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Publications of Arren Bar-Even

Journal Article (47)

  1. 1.
    Journal Article
    Amthor, J. S.; Bar-Even, A.; Hanson, A. D.; Millar, A. H.; Stitt, M.; Sweetlove, L. J.; Tyerman, S. D.: Engineering Strategies to Boost Crop Productivity by Cutting Respiratory Carbon Loss. Plant Cell 31 (2), pp. 297 - 314 (2019)
  2. 2.
    Journal Article
    Ferrari, C.; Proost, S.; Janowski, M.; Becker, J.; Nikoloski, Z.; Bhattacharya, D.; Price, D.; Tohge, T.; Bar-Even, A.; Fernie, A. R. et al.; Stitt, M.; Mutwil, M.: Kingdom-wide comparison reveals the evolution of diurnal gene expression in Archaeplastida. Nature Communications 10, 737 (2019)
  3. 3.
    Journal Article
    Kubis, A.; Bar-Even, A.: Synthetic biology approaches for improving photosynthesis. Journal of Experimental Botany 70 (5), pp. 1425 - 1433 (2019)
  4. 4.
    Journal Article
    Weber, A. P. M.; Bar-Even, A.: Update: Improving the Efficiency of Photosynthetic Carbon Reactions. Plant Physiology 179 (3), pp. 803 - 812 (2019)
  5. 5.
    Journal Article
    Bar-Even, A.: Daring metabolic designs for enhanced plant carbon fixation. Plant Science 273 (SI), pp. 71 - 83 (2018)
  6. 6.
    Journal Article
    Claassens, N. J.; Sánchez-Andrea, I.; Sousa, D.Z.; Bar-Even, A.: Towards sustainable feedstocks: A guide to electron donors for microbial carbon fixation. Current Opinion in Biotechnology 50, pp. 195 - 205 (2018)
  7. 7.
    Journal Article
    Cotton, C. A. R.; Edlich-Muth, C.; Bar-Even, A.: Reinforcing carbon fixation: CO2 reduction replacing and supporting carboxylation. Current Opinion in Biotechnology 49 (Supplement C), pp. 49 - 56 (2018)
  8. 8.
    Journal Article
    Doring, V.; Darii, E.; Yishai, O.; Bar-Even, A.; Bouzon, M.: Implementation of a Reductive Route of One-Carbon Assimilation in Escherichia coli through Directed Evolution. ACS Synthetic Biology 7 (9), pp. 2029 - 2036 (2018)
  9. 9.
    Journal Article
    He, H.; Edlich-Muth, C.; Lindner, S. N.; Bar-Even, A.: Ribulose Monophosphate Shunt Provides Nearly All Biomass and Energy Required for Growth of E. coli. ACS Synthetic Biology 7 (6), pp. 1601 - 1611 (2018)
  10. 10.
    Journal Article
    Jinich, A.; Flamholz, A.; Ren, H.; Kim, S.-J.; Sanchez-Lengeling, B.; Cotton, C. A. R.; Noor, E.; Aspuru-Guzik, A.; Bar-Even, A.: Quantum chemistry reveals thermodynamic principles of redox biochemistry. PLoS Computational Biology 14 (10), e1006471 (2018)
  11. 11.
    Journal Article
    Kruesemann, J. L.; Lindner, S. N.; Dempfle, M.; Widmer, J.; Arrivault, S.; Debacker, M.; He, H.; Kubis, A.; Chayot, R.; Anissimova, M. et al.; Marliere, P.; Cotton, C. A. R.; Bar-Even, A.: Artificial pathway emergence in central metabolism from three recursive phosphoketolase reactions. The FEBS Journal 285 (23), pp. 4367 - 4377 (2018)
  12. 12.
    Journal Article
    Lindner, S. N.; Ramirez, L. C.; Kruesemann, J. L.; Yishai, O.; Belkhelfa, S.; He, H.; Bouzon, M.; Doring, V.; Bar-Even, A.: NADPH-Auxotrophic E-coil: A Sensor Strain for Testing in Vivo Regeneration of NADPH. ACS Synthetic Biology 7 (12), pp. 2742 - 2749 (2018)
  13. 13.
    Journal Article
    Trudeau, D.L.; Edlich-Muth, C.; Zarzycki, J.; Scheffen, M.; Goldsmith, M.; Khersonsky, O.; Avizemer, Z.; Fleishman, S.J.; Cotton, C. A. R.; Erb, T.J. et al.; Tawfik, D.S.; Bar-Even, A.: Design and in vitro realization of carbon-conserving photorespiration. Proceedings of the National Academy of Sciences of the United States of America 115 (49), pp. E11455 - E11464 (2018)
  14. 14.
    Journal Article
    Yishai, O.; Bouzon, M.; Doering, V.; Bar-Even, A.: In Vivo Assimilation of One-Carbon via a Synthetic Reductive Glycine Pathway in Escherichia coli. ACS Synthetic Biology 7 (9), pp. 2023 - 2028 (2018)
  15. 15.
    Journal Article
    Aslan, S.; Noor, E.; Bar-Even, A.: Holistic bioengineering: Rewiring central metabolism for enhanced bioproduction. Biochemical Journal 474 (23), pp. 3935 - 3950 (2017)
  16. 16.
    Journal Article
    Erb, T. J.; Jones, P. R.; Bar-Even, A.: Synthetic metabolism: metabolic engineering meets enzyme design. Current Opinion in Chemical Biology 37, pp. 56 - 62 (2017)
