Suchergebnisse

Scossa, F., Alseekh, S. & Fernie, A. R. Integrating multi-omics data for crop improvement. Journal of Plant Physiology 257, (2021).

Alseekh, S., Scossa, F. & Fernie, A. R. Mobile Transposable Elements Shape Plant Genome Diversity. Trends in Plant Science 25, 1062–1064 (2020).

Karagiannis, E., Michailidis, M., Tanou, G., Scossa, F., Sarrou, E., Stamatakis, G., Samiotaki, M., Martens, S., Fernie, A. R. & Molassiotis, A. Decoding altitude-activated regulatory mechanisms occurring during apple peel ripening. Horticulture Research 7, (2020).

Karagiannis, E., Tanou, G., Scossa, F., Samiotaki, M., Michailidis, M., Manioudaki, M., Laurens, F., Job, D., Fernie, A. R., Orsel, M. & Molassiotis, A. Systems-Based Approaches to Unravel Networks and Individual Elements Involved in Apple Superficial Scald. Frontiers in Plant Science 11, (2020).

Scossa, F. & Fernie, A. R. The evolution of metabolism: How to test evolutionary hypotheses at the genomic level. Computational and Structural Biotechnology Journal 18, 482–500 (2020).

Tohge, T., Scossa, F., Wendenburg, R., Frasse, P., Balbo, I., Watanabe, M., Alseekh, S., Jadha, S. S., Delfin, J. C., Lohse, M., Giavalisco, P., Usadel, B., Zhang, Y. J., Luo, J., Bouzayen, M. & Fernie, A. R. Exploiting natural variation in tomato to define pathway structure and metabolic regulation of fruit polyphenolics in the lycopersicum complex. Molecular Plant 13, 1027–1046 (2020).

Zhang, W., Zhang, Y., Qiu, H., Guo, Y., Wan, H., Zhang, X., Scossa, F., Alseekh, S., Zhang, Q., Wang, P., Xu, L., Schmidt, M. H.-W., Jia, X., Li, D., Zhu, A., Guo, F., Chen, W., Ni, D., Usadel, B., Fernie, A. R. & Wen, W. Genome assembly of wild tea tree DASZ reveals pedigree and selection history of tea varieties. Nature Communications 11, (2020).

de Souza, L. P., Scossa, F., Proost, S., Bitocchi, E., Papa, R., Tohge, T. & Fernie, A. R. Multi-tissue integration of transcriptomic and specialized metabolite profiling provides tools for assessing the common bean (Phaseolus vulgaris) metabolome. The Plant Journal 97, 1132–1153 (2019).

Scossa, F., Roda, F., Tohge, T., Georgiev, M. I. & Fernie, A. R. The Hot and the Colorful: Understanding the Metabolism, Genetics and Evolution of Consumer Preferred Metabolic Traits in Pepper and Related Species. Critical Reviews in Plant Sciences 38, 339–381 (2019).

Kou, S., Chen, L., Tu, W., Scossa, F., Wang, Y., Liu, J., Fernie, A. R., Song, B. & Xie, C. The arginine decarboxylase gene ADC1, associated to the putrescine pathway, plays an important role in potato cold-acclimated freezing tolerance as revealed by transcriptome and metabolome analyses. The Plant Journal 96, 1283–1298 (2018).

Scossa, F., Benina, M., Alseekh, S., Zhang, Y. J. & Fernie, A. R. The Integration of Metabolomics and Next-Generation Sequencing Data to Elucidate the Pathways of Natural Product Metabolism in Medicinal Plants. Planta Media 84, 855–873 (2018).

Scossa, F. & Fernie, A. R. How fruit ripening is ENCODEd. Nature Plants 4, 744–745 (2018).

Shnaider, Y., Mitra, D., Miller, G., Baniel, A., Doniger, T., Kuhalskaya, A., Scossa, F., Fernie, A. R., Brotman, Y. & Perl-Treves, R. Cucumber ovaries inhibited by dominant fruit express a dynamic developmental program, distinct from either senescence-determined or fruit-setting ovaries. The Plant Journal 96, 651–669 (2018).

Zhang, Y. J., Swart, C., Alseekh, S., Scossa, F., Jiang, L., Obata, T., Graf, A. & Fernie, A. R. The Extra-Pathway Interactome of the TCA Cycle: Expected and Unexpected Metabolic Interactions. Plant Physiology 177, 966–979 (2018).

Alseekh, S., Tong, H. (Mathematical Modelling and Systems Biology - Nikoloski, Cooperative Research Groups, Max Planck Institute of Molecular Plant Physiology, Max Planck Society), H., Scossa, F., Brotman, Y., Vigroux, F., Tohge, T., Ofner, I., Zamir, D., Nikoloski, Z. & Fernie, A. R. Canalization of Tomato Fruit Metabolism. Plant Cell 29, 2753–2765 (2017).

Tanou, G., Minas, I. S., Scossa, F., Belghazi, M., Xanthopoulou, A., Ganopoulos, I., Madesis, P., Fernie, A. R. & Molassiotis, A. Exploring priming responses involved in peach fruit acclimation to cold stress. Scientific Reports 7, (2017).

Bustamante, C. A., Monti, L. L., Gabilondo, J., Scossa, F., Valentini, G., Budde, C. O., Lara, M. V., Fernie, A. R. & Drincovich, M. F. Differential Metabolic Rearrangements after Cold Storage Are Correlated with Chilling Injury Resistance of Peach Fruits. Frontiers in Plant Science 7, (2016).

Scossa, F., Brotman, Y., de Abreu e Lima, F., Willmitzer, L., Nikoloski, Z., Tohge, T. & Fernie, A. R. Genomics-based strategies for the use of natural variation in the improvement of crop metabolism. Plant Science 242, 47–64 (2016).

Rosado-Souza, L., Scossa, F., Chaves, I. S., Kleessen, S., Salvador, L. F. D., Milagre, J. C., Finger, F., Bhering, L. L., Sulpice, R., Araujo, W. L., Nikoloski, Z., Fernie, A. R. & Nunes-Nesi, A. Exploring natural variation of photosynthetic, primary metabolism and growth parameters in a large panel of Capsicum chinense accessions. Planta 242, 677–691 (2015).

Alseekh, S., Tohge, T., Wendenburg, R., Scossa, F., Omranian, N., Li, J., Kleessen, S., Giavalisco, P., Pleban, T., Mueller-Roeber, B., Zamir, D., Nikoloski, Z. & Fernie, A. R. Identification and mode of inheritance of quantitative trait Loci for secondary metabolite abundance in tomato. The Plant Cell 27, 485–512 (2015).