Publikationen von Sebastian Proost

Zeitschriftenartikel (18)

1.
Zeitschriftenartikel
Julca, I., Ferrari, C., Flores-Tornero, M., Proost, S., Lindner, A.-C., Hackenberg, D., Steinbachová, L., Michaelidis, C., Gomes Pereira, S., Misra, C. S., Kawashima, T., Borg, M., Berger, F., Goldberg, J., Johnson, M., Honys, D., Twell, D., Sprunck, S., Dresselhaus, T., Becker, J. D. & Mutwil, M. Comparative transcriptomic analysis reveals conserved programmes underpinning organogenesis and reproduction in land plants. Nature Plants 7, 1143–1159 (2021).
2.
Zeitschriftenartikel
Sujeeth, N., Mehterov, N., Gupta, S., Qureshi, M. K., Fischer, A., Proost, S., Omidbakhshfard, M. A., Obata, T., Benina, M., Staykov, N., Balazadeh, S., Walther, D., Fernie, A. R., Mueller-Roeber, B., Hille, J. & Gechev, T. S. A novel seed plants gene regulates oxidative stress tolerance in Arabidopsis thaliana. Cellular and Molecular Life Sciences 77, 705–718 (2020).
3.
Zeitschriftenartikel
de Souza, L. P., Scossa, F., Proost, S., Bitocchi, E., Papa, R., Tohge, T. & Fernie, A. R. Multi-tissue integration of transcriptomic and specialized metabolite profiling provides tools for assessing the common bean (Phaseolus vulgaris) metabolome. The Plant Journal 97, 1132–1153 (2019).
4.
Zeitschriftenartikel
Ferrari, C., Proost, S., Janowski, M., Becker, J., Nikoloski, Z., Bhattacharya, D., Price, D., Tohge, T., Bar-Even, A., Fernie, A. R., Stitt, M. & Mutwil, M. Kingdom-wide comparison reveals the evolution of diurnal gene expression in Archaeplastida. Nature Communications 10, (2019).
5.
Zeitschriftenartikel
Flores-Tornero, M., Proost, S., Mutwil, M., Scutt, C. P., Dresselhaus, T. & Sprunck, S. Transcriptomics of manually isolated Amborella trichopoda egg apparatus cells. Plant Reproduction 32, 15–27 (2019).
6.
Zeitschriftenartikel
Rosado-Souza, L., Proost, S., Moulin, M., Bergmann, S., Bocobza, S. E., Aharoni, A., Fitzpatrick, T. B., Mutwil, M., Fernie, A. R. & Obata, T. Appropriate Thiamin Pyrophosphate Levels Are Required for Acclimation to Changes in Photoperiod. Plant Physiology 180, 185–197 (2019).
7.
Zeitschriftenartikel
Janowski, M., Zoschke, R., Scharff, L. B., Martinez-Jaime, S., Ferrari, C., Proost, S., Ng Wei Xiong, J., Omranian, N., Musialak-Lange, M., Nikoloski, Z., Graf, A., Schöttler, M. A., Sampathkumar, A., Vaid, N. & Mutwil, M. AtRsgA from Arabidopsis thaliana is important for maturation of the small subunit of the chloroplast ribosome. The Plant Journal 96, 404–420 (2018).
8.
Zeitschriftenartikel
Ferrari, C., Proost, S., Ruprecht, C. & Mutwil, M. PhytoNet: comparative co-expression network analyses across phytoplankton and land plants. Nucleic Acids Research 46, W76–W83 (2018).
9.
Zeitschriftenartikel
Proost, S. & Mutwil, M. CoNekT: an open-source framework for comparative genomic and transcriptomic network analyses. Nucleic Acids Research 46, W133–W140 (2018).
10.
Zeitschriftenartikel
Proost, S., Krawczyk, A. & Mutwil, M. LSTrAP: efficiently combining RNA sequencing data into co-expression networks. BMC Bioinformatics 18, (2017).
11.
Zeitschriftenartikel
Ruprecht, C., Proost, S., Hernandez-Coronado, M., Ortiz-Ramirez, C., Lang, D., Rensing, S. A., Becker, J. D., Vandepoele, K. & Mutwil, M. Phylogenomic analysis of gene co-expression networks reveals the evolution of functional modules. The Plant Journal 90, 447–465 (2017).
12.
Zeitschriftenartikel
Ruprecht, C., Vaid, N., Proost, S., Persson, S. & Mutwil, M. Beyond Genomics: Studying Evolution with Gene Coexpression Networks. Trends in Plant Science 22, 298–307 (2017).
13.
Zeitschriftenartikel
Sibout, R., Proost, S., Hansen, B. O., Vaid, N., Giorgi, F. M., Ho-Yue-Kuang, S., Legee, F., Cezart, L., Bouchabke-Coussa, O., Soulhat, C., Provart, N., Pasha, A., Le Bris, P., Roujol, D., Hofte, H., Jamet, E., Lapierre, C., Persson, S. & Mutwil, M. Expression atlas and comparative coexpression network analyses reveal important genes involved in the formation of lignified cell wall in Brachypodium distachyon. New Phytologist 215, 1009–1025 (2017).
14.
Zeitschriftenartikel
Swiadek, M., Proost, S., Sieh, D., Yu, J., Todesco, M., Jorzig, C., Cubillos, A., Plötner, B., Nikoloski, Z., Chae, E., Giavalisco, P., Fischer, A., Schröder, F., Kim, S.-T., Weigel, D. & Laitinen, R. Novel allelic variants in ACD6 cause hybrid necrosis in local collection of Arabidopsis thaliana. New Phytologist 213, 900–915 (2017).
15.
Zeitschriftenartikel
Proost, S. & Mutwil, M. Tools of the trade: studying molecular networks in plants. Current Opinion in Plant Biology 30, 143–150 (2016).
16.
Zeitschriftenartikel
Omidbakhshfard, M. A., Proost, S., Fujikura, U. & Mueller-Roeber, B. Growth-Regulating Factors (GRFs): A Small Transcription Factor Family with Important Functions in Plant Biology. Molecular Plant 8, 998–1010 (2015).
17.
Zeitschriftenartikel
Proost, S., Van Bel, M., Vaneechoutte, D., Van de Peer, Y., Inze, D., Mueller-Roeber, B. & Vandepoele, K. PLAZA 3.0: an access point for plant comparative genomics. Nucleic Acids Research 43, D974–D981 (2015).
18.
Zeitschriftenartikel
Balazadeh, S., Schildhauer, J., Araujo, W. L., Munne-Bosch, S., Fernie, A. R., Proost, S., Humbeck, K. & Mueller-Roeber, B. Reversal of senescence by N resupply to N-starved Arabidopsis thaliana: transcriptomic and metabolomic consequences. Journal of Experimental Botany 65, 3975–3992 (2014).

Buchkapitel (1)

19.
Buchkapitel
Proost, S. & Mutwil, M. in Plant Genomics Databases: Methods and Protocols (Hrsg. van Dijk & D.J, A.) 1533, 213–227 (Springer New York, 2017).
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