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Zeitschriftenartikel (139)

1.
Zeitschriftenartikel
Abasolo, W.; Eder, M.; Yamauchi, K.; Obel, N.; Reinecke, A.; Neumetzler, L.; Dunlop, J. W. C.; Mouille, G.; Pauly, M.; Hofte, H. et al.; Burgert, I.: Pectin May Hinder the Unfolding of Xyloglucan Chains during Cell Deformation: Implications of the Mechanical Performance of Arabidopsis Hypocotyls with Pectin Alterations. Molecular Plant 2 (5), S. 990 - 999 (2009)
2.
Zeitschriftenartikel
Afzal, A. J.; Natarajan, A.; Saini, N.; Iqbal, M. J.; Geisler, M.; El Shemy, H. A.; Mungur, R.; Willmitzer, L.; Lightfoot, D. A.: The Nematode Resistance Allele at the rhg1 Locus Alters the Proteome and Primary Metabolism of Soybean Roots. Plant Physiology 151 (3), S. 1264 - 1280 (2009)
3.
Zeitschriftenartikel
Ahlert, D.; Stegemann, S.; Kahlau, S.; Ruf, S.; Bock, R.: Insensitivity of chloroplast gene expression to DNA methylation. Molecular Genetics and Genomics 282 (1), S. 17 - 24 (2009)
4.
Zeitschriftenartikel
Allwood, J. W.; Erban, A.; de Koning, S.; Dunn, W. B.; Lüdemann, A.; Lommen, A.; Kay, L.; Loscher, R.; Kopka, J.; Goodacre, R.: Inter-laboratory reproducibility of fast gas chromatography-electron impact-time of flight mass spectrometry (GC-EI-TOF/MS) based plant metabolomics. Metabolomics 5 (4), S. 479 - 496 (2009)
5.
Zeitschriftenartikel
Andorf, S.; Gaertner, T.; Steinfath, M.; Witucka-Wall, H.; Altmann, T.; Repsilber, D.: Towards Systems Biology of Heterosis: A Hypothesis about Molecular Network Structure Applied for the Arabidopsis Metabolome. EURASIP Journal on Bioinformatics and Systems Biology, S. 147157 (2009)
6.
Zeitschriftenartikel
Angelovici, R.; Fait, A.; Zhu, X. H.; Szymanski, J.; Feldmesser, E.; Fernie, A. R.; Galili, G.: Deciphering Transcriptional and Metabolic Networks Associated with Lysine Metabolism during Arabidopsis Seed Development. Plant Physiology 151 (4), S. 2058 - 2072 (2009)
7.
Zeitschriftenartikel
Apel, W.; Bock, R.: Enhancement of Carotenoid Biosynthesis in Transplastomic Tomatoes by Induced Lycopene-to-Provitamin A Conversion. Plant Physiology 151 (1), S. 59 - 66 (2009)
8.
Zeitschriftenartikel
Armbruster, U.; Hertle, A.; Makarenko, E.; Zuehlke, J.; Pribil, M.; Dietzmann, A.; Schliebner, I.; Aseeva, E.; Fenino, E.; Scharfenberg, M. et al.; Voigt, C.; Leister, D.: Chloroplast Proteins without Cleavable Transit Peptides: Rare Exceptions or a Major Constituent of the Chloroplast Proteome? Molecular Plant 2 (6), S. 1325 - 1335 (2009)
9.
Zeitschriftenartikel
Armengaud, P.; Sulpice, R.; Miller, A. J.; Stitt, M.; Amtmann, A.; Gibon, Y.: Multilevel Analysis of Primary Metabolism Provides New Insights into the Role of Potassium Nutrition for Glycolysis and Nitrogen Assimilation in Arabidopsis Roots. Plant Physiology 150 (2), S. 772 - 785 (2009)
10.
Zeitschriftenartikel
Armengaud, P.; Zambaux, K.; Hills, A.; Sulpice, R.; Pattison, R. J.; Blatt, M. R.; Amtmann, A.: EZ-Rhizo: integrated software for the fast and accurate measurement of root system architecture. The Plant Journal 57 (5), S. 945 - 956 (2009)
11.
