted Approaches. Critical Reviews in Plant Sciences 41 (1), pp. 32 - 51 (2022)
Journal Article
Calderan-Rodrigues, M.J.; Luzarowski, M.; Monte Bello, C.C.; Minen, R.I.; Zühlke, B. M.; Nikoloski, Z.; Skirycz, A.; Caldana, C.: Proteogenic Dipeptides Are Characterized by Diel Fluctuations and Target of Rapamycin Complex-Signaling Dependency in the Model Plant Arabidopsis thaliana. Frontiers in Plant Science 12, 758933 (2021)
Journal Article
Dantas, L.L.B.; Dourado, M.M.; de Lima, N.O.; Cavaçana, N.; Nishiyama, M.; Souza, G.M.; Carneiro, M.S.; Caldana, C.; Hotta, C.T.: Field microenvironments regulate crop diel transcript and metabolite rhythms. New Phytologist 232 (4), pp. 1738 - 1749 (2021)
Journal Article
Viana, A. J. C.; Matiolli, C. C.; Newman, D. W.; Vieira, J. G. P.; Duarte, G. T.; Martins, M. C. M.; Gilbault, E.; Hotta, C. T.; Caldana, C.; Vincentz, M.: The sugar-responsive circadian clock regulator bZIP63 modulates plant growth. New Phytologist 231 (5), pp. 1875 - 1889 (2021)
Journal Article
Busso-Lopes, A. F.; Carnielli, C. M.; Winck, F. V.; de Sa Patroni, F. M.; Oliveira, A. K.; Granato, D. C.; Pereira E Costa, R. A.; Domingues, R. R.; Pauletti, B. A.; Riano-Pachon, D. M. et al.; Aricetti, J.; Caldana, C.; Graner, E.; Della Coletta, R.; Dryden, K.; Fox, J. W.; Paes Leme, A. F.: A Reductionist Approach Using Primary and Metastatic Cell-Derived Extracellular Vesicles Reveals Hub Proteins Associated with Oral Cancer Prognosis. Molecular and Cellular Proteomics 20, 100118 (2021)
Journal Article
da Silva, V. C. H.; Martins, M. C. M.; Calderan-Rodrigues, M.J.; Artins, A.; Monte Bello, C.C.; Gupta, S.; Sobreira, T. J. P.; Riano-Pachon, D. M.; Mafra, V.; Caldana, C.: Shedding Light on the Dynamic Role of the "Target of Rapamycin" Kinase in the Fast-Growing C-4 Species Setaria viridis, a Suitable Model for Biomass Crops. Frontiers in Plant Science 12, 637508 (2021)
Journal Article
Caldana, C.; Martins, M. C. M.; Mubeen, U.; Urrea-Castellanos, R.: The magic 'hammer' of TOR: the multiple faces of a single pathway in the metabolic regulation of plant growth and development. Journal of Experimental Botany 70 (8), pp. 2217 - 2225 (2019)
Journal Article
Mubeen, U.; Giavalisco, P.; Caldana, C.: TOR inhibition interrupts the metabolic homeostasis by shifting the carbon-nitrogen balance in Chlamydomonas reinhardtii. Plant Signaling & Behavior 14 (11), 1670595, p. 1670595 (2019)
Journal Article
Webb, A. A. R.; Seki, M.; Satake, A.; Caldana, C.: Continuous dynamic adjustment of the plant circadian oscillator. Nature Communications 10 (1), 550 (2019)
Journal Article
Jueppner, J.; Mubeen, U.; Leisse, A.; Caldana, C.; Wiszniewski, A.A.G.; Steinhauser, D.; Giavalisco, P.: The target of rapamycin kinase affects biomass accumulation and cell cycle progression by altering carbon/nitrogen balance in synchronized Chlamydomonas reinhardtii cells. The Plant Journal 93 (2), pp. 355 - 376 (2018)

Book Chapter (3)

Book Chapter
Martins, M.C.M.; Mafra, V.; Monte-Bello, C.C.; Caldana, C.: The Contribution of Metabolomics to Systems Biology: Current Applications Bridging Genotype and Phenotype in Plant Science. In: Advances in experimental medicine and biology, Vol. 1346, pp. 91 - 105 (Ed. Winck, F. W.) (2022)
Book Chapter
Winck, F.V.; Dos Santos, A.L.W.; Calderan-Rodrigues, M.J.: Plant Proteomics and Systems Biology. In: Advances in Plant Omics and Systems Biology Approaches, Vol. 1346, pp. 51 - 66 (Ed. Winck, F. W.) (2022)
Book Chapter
Martins, M. C. M.; Caldana, C.; Wolf, L. D.; de Abreu, L. G. F.: The Importance of Experimental Design, Quality Assurance, and Control in Plant Metabolomics Experiments. In: Methods in Molecular Biology, Vol. 1778, pp. 3 - 18 (Ed. António, C.). Humana Press, Clifton, N.J. (2018)

Film (1)

Mubeen, U.; Giraldi, L.A.; Jueppner, J.; Giavalisco, P.: A Multi-Omics Extraction Method for the In-Depth Analysis of Synchronized Cultures of the Green Alga Chlamydomonas reinhardtii. (2019)

Review Article (1)

Review Article
Calderan-Rodrigues, M.J.; de Barros Dante, L.L.; Cheavegatti Gianotto, A.; Caldana, C.: Applying Molecular Phenotyping Tools to Explore Sugarcane Carbon Potential. Frontiers in Plant Science 12, 637166 (2021)
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