Publikationen von S. Alseekh

Zeitschriftenartikel (107)

1.
Zeitschriftenartikel
Zhu, F., Alseekh, S., Wen, W., Cheng, Y. & Fernie, A. R. Genome-wide association studies of Arabidopsis dark-induced senescence reveals signatures of autophagy in metabolic reprogramming. Autophagy (2021). doi:10.1080/15548627.2021.2003041
2.
Zeitschriftenartikel
Fernie, A. R. & Alseekh, S. Unravelling the molecular networks that regulate kiwifruit flavor. New Phytologist (2021). doi:10.1111/nph.17740
3.
Zeitschriftenartikel
Wang, J. Y., Alseekh, S., Xiao, T., Ablazov, A., de Souza, L. P., Fiorilli, V., Anggarani, M., Lin, P.-Y., Votta, C., Novero, M., Jamil, M., Lanfranco, L., Hsing, Y.-I. C., Blilou, I., Fernie, A. & Al-Babili, S. Multi-omics approaches explain the growth-promoting effect of the apocarotenoid growth regulator zaxinone in rice. Communications Biology 4, (2021).
4.
Zeitschriftenartikel
Zhu, F., Alseekh, S., Koper, K., Tong, H., Nikoloski, Z., Naake, T., Liu, H., Yan, J., Brotman, Y., Wen, W., Maeda, H., Cheng, Y. & Fernie, A. R. Genome-wide association of the metabolic shifts underpinning dark-induced senescence in Arabidopsis. The Plant Cell (2021). doi:10.1093/plcell/koab251
5.
Zeitschriftenartikel
Aarabi, F., Rakpenthai, A., Barahimipour, R., Gorka, M., Alseekh, S., Zhang, Y. J., Salem, M. A., Brückner, F., Omranian, N., Watanabe, M., Nikoloski, Z., Giavalisco, P., Tohge, T., Graf, A., Fernie, A. R. & Hoefgen, R. Sulfur Deficiency Induced genes affect seed protein accumulation and composition under sulfate deprivation. Plant Physiology (2021). doi:10.1093/plphys/kiab386
6.
Zeitschriftenartikel
Bellucci, E., Aguilar, O. M., Alseekh, S., Bett, K., Brezeanu, C., Cook, D., De la Rosa, L., Delledonne, M., Dostatny, D. F., Ferreira, J. J., Geffroy, V., Ghitarrini, S., Kroc, M., Kumar Agrawal, S., Logozzo, G., Marino, M., Mary-Huard, T., McClean, P., Meglič, V., Messer, T., Muel, F., Nanni, L., Neumann, K., Servalli, F., Străjeru, S., Varshney, R. K., Vasconcelos, M. W., Zaccardelli, M., Zavarzin, A., Bitocchi, E., Frontoni, E., Fernie, A. R., Gioia, T., Graner, A., Guasch, L., Prochnow, L., Opperman, M., Susek, K., Tenaillon, M. & Papa, R. The INCREASE project: Intelligent Collections of Food-Legume Genetic Resources for European Agrofood Systems. The Plant Journal 108, 646–660 (2021).
7.
Zeitschriftenartikel
Alseekh, S., Aharoni, A., Brotman, Y., Contrepois, K., D’Auria, J., Ewald, J., C. Ewald, J., Fraser, P. D., Giavalisco, P., Hall, R. D., Heinemann, M., Link, H., Luo, J., Neumann, S., Nielsen, J., de Souza, L. P., Saito, K., Sauer, U., Schroeder, F. C., Schuster, S., Siuzdak, G., Skirycz, A., Sumner, L. W., Snyder, M. P., Tang, H., Tohge, T., Wang, Y., Wen, W., Wu, S., Xu, G., Zamboni, N. & Fernie, A. R. Mass spectrometry-based metabolomics: a guide for annotation, quantification and best reporting practices. Nature Methods 18, 747–756 (2021).
8.
Zeitschriftenartikel
Duarte, G. T., Pandey, P. K., Vaid, N., Alseekh, S., Fernie, A. R., Nikoloski, Z. & Laitinen, R. Plasticity of rosette size in response to nitrogen availability is controlled by an RCC1-family protein. Plant, Cell and Environment 44, 3398–3411 (2021).
9.
Zeitschriftenartikel
Guadalupe Dominguez, P., Conti, G., Duffy, T., Insani, M., Alseekh, S., Asurmendi, S., Fernie, A. R. & Carrari, F. Multi-omics analyses reveal the roles of the ASR1 transcription factor in tomato fruits. Journal of Experimental Botany 72, 6409–6509 (2021).
10.
Zeitschriftenartikel
Moreno, J. C., Rojas, B. E., Vicente, R., Gorka, M., Matz, T., Kosmacz, M., Peralta-Ariza, J. S., Zhang, Y. J., Alseekh, S., Childs, D., Luzarowski, M., Nikoloski, Z., Zarivach, R., Walther, D., Hartman, M. D., Figueroa, C. M., Iglesias, A. A., Fernie, A. R. & Skirycz, A. Tyr-Asp inhibition of glyceraldehyde 3-phosphate dehydrogenase affects plant redox metabolism. EMBO Journal (2021). doi:10.15252/embj.2020106800
11.
Zeitschriftenartikel
Zimmermann, S. E., Benstein, R. M., Flores-Tornero, M., Blau, S., Anoman, A. D., Rosa-Téllez, S., Gerlich, S. C., Salem, M. A., Alseekh, S., Kopriva, S., Wewer, V., Flügge, U.-I., Jacoby, R. P., Fernie, A. R., Giavalisco, P., Ros, R. & Krueger, S. The phosphorylated pathway of serine biosynthesis links plant growth with nitrogen metabolism. Plant Physiology 186, 1487–1506 (2021).
12.
Zeitschriftenartikel
de Souza, L. P., Alseekh, S., Scossa, F. & Fernie, A. R. Ultra-high-performance liquid chromatography high-resolution mass spectrometry variants for metabolomics research. Nature Methods 18, 733–746 (2021).
13.
Zeitschriftenartikel
Alseekh, S., Kostova, D., Bulut, M. