Publikationen von B. Usadel

Strickert, M., Sreenivasulu, N., Usadel, B. & Seiffert, U. Correlation-maximizing surrogate gene space for visual mining of gene expression patterns in developing barley endosperm tissue. BMC Bioinformatics 8, 165 (2007).

Studart-Guimaraes, C., Fait, A., Nunes-Nesi, A., Carrari, F., Usadel, B. & Fernie, A. R. Reduced Expression of Succinyl CoA Ligase can be Compensated for by an Upregulation of the {gamma}-amino-butyrate (GABA) Shunt in Illuminated Tomato Leaves. Plant Physiology 145, 626–639 (2007).

Sulpice, R., Tschoep, H., von Korff, M., Buessis, D., Usadel, B., Hoehne, M., Witucka-Wall, H., Altmann, T., Stitt, M. & Gibon, Y. Description and applications of a rapid and sensitive non-radioactive microplate-based assay for maximum and initial activity of D-ribulose-1,5-bisphosphate carboxylase/oxygenase. Plant Cell and Environment 30, 1163–1175 (2007).

Tellstroem, V., Usadel, B., Thimm, O., Stitt, M., Kuester, H. & Niehaus, K. The lipopolysaccharide of Sinorhizobium meliloti suppresses defense-associated gene expression in cell cultures of the host plant Medicago truncatula. Plant Physiology 143, 825–837 (2007).

Gibon, Y., Usadel, B., Blaesing, O. E., Kamlage, B., Hoehne, M., Trethewey, R. & Stitt, M. Integration of metabolite with transcript and enzyme activity profiling during diurnal cycles in Arabidopsis rosettes. Genome Biology 7, R76 (2006).

Urbanczyk-Wochniak, E., Usadel, B., Thimm, O., Nunes-Nesi, A., Carrari, F., Davy, M., Blaesing, O., Kowalczyk, M., Weicht, D., Polinceusz, A., Meyer, S., Stitt, M. & Fernie, A. R. Conversion of MapMan to allow the analysis of transcript data from Solanaceous species: Effects of genetic and environmental alterations in energy metabolism in the leaf. Plant Molecular Biology 60, 773–792 (2006).

Blaesing, O. E., Gibon, Y., Guenther, M., Hoehne, M., Morcuende, R., Osuna, D., Thimm, O., Usadel, B., Scheible, W.-R. & Stitt, M. Sugars and circadian regulation make major contributions to the global regulation of diurnal gene expression in Arabidopsis. Plant Cell 17, 3257–3281 (2005).

Kanter, U., Usadel, B., Guerineau, F., Li, Y., Pauly, M. & Tenhaken, R. The inositol oxygenase gene family of Arabidopsis is involved in the biosynthesis of nucleotide sugar precursors for cell-wall matrix polysaccharides. Planta 221, 243–254 (2005).

Kopka, J., Schauer, N., Krueger, S., Birkemeyer, C., Usadel, B., Bergmueller, E., Doermann, P., Weckwerth, W., Gibon, Y., Stitt, M., Willmitzer, L., Fernie, A. R. & Steinhauser, D. GMD@CSB.DB: the Golm Metabolome Database. Bioinformatics 21, 1635–1638 (2005).

Usadel, B., Kuschinsky, A. M., Steinhauser, D. & Pauly, M. Transcriptional co-response analysis as a tool to identify new components of the wall biosynthetic machinery. Plant Biosystems 139, 69–73 (2005).

Steinhauser, D., Usadel, B., Luedemann, A., Thimm, O. & Kopka, J. CSB.DB: a comprehensive systems-biology database. Bioinformatics 20, 3647–3651 (2004).

Usadel, B., Kuschinsky, A. M., Rosso, M. G., Eckermann, N. & Pauly, M. RHM2 is involved in mucilage pectin synthesis and is required for the development of the seed coat in Arabidopsis. Plant Physiology 134, 286–295 (2004).

Usadel, B., Schluter, U., Molhoj, M., Gipmans, M., Verma, R., Kossmann, J., Reiter, W. D. & Pauly, M. Identification and characterization of a UDP-D-glucuronate 4-epimerase in Arabidopsis. FEBS Letters 569, 327–331 (2004).

Lerouxel, O., Choo, T. S., Seveno, M., Usadel, B., Faye, L., Lerouge, P. & Pauly, M. Rapid structural phenotyping of plant cell wall mutants by enzymatic oligosaccharide fingerprinting. Plant Physiology 130, 1754–1763 (2002).

Steinhauser, D., Krall, L., Müssig, C., Büssis, D. & Usadel, B. in Analysis of Biological Networks (Hrsg. Junker, B. H., Schreiber, F. & Zomaya, A. Y.) (Wiley, 2008). doi:10.1002/9780470253489.ch13

Steinhauser, D. & Usadel, B. in Plant Genomics and Bioinformatics Expression Micro Arrays and Beyond - a course book (Hrsg. Freitag, J.) 190–192 (MPI-MP, 2006). auf <http://hdl.handle.net/11858/00-001M-0000-0014-29BE-C>

Thimm, O., Blaesing, O., Usadel, B. & Gibon, Y. in Advances in Plant Research - Control of Primary Metabolism in Plants (Hrsg. Plaxton, W. & MacManus, M.) (Blackwell Publ., 2005). auf <http://hdl.handle.net/11858/00-001M-0000-0014-2B0D-8>

Poorter, H., Fiorani, F., Stitt, M., Schurr, U., Finck, A., Gibon, Y., Usadel, B., Munns, R., Atkin, O. K., Tardieu, F. & Pons, T. L. The art of growing plants for experimental purposes: a practical guide for the plant biologist Review. Functional Plant Biology 39, 821–838 (2012).

Muessig, C., Schroeder, F., Usadel, B. & Lisso, J. Structure and putative function of NFX1-like proteins in plants. Plant Biology 12, 381–394 (2010).

Schulze, W. X. & Usadel, B. Quantitation in Mass-Spectrometry-Based Proteomics. Annual Review of Plant Biology 61, 491–516 (2010).