  17. 17.
    Journal Article
    Yishai, O.; Goldbach, L.; Tenenboim, H.; Lindner, S. N.; Bar-Even, A.: Engineered Assimilation of Exogenous and Endogenous Formate in Escherichia coli. ACS Synthetic Biology 6 (9), pp. 1722 - 1731 (2017)
  18. 18.
    Journal Article
    Bar-Even, A.: Formate Assimilation: The Metabolic Architecture of Natural and Synthetic Pathways. Biochemistry 55 (28), pp. 3851 - 3863 (2016)
  19. 19.
    Journal Article
    Zelcbuch, L.; Lindner, S. N.; Zegman, Y.; Slutskin, I. V.; Antonovsky, N.; Gleizer, S.; Milo, R.; Bar-Even, A.: Pyruvate Formate-Lyase Enables Efficient Growth of Escherichia coli on Acetate and Formate. Biochemistry 55 (17), pp. 2423 - 2426 (2016)
  20. 20.
    Journal Article
    Davidia, D.; Noorb, E.; Liebermeisterc, W.; Bar-Even, A.; Flamholze, A.; Tummlerf, K.; Barenholza, U.; Goldenfelda, M.; Shlomig, T.; Miloa, R.: Global characterization of in vivo enzyme catalytic rates and their correspondence to in vitro k cat measurements. Proceedings of the National Academy of Sciences of the United States of America 113 (12), pp. 3401 - 3406 (2016)
  21. 21.
    Journal Article
    Noor, E.; Flamholz, A.; Bar-Even, A.; Davidi, D.; Milo, R.; Liebermeister, W.: The Protein Cost of Metabolic Fluxes: Prediction from Enzymatic Rate Laws and Cost Minimization. PLoS Computational Biology 12 (11), e1005167 (2016)
  22. 22.
    Journal Article
    Yishai, O.; Lindner, S. N.; Gonzalez de la Cruz, J.; Tenenboim, H.; Bar-Even, A.: The formate bio-economy. Current Opinion in Chemical Biology 35, pp. 1 - 9 (2016)
  23. 23.
    Journal Article
    Poust, S.; Piety, J.; Bar-Even, A.; Louw, C.; Baker, D.; Keasling, J. D.; Siegel, J. B.: Mechanistic Analysis of an Engineered Enzyme that Catalyzes the Formose Reaction. Chembiochem 16 (13), pp. 1950 - 1954 (2015)
  24. 24.
    Journal Article
    Siegel, J. B.; Smith, A. L.; Poust, S.; Wargacki, A. J.; Bar-Even, A.; Louw, C.; Shen, B. W.; Eiben, C. B.; Tran, H. M.; Noor, E. et al.; Gallaher, J. L.; Bale, J.; Yoshikuni, Y.; Gelb, M. H.; Keasling, J. D.; Stoddard, B. L.; Lidstrom, M. E.; Baker, D.: Computational protein design enables a novel one-carbon assimilation pathway. Proceedings of the National Academy of Sciences of the United States of America 112 (12), pp. 3704 - 3709 (2015)
  25. 25.
    Journal Article
    Bar-Even, A.; Milo, R.; Noor, E.; Tawfik, D. S.: The Moderately Efficient Enzyme: Futile Encounters and Enzyme Floppiness. Biochemistry 54 (32), pp. 4969 - 4977 (2015)
  26. 26.
    Journal Article
    Zelcbuch, L.; Razo-Mejia, M.; Herz, E.; Yahav, S.; Antonovsky, N.; Kroytoro, H.; Milo, R.; Bar-Even, A.: An In Vivo Metabolic Approach for Deciphering the Product Specificity of Glycerate Kinase Proves that Both E. coli's Glycerate Kinases Generate 2-Phosphoglycerate. PLoS One 10 (3), e0122957 (2015)
  27. 27.
    Journal Article
    Noor, E.; Bar-Even, A.; Flamholz, A.; Reznik, E.; Liebermeister, W.; Milo, R.: Pathway Thermodynamics Highlights Kinetic Obstacles in Central Metabolism. PLoS Computational Biology 10 (2), e1003483 (2014)
  28. 28.
    Journal Article
    Jinich, A.; Rappoport, D.; Dunn, I.; Sanchez-Lengeling, B.; Olivares-Amaya, R.; Noor, E.; Bar-Even, A.; Aspuru-Guzik, A.: Quantum Chemical Approach to Estimating the Thermodynamics of Metabolic Reactions. SCIENTIFIC REPORTS 4, 7022 (2014)
  29. 29.
    Journal Article
    Jinich, A.; Rappoport, D.; Dunn, I.; Sanchez-Lengeling, B.; Olivares-Amaya, R.; Noor, E.; Bar-Even, A.; Aspuru-Guzik, A.: Quantum Chemical Approach to Estimating the Thermodynamics of Metabolic Reactions. Scientific Reports 4, 7022 (2014)
  30. 30.
    Journal Article
    Zelcbuch, L.; Antonovsky, N.; Bar-Even, A.; Levin-Karp, A.; Barenholz, U.; Dayagi, M.; Liebermeister, W.; Flamholz, A.; Noor, E.; Amram, S. et al.; Brandis, A.; Bareia, T.; Yofe, I.; Jubran, H.; Milo, R.: Spanning high-dimensional expression space using ribosome-binding site combinatorics. Nucleic Acids Research 41 (9), e98 (2013)
 
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