Zeitschriftenartikel (215)

51.
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Bouzon, M.; Döring, V.; Dubois, I.; Berger, A.; Stoffel, G.M.M.; Ramirez, L. C.; Meyer, S.N.; Fouré, M.; Roche, D.; Perret, A. et al.; Erb, T.J.; Bar-Even, A.; Lindner, S. N.: Change in cofactor specificity of oxidoreductases by adaptive evolution of an escherichia coli nadph-auxotrophic strain. mBio 12 (4), e00329-21 (2021)
52.
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Giraldo, N.D.; Correa, S. M.; Arbeláez, A.; Figueroa, F.L.; Ríos-Estepa, R.; Atehortúa, L.: Metabolic response of Botryococcus braunii to high bicarbonate dosages and other conditions: analysis of photosynthetic performance, productivity, and lipidomic profile. Journal of Applied Phycology 33, S. 2875 - 2896 (2021)
53.
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Xu, R.; Razaghi-Moghadam, Z.; Nikoloski, Z.: Maximization of non-idle enzymes improves the coverage of the estimated maximal in vivo enzyme catalytic rates in Escherichia coli. Bioinformatics 37 (21), S. 3848 - 3855 (2021)
54.
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Fernie, A. R.: Radiation and subsequent diversification underpin the natural diversity of phenylpropanoids across the green lineage. The Plant Journal 107 (4), S. 973 - 974 (2021)
55.
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Peixoto, B.; Moraes, T. A.; Mengin, V.; Margalha, L.; Vicente, R.; Feil, R.; Höhne, M.; Sousa, A. G. G.; Lilue, J.; Stitt, M. et al.; Lunn, J. E.; Baena-González, E.: Impact of the SnRK1 protein kinase on sucrose homeostasis and the transcriptome during the diel cycle. Plant Physiology 187 (3), S. 1357 - 1373 (2021)
56.
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Dantas, L.L.B.; Dourado, M.M.; de Lima, N.O.; Cavaçana, N.; Nishiyama, M.; Souza, G.M.; Carneiro, M.S.; Caldana, C.; Hotta, C.T.: Field microenvironments regulate crop diel transcript and metabolite rhythms. New Phytologist 232 (4), S. 1738 - 1749 (2021)
57.
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Zhu, F.; Fernie, A. R.: Plants upcycle gene functions to suit their roots. Trends in Plant Science 26 (10), S. 996 - 998 (2021)
58.
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Alseekh, S.; Aharoni, A.; Brotman, Y.; Contrepois, K.; D’Auria, J.; Ewald, J.; C. Ewald, J.; Fraser, P. D.; Giavalisco, P.; Hall, R. D. et al.; Heinemann, M.; Link, H.; Luo, J.; Neumann, S.; Nielsen, J.; de Souza, L. P.; Saito, K.; Sauer, U.; Schroeder, F. C.; Schuster, S.; Siuzdak, G.; Skirycz, A.; Sumner, L. W.; Snyder, M. P.; Tang, H.; Tohge, T.; Wang, Y.; Wen, W.; Wu, S.; Xu, G.; Zamboni, N.; Fernie, A. R.: Mass spectrometry-based metabolomics: a guide for annotation, quantification and best reporting practices. Nature Methods 18 (7), S. 747 - 756 (2021)
59.
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Duarte, G. T.; Pandey, P. K.; Vaid, N.; Alseekh, S.; Fernie, A. R.; Nikoloski, Z.; Laitinen, R.: Plasticity of rosette size in response to nitrogen availability is controlled by an RCC1-family protein. Plant, Cell and Environment 44 (10), S. 3398 - 3411 (2021)
60.
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Guadalupe Dominguez, P.; Conti, G.; Duffy, T.; Insani, M.; Alseekh, S.; Asurmendi, S.; Fernie, A. R.; Carrari, F.: Multi-omics analyses reveal the roles of the ASR1 transcription factor in tomato fruits. Journal of Experimental Botany 72 (28), S. 6409 - 6509 (2021)
61.