Zeitschriftenartikel
Arrivault, S.; Guenther, M.; Ivakov, A.; Feil, R.; Vosloh, D.; van Dongen, J. T.; Sulpice, R.; Stitt, M.: Use of reverse-phase liquid chromatography, linked to tandem mass spectrometry, to profile the Calvin cycle and other metabolic intermediates in Arabidopsis rosettes at different carbon dioxide concentrations. Plant Journal 59 (5), S. 824 - 839 (2009)
12.
Zeitschriftenartikel
Baessler, O. Y.; Weiss, J.; Wienkoop, S.; Lehmann, K.; Scheler, C.; Dolle, S.; Schwarz, D.; Franken, P.; George, E.; Worm, M. et al.; Weckwerth, W.: Evidence for Novel Tomato Seed Allergens: IgE-Reactive Legumin and Vicilin Proteins Identified by Multidimensional Protein Fractionation-Mass Spectrometry and in Silico Epitope Modeling. Journal of Proteome Research 8 (3), S. 1111 - 1122 (2009)
13.
Zeitschriftenartikel
Barratt, D. H. P.; Derbyshire, P.; Findlay, K.; Pike, M.; Wellner, N.; Lunn, J.; Feil, R.; Simpson, C.; Maule, A. J.; Smith, A. M.: Normal growth of Arabidopsis requires cytosolic invertase but not sucrose synthase. Proceedings of the National Academy of Sciences of the United States of America 106 (31), S. 13124 - 13129 (2009)
14.
Zeitschriftenartikel
Baruah, A.; Simkova, K.; Hincha, D. K.; Apel, K.; Laloi, C.: Modulation of O-1(2)-mediated retrograde signaling by the PLEIOTROPIC RESPONSE LOCUS 1 (PRL1) protein, a central integrator of stress and energy signaling. The Plant Journal 60 (1), S. 22 - 32 (2009)
15.
Zeitschriftenartikel
Bischoff, V.; Cookson, S. J.; Wu, S.; Scheible, W.-R.: Thaxtomin A affects CESA-complex density, expression of cell wall genes, cell wall composition, and causes ectopic lignification in Arabidopsis thaliana seedlings. Journal of Experimental Botany 60 (3), S. 955 - 965 (2009)
16.
Zeitschriftenartikel
Bleidorn, C.; Hill, N.; Erseus, C.; Tiedemann, R.: On the role of character loss in orbiniid phylogeny (Annelida): Molecules vs. morphology. Molecular Phylogenetics and Evolution 52 (1), S. 57 - 69 (2009)
17.
Zeitschriftenartikel
Bleidorn, C.; Podsiadlowski, L.; Zhong, M.; Eeckhaut, I.; Hartmann, S.; Halanych, K. M.; Tiedemann, R.: On the phylogenetic position of Myzostomida: can 77 genes get it wrong? BMC Evolutionary Biology 9, S. 150 (2009)
18.
Zeitschriftenartikel
Börner, T.; Ostersetzer-Biran, O.; Schmitz-Linneweber, C.; Zoschke, R.: Analysis of the regulation of MatK gene expression. Endocytobiosis and cell research: journal of the International Society of Endocytobiology 19, S. 127 - 135 (2009)
19.
Zeitschriftenartikel
Bortesi, L.; Rossato, M.; Schuster, F.; Raven, N.; Stadlmann, J.; Avesani, L.; Falorni, A.; Bazzoni, F.; Bock, R.; Schillberg, S. et al.; Pezzotti, M.: Viral and murine interleukin-10 are correctly processed and retain their biological activity when produced in tobacco. BMC Biotechnology 9, S. 22 (2009)
20.
Zeitschriftenartikel
Brautigam, K.; Dietzel, L.; Kleine, T.; Stroher, E.; Wormuth, D.; Dietz, K. J.; Radke, D.; Wirtz, M.; Hell, R.; Doermann, P. et al.; Nunes-Nesi, A.; Schauer, N.; Fernie, A. R.; Oliver, S. N.; Geigenberger, P.; Leister, D.; Pfannschmidt, T.: Dynamic Plastid Redox Signals Integrate Gene Expression and Metabolism to Induce Distinct Metabolic States in Photosynthetic Acclimation in Arabidopsis. The Plant Cell 21 (9), S. 2715 - 2732 (2009)
21.
Zeitschriftenartikel
Brotman, Y.; Makovitzki, A.; Shai, Y.; Chet, I.; Viterbo, A.: Synthetic Ultrashort Cationic Lipopeptides Induce Systemic Plant Defense Responses against Bacterial and Fungal Pathogens. Applied and Environmental Microbiology 75 (16), S. 5373 - 5379 (2009)
22.
Zeitschriftenartikel
Bulik, S.; Grimbs, S.; Huthmacher, C.; Selbig, J.; Holzhuetter, H. G.: Kinetic hybrid models composed of mechanistic and simplified enzymatic rate laws - a promising method for speeding up the kinetic modelling of complex metabolic networks. FEBS Journal 276 (2), S. 410 - 424 (2009)
23.
Zeitschriftenartikel
Bunik, V. I.; Fernie, A. R.: Metabolic control exerted by the 2-oxoglutarate dehydrogenase reaction: a cross-kingdom comparison of the crossroad between energy production and nitrogen assimilation. Biochemical Journal 422 (3), S. 405 - 421 (2009)
24.
Zeitschriftenartikel
Cheng, F. X.; Hartmann, S.; Gupta, M.; Ibrahim, J. G.; Vision, T. J.: A hierarchical model for incomplete alignments in phylogenetic inference. Bioinformatics 25 (5), S. 592 - 598 (2009)
25.
Zeitschriftenartikel
Childs, L.; Nikoloski, Z.; May, P.; Walther, D.: Identification and classification of ncRNA molecules using graph properties. Nucleic Acids Research 37 (9), S. e66 (2009)
26.
Zeitschriftenartikel
Christian, N.; May, P.; Kempa, S.; Handorf, T.; Ebenhoeh, O.: An integrative approach towards completing genome-scale metabolic networks. Molecular Biosystems 5 (12), S. 1889 - 1903 (2009)
27.
Zeitschriftenartikel
Cuadros-Inostroza, A.; Caldana, C.; Redestig, H.; Kusano, M.; Lisec, J.; Pena-Cortes, H.; Willmitzer, L.; Hannah, M. A.: TargetSearch - a Bioconductor package for the efficient preprocessing of GC-MS metabolite profiling data. BMC Bioinformatics 10, S. 428 (2009)
28.
Zeitschriftenartikel
DeBolt, S.; Scheible, W.-R.; Schrick, K.; Auer, M.; Beisson, F.; Bischoff, V.; Bouvier-Nave, P.; Carroll, A.; Hematy, K.; Li, Y. H. et al.; Milne, J.; Nair, M.; Schaller, H.; Zemla, M.; Somerville, C.: Mutations in UDP-Glucose:Sterol Glucosyltransferase in Arabidopsis Cause Transparent Testa Phenotype and Suberization Defect in Seeds. Plant Physiology 151 (1), S. 78 - 87 (2009)
29.
Zeitschriftenartikel
Degenkolbe, T.; Do, P. T.; Zuther, E.; Repsilber, D.; Walther, D.; Hincha, D. K.; Koehl, K. I.: Expression profiling of rice cultivars differing in their tolerance to long-term drought stress. Plant Molecular Biology 69 (1-2), S. 133 - 153 (2009)
30.
Zeitschriftenartikel
Depuydt, S.; Trenkamp, S.; Fernie, A. R.; Elftieh, S.; Renou, J. P.; Vuylsteke, M.; Holsters, M.; Vereecke, D.: An Integrated Genomics Approach to Define Niche Establishment by Rhodococcus fascians. Plant Physiology 149 (3), S. 1366 - 1386 (2009)
31.
Zeitschriftenartikel
Dita, M. A.; Die, J. V.; Roman, B.; Krajinski, F.; Kuester, H.; Moreno, M. T.; Cubero, J. I.; Rubiales, D.: Gene expression profiling of Medicago truncatula roots in response to the parasitic plant Orobanche crenata. Weed Research 49, S. 66 - 80 (2009)
32.
Zeitschriftenartikel
Durek, P.; Schudoma, C.; Weckwerth, W.; Selbig, J.; Walther, D.: Detection and characterization of 3D-signature phosphorylation site motifs and their contribution towards improved phosphorylation site prediction in proteins. BMC Bioinformatics 10, S. 117 (2009)
33.
Zeitschriftenartikel
Fernie, A. R.; Martinoia, E.: Malate. Jack of all trades or master of a few? Phytochemistry 70 (7), S. 828 - 832 (2009)
34.
Zeitschriftenartikel
Fernie, A. R.; Schauer, N.: Metabolomics-assisted breeding: a viable option for crop improvement? Trends in Genetics 25 (1), S. 39 - 48 (2009)
35.
Zeitschriftenartikel
Forde, B. G.; Walch-Liu, P.: Nitrate and glutamate as environmental cues for behavioural responses in plant roots. Plant Cell and Environment 32 (6), S. 682 - 693 (2009)
36.
Zeitschriftenartikel
Fuehrs, H.; Goetze, S.; Specht, A.; Erban, A.; Gallien, S.; Heintz, D.; van Dorsselaer, A.; Kopka, J.; Braun, H. P.; Horst, W. J.: Characterization of leaf apoplastic peroxidases and metabolites in Vigna unguiculata in response to toxic manganese supply and silicon. Journal of Experimental Botany 60 (6), S. 1663 - 1678 (2009)
37.
Zeitschriftenartikel
Gaertner, T.; Steinfath, M.; Andorf, S.; Lisec, J.; Meyer, R. C.; Altmann, T.; Willmitzer, L.; Selbig, J.: Improved Heterosis Prediction by Combining Information on DNA- and Metabolic Markers. PLoS One 4 (4), S. e5220 (2009)
38.
Zeitschriftenartikel
Gajdanowicz, P.; Garcia-Mata, C.; Gonzalez, W.; Morales-Navarro, S. E.; Sharma, T.; Gonzalez-Nilo, F. D.; Gutowicz, J.; Mueller-Roeber, B.; Blatt, M. R.; Dreyer, I.: Distinct roles of the last transmembrane domain in controlling Arabidopsis K+ channel activity. New Phytologist 182 (2), S. 380 - 391 (2009)
39.
Zeitschriftenartikel
Garcia, V.; Stevens, R.; Gil, L.; Gilbert, L.; Gest, N.; Petit, J.; Faurobert, M.; Maucourt, M.; Deborde, C.; Moing, A. et al.; Poessel, J. L.; Jacob, D.; Bouchet, J. P.; Giraudel, J. L.; Gouble, B.; Page, D.; Alhagdow, M.; Massot, C.; Gautier, H.; Lemaire-Chamley, M.; de Daruvar, A.; Rolin, D.; Usadel, B.; Lahaye, M.; Causse, M.; Baldet, P.; Rothan, C.: An integrative genomics approach for deciphering the complex interactions between ascorbate metabolism and fruit growth and composition in tomato. Comptes Rendus Biologies 332 (11), S. 1007 - 1021 (2009)
40.
Zeitschriftenartikel
Giavalisco, P.; Koehl, K. I.; Hummel, J.; Seiwert, B.; Willmitzer, L.: 13C isotope-labeled metabolomes allowing for improved compound annotation and relative quantification in liquid chromatography-mass spectrometry-based metabolomic research. Analytical Chemistry 81 (15), S. 6546 - 6551 (2009)
41.
Zeitschriftenartikel
Gibon, Y.; Pyl, E. T.; Sulpice, R.; Lunn, J. E.; Hoehne, M.; Guenther, M.; Stitt, M.: Adjustment of growth, starch turnover, protein content and central metabolism to a decrease of the carbon supply when Arabidopsis is grown in very short photoperiods. Plant Cell and Environment 32 (7), S. 859 - 874 (2009)
42.
Zeitschriftenartikel
Gilbert, L.; Alhagdow, M.; Nunes-Nesi, A.; Quemener, B.; Guillon, F.; Bouchet, B.; Faurobert, M.; Gouble, B.; Page, D.; Garcia, V. et al.; Petit, J.; Stevens, R.; Causse, M.; Fernie, A. R.; Lahaye, M.; Rothan, C.; Baldet, P.: GDP-d-mannose 3,5-epimerase (GME) plays a key role at the intersection of ascorbate and non-cellulosic cell-wall biosynthesis in tomato. The Plant Journal 60 (3), S. 499 - 508 (2009)
43.
Zeitschriftenartikel
Gille, S.; Hansel, U.; Ziemann, M.; Pauly, M.: Identification of plant cell wall mutants by means of a forward chemical genetic approach using hydrolases. Proceedings of the National Academy of Sciences of the United States of America 106 (34), S. 14699 - 14704 (2009)
44.
Zeitschriftenartikel
Gruber, V.; Blanchet, S.; Diet, A.; Zahaf, O.; Boualem, A.; Kakar, K.; Alunni, B.; Udvardi, M. K.; Frugier, F.; Crespi, M.: Identification of transcription factors involved in root apex responses to salt stress in Medicago truncatula. Molecular Genetics and Genomics 281 (1), S. 55 - 66 (2009)
45.
Zeitschriftenartikel
Guenther, S.; von Eichborn, J.; May, P.; Preissner, R.: JAIL: a structure-based interface library for macromolecules. Nucleic Acids Research 37 (Database issue), S. 338 - 341 (2009)
46.
Zeitschriftenartikel
Guether, M.; Balestrini, R.; Hannah, M. A.; He, J.; Udvardi, M. K.; Bonfante, P.: Genome-wide reprogramming of regulatory networks, transport, cell wall and membrane biogenesis during arbuscular mycorrhizal symbiosis in Lotus japonicus. New Phytologist 182 (1), S. 200 - 212 (2009)
47.
Zeitschriftenartikel
Gupta, K. J.; Zabalza, A.; van Dongen, J. T.: Regulation of respiration when the oxygen availability changes. Physiologia Plantarum 137 (4), S. 383 - 391 (2009)
48.
Zeitschriftenartikel
Gutjahr, C.; Novero, M.; Guether, M.; Montanari, O.; Udvardi, M. K.; Bonfante, P.: Presymbiotic factors released by the arbuscular mycorrhizal fungus Gigaspora margarita induce starch accumulation in Lotus japonicus roots. New Phytologist 183 (1), S. 53 - 61 (2009)
49.
Zeitschriftenartikel
Hannemann, J.; Poorter, H.; Usadel, B.; Blaesing, O. E.; Finck, A.; Tardieu, F.; Atkin, O. K.; Pons, T.; Stitt, M.; Gibon, Y.: Xeml Lab: a tool that supports the design of experiments at a graphical interface and generates computer-readable metadata files, which capture information about genotypes, growth conditions, environmental perturbations and sampling strategy. Plant Cell and Environment 32 (9), S. 1185 - 1200 (2009)
50.
Zeitschriftenartikel
Heide, H.; Nordhues, A.; Drepper, F.; Nick, S.; Schulz-Raffelt, M.; Haehnel, W.; Schroda, M.: Application of quantitative immunoprecipitation combined with knockdown and cross-linking to Chlamydomonas reveals the presence of vesicle-inducing protein in plastids 1 in a common complex with chloroplast HSP90C. Proteomics 9 (11), S. 3079 - 3089 (2009)
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