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Sedaghatmehr, M.; Thirumalaikumar, V. P.; Kamranfar, I.; Schulz, K.; Mueller-Roeber, B.; Sampathkumar, A.; Balazadeh, S.: Autophagy complements metalloprotease FtsH6 in degrading plastid heat shock protein HSP21 during heat stress recovery. Journal of Experimental Botany (2021)
62.
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He, W.; Baysal, C.; Lobato Gómez, M.; Huang, X.; Alvarez, D.; Zhu, C.; Armario-Najera, V.; Blanco Perera, A.; Cerda Bennaser, P.; Saba-Mayoral, A. et al.; Sobrino-Mengual, G.; Vargheese, A.; Abranches, R.; Abreu, I. A.; Balamurugan, S.; Bock, R.; Buyel, J. F.; Cunha, N. B. d.; Daniell, H.; Faller, R.; Folgado, A.; Gowtham, I.; Häkkinen, S. T.; Shashi, K.; Ramalingam, S. K.; Lacorte, C.; Lomonossoff, G. P.; Luís, I. M.; K.-C. Ma, J.; McDonald, K. A.; Murad, A.; Nandi, S.; O’Keef, B.; Parthiban, S.; Paul, M. J.; Ponndorf, D.; Rech, E.; Rodrigues, J. C.M.; Ruf, S.; Schillberg, S.; Schwestka, J.; Shah, P. S.; Singh, R.; Stoger, E.; Twyman, R. M.; Varghese, I. P.; Vianna, G. R.; Webster, G.; Wilbers, R. H.P.; Christou, P.; Oksman-Caldentey, K.-M.; Capell, T.: Contributions of the international plant science community to the fight against infectious diseases in humans – part 2: affordable drugs in edible plants for endemic and re-emerging diseases. Plant Biotechnology Journal 19 (10), S. 1921 - 1936 (2021)
63.
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Lobato Gómez, M.; Huang, X.; Alvarez, D.; He, W.; Baysal, C.; Zhu, C.; Armario-Najera, V.; Blanco Perera, A.; Cerda Bennasser, P.; Saba-Mayoral, A. et al.; Sobrino-Mengual, G.; Vargheese, A.; Abranches, R.; Abreu, I. A.; Balamurugan, S.; Bock, R.; Buyel, J.F.; da Cunha; B, N.; Daniell, H.; Faller, R.; Folgado, A.; Gowtham, I.; Häkkinen, S.; Shashi, K.; Kumar Ramalingam, S.; Lacorte, C.; Lomonossoff, G. P.; Luís, I. M.; Ma, J. K.-C.; McDonald, K. A.; Murad, A.; Nandi, S.; O’Keef, B.; Oksman-Caldentey, K.-M.; Parthiban, S.; Paul, M.; Ponndorf, D.; Rech, E.; Rodrigues, J. C.M.; Ruf, S.; Schillberg, S.; Schwestka, J.; Shah, P. S.; Singh, R.; Stoger, E.; Twyman, R. M.; Varghese, I. P.; Vianna, G. R.; Webster, G.; Wilbers, R. H.P.; Capell, T.; Christou, P.: Contributions of the international plant science community to the fight against human infectious diseases – part 1: epidemic and pandemic diseases. Plant Biotechnology Journal 19 (10), S. 1901 - 1920 (2021)
64.
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Moreno, J.C.; Rojas, B.E.; Vicente, R.; Gorka, M.; Matz, T.; Kosmacz, M.; Peralta-Ariza, J.S.; Zhang, Y.; Alseekh, S.; Childs, D. et al.; Luzarowski, M.; Nikoloski, Z.; Zarivach, R.; Walther, D.; Hartman, M.D.; Figueroa, C.M.; Iglesias, A.A.; Fernie, A. R.; Skirycz, A.: Tyr-Asp inhibition of glyceraldehyde 3-phosphate dehydrogenase affects plant redox metabolism. EMBO Journal, e106800 (2021)
65.
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Ashraf, M.; Mao, Q.; Hong, J.; Shi, L.; Ran, X.; Liaquat, F.; Uzair, M.; Liang, W.; Fernie, A. R.; Shi, J.: HSP70-16 and VDAC3 jointly inhibit seed germination under cold stress in Arabidopsis. Plant, Cell and Environment 44 (11), S. 3616 - 3627 (2021)
66.
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Altman, A.; Fan, L.; Foyer, C.; Cowling, W.; Mittler, R.; Qaim, M.; Weber, A.; Reynolds, M.; Varshney, R.; Fernie, A. R.: Past and Future Milestones of Plant Breeding. Trends in Plant Science 26 (6), S. 530 - 538 (2021)
67.
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Razaghi-Moghadam, Z.; Nikoloski, Z.: GeneReg: a constraint-based approach for design of feasible metabolic engineering strategies at the gene level. Bioinformatics 37 (12), S. 1717 - 1723 (2021)
68.
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Eng, R.C.; Schneider, R.; Matz, T.; Carter, R.; Ehrhardt, D. W.; Jönsson, H.; Nikoloski, Z.; Sampathkumar, A.: KATANIN and CLASP function at different spatial scales to mediate microtubule response to mechanical stress in Arabidopsis cotyledons. Current Biology 31 (15), S. 3262 - 3274 (2021)
69.
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Zupok, A.; Kozul, D.; Schöttler, M. A.; Niehörster, J.; Garbsch, F.; Liere, K.; Fischer, A.; Zoschke, R.; Malinova, I.; Bock, R. et al.; Greiner, S.: A photosynthesis operon in the chloroplast genome drives speciation in evening primroses. The Plant Cell 33 (8), S. 2583 - 2601 (2021)
70.
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Ancín, M.; Larraya, L.; Florez-Sarasa, I. D.; Bénard, C.; Fernández-San Millán, A.; Veramendi, J.; Gibon, Y.; Fernie, A. R.; Aranjuelo, I.; Farran, I.: Thioredoxin m overexpression in chloroplasts alters carbon and nitrogen partitioning in tobacco plants. Journal of Experimental Botany (2021)
71.
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Ann DeTar, R.; Barahimipour, R.; Manavski, N.; Schwenkert, S.; Höhner, R.; Bölter, B.; Inaba, T.; Meurer, J.; Zoschke, R.; Kunz, H.-H.: Loss of inner-envelope K+/H+ exchangers impairs plastid rRNA maturation and gene expression. The Plant Cell 33 (7), S. 2479 - 2505 (2021)
72.
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Zimmermann, S. E.; Benstein, R. M.; Flores-Tornero, M.; Blau, S.; Anoman, A. D.; Rosa-Téllez, S.; Gerlich, S. C.; Salem, M.A.; Alseekh, S.; Kopriva, S. et al.; Wewer, V.; Flügge, U.-I.; Jacoby, R. P.; Fernie, A. R.; Giavalisco, P.; Ros, R.; Krueger, S.: The phosphorylated pathway of serine biosynthesis links plant growth with nitrogen metabolism. Plant Physiology 186 (3), S. 1487 - 1506 (2021)
73.
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de Souza, L. P.; Alseekh, S.; Scossa, F.; Fernie, A. R.: Ultra-high-performance liquid chromatography high-resolution mass spectrometry variants for metabolomics research. Nature Methods 18, S. 733 - 746 (2021)
74.
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Wang, Z.; Butel, N.; Santos-González, J.; Simon, L.; Wärdig, C.; Köhler, C.: Transgenerational effect of mutants in the RNA-directed DNA methylation pathway on the triploid block in Arabidopsis. Genome Biology 22 (1), 141 (2021)
75.
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Borghi, M.; Fernie, A. R.: From flowers to seeds: how the metabolism of flowers frames plant reproduction. The biochemist: the bulletin of the Biochemical Society 43 (3), S. 14 - 18 (2021)
76.
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Dobrica, M.-O.; van Eerde, A.; Tucureanu, C.; Onu, A.; Paruch, L.; Caras, I.; Vlase, E.; Steen, H.; Haugslien, S.; Alonzi, D. et al.; Zitzmann, N.; Bock, R.; Dubuisson, J.; Popescu, C.-I.; Stavaru, C.; Liu Clarke, J.; Branza-Nichita, N.: Hepatitis C virus E2 envelope glycoprotein produced in Nicotiana benthamiana triggers humoral response with virus-neutralizing activity in vaccinated mice. Plant Biotechnology Journal (2021)
77.
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Ishihara, H.; Moraes, T. A.; Arrivault, S.; Stitt, M.: Assessing Protein Synthesis and Degradation Rates in Arabidopsis thaliana Using Amino Acid Analysis. Current Protocols 1 (5), e114 (2021)
78.
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Viana, A. J. C.; Matiolli, C. C.; Newman, D. W.; Vieira, J. G. P.; Duarte, G. T.; Martins, M. C. M.; Gilbault, E.; Hotta, C. T.; Caldana, C.; Vincentz, M.: The sugar-responsive circadian clock regulator bZIP63 modulates plant growth. New Phytologist 231 (5), S. 1875 - 1889 (2021)
79.
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Yadav, V. K.; Santos-González, J.; Köhler, C.: INT-Hi-C reveals distinct chromatin architecture in endosperm and leaf tissues of Arabidopsis. Nucleic Acids Research 49 (8), S. 4371 - 4385 (2021)
80.
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Fernie, A. R.: Associating primary and specialized metabolism with salt induced osmotic stress tolerance in maize. New Phytologist 230 (6), S. 2991 - 2093 (2021)
81.
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Hinge, V.; Chavhan, R.; Kale, S.; Suprasanna, P.; Kadam, U. S.: Engineering Resistance Against Viruses in Field Crops Using CRISPR-Cas9. Current Genomics 22 (3), S. 214 - 231 (2021)
82.
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Zhang, Y.; Giese, J.; Kerbler, S.M.-L.; Siemiatkowska, B.; de Souza, L. P.; Alpers, J.; Medeiros, D.B.; Hincha, D. K.; Daloso, D. M.; Stitt, M. et al.; Finkemeier, I.; Fernie, A. R.: Two mitochondrial phosphatases, PP2c63 and Sal2, are required for posttranslational regulation of the TCA cycle in Arabidopsis. Molecular Plant 14 (7), S. 1104 - 1118 (2021)
83.
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Baptistella, J. L. C.; Llerena, J. P. P.; Domingues-Júnior, A. P.; Fernie, A. R.; Favarin, J. L.; Mazzafera, P.: Differential responses of three Urochloa species to low phosphorus availability. Annals of Applied Biology 179 (2), S. 216 - 230 (2021)
84.
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Wu, G.; Bock, R.: GUN control in retrograde signaling: How GENOMES UNCOUPLED proteins adjust nuclear gene expression to plastid biogenesis. The Plant Cell 33 (3), S. 457 - 574 (2021)
85.
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Scossa, F.; Fernie, A. R.: When a Crop Goes Back to the Wild: Feralization. Trends in Plant Science 26 (6), S. 543 - 545 (2021)
86.
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Malinova, I.; Zupok, A.; Massouh, A.; Schöttler, M. A.; Meyer, E. H.; Yaneva-Roder, L.; Szymanski, W. G.; Rößner, M.; Ruf, S.; Bock, R. et al.; Greiner, S.: Correction of Frameshift Mutations in the atpB Gene by Translational Recoding in Chloroplasts of Oenothera and Tobacco. The Plant Cell 33 (5), S. 1682 - 1705 (2021)
87.
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Fichtner, F.; Lunn, J. E.: The Role of Trehalose 6-Phosphate (Tre6P) in Plant Metabolism and Development. Annual Review of Plant Biology 72, S. 737 - 760 (2021)
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Condori-Apfata, J.; Batista-Silva, W.; Medeiros, D.B.; Vargas, J.; Valente, L.; Perez-Diaz, J.; Fernie, A. R.; Araujo, W.; Nunes-Nesi, A.: Downregulation of the E-2 Subunit of 2-Oxoglutarate Dehydrogenase Modulates Plant Growth by Impacting Carbon-Nitrogen Metabolism in Arabidopsis thaliana. Plant and Cell Physiology 62 (5), S. 798 - 814 (2021)
89.
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da Fonseca-Pereira, P.; Souza, P. V. L.; Fernie, A. R.; Timm, S.; Daloso, D. M.; Araújo, W. L.: Thioredoxin-mediated regulation of (photo)respiration and central metabolism. Journal of Experimental Botany 72 (17), S. 5987 - 6002 (2021)
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Somssich, M.; Vandenbussche, F.; Ivakov, A.; Funke, N.; Ruprecht, C.; Vissenberg, K.; VanDer Straeten, D.; Persson, S.; Suslov, D.: Brassinosteroids Influence Arabidopsis Hypocotyl Graviresponses through Changes in Mannans and Cellulose. Plant and Cell Physiology 62 (4), S. 678 - 692 (2021)
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Nowak, J.; Eng, R.C.; Matz, T.; Waack, M.; Persson, S.; Sampathkumar, A.; Nikoloski, Z.: A network-based framework for shape analysis enables accurate characterization of leaf epidermal cells. Nature Communications 12 (1), 458 (2021)
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Schulz, P.; Piepenburg, K.; Lintermann, R.; Herde, M.; Schöttler, M. A.; Schmidt, L. K.; Ruf, S.; Kudla, J.; Romeis, T.; Bock, R.: Improving plant drought tolerance and growth under water limitation through combinatorial engineering of signaling networks. Plant Biotechnology Journal 19 (1), S. 74 - 86 (2021)
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Hertle, A. P.; Haberl, B.; Bock, R.: Horizontal genome transfer by cell-to-cell travel of whole organelles. Science Advances 7 (1), eabd8215 (2021)
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Agudo-Canalejo, J.; Schultz, S. W.; Chino, H.; Migliano, S. M.; Saito, C.; Koyama-Honda, I.; Stenmark, H.; Brech, A.; May, A. I.; Mizushima, N. et al.; Knorr, R. L.: Wetting regulates autophagy of phase-separated compartments and the cytosol. Nature 591, S. 142 - 146 (2021)
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Alseekh, S.; Kostova, D.; Bulut, M.; Fernie, A. R.: Genome-wide association studies: assessing trait characteristics in model and crop plants. Cellular and Molecular Life Sciences 78 (15), S. 5743 - 5754 (2021)
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Ancín, M.; Larraya, L.; Florez-Sarasa, I. D.; Bénard, C.; Fernández-San Millán, A.; Veramendi, J.; Gibon, Y.; Fernie, A. R.; Aranjuelo, I.; Farran, I.: Overexpression of thioredoxin m in chloroplasts alters carbon and nitrogen partitioning in tobacco. Journal of Experimental Botany 72 (13), S. 4949 - 4964 (2021)
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Aneklaphakij, C.; Saigo, T.; Watanabe, M.; Naake, T.; Fernie, A. R.; Bunsupa, S.; Satitpatipan, V.; Tohge, T.: Diversity of Chemical Structures and Biosynthesis of Polyphenols in Nut-Bearing Species. Frontiers in Plant Science 12, 642581 (2021)
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Avidan, O.; Malitsky, S.; Pick, U.: Fatty Acid Production and Direct Acyl Transfer through Polar Lipids Control TAG Biosynthesis during Nitrogen Deprivation in the Halotolerant Alga Dunaliella tertiolecta. Marine Drugs 19 (7), 368 (2021)
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Bachmann, J. A.; Tedder, A.; Fracassetti, M.; Steige, K. A.; Lafon-Placette, C.; Köhler, C.; Slotte, T.: On the origin of the widespread self-compatible allotetraploid Capsella bursa-pastoris (Brassicaceae). Heredity 127 (1), S. 124 - 134 (2021)
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Back, G.; Walther, D.: Identification of cis-regulatory motifs in first introns and the prediction of intron-mediated enhancement of gene expression in Arabidopsis thaliana. BMC Genomics 22 (1), 390 (2021)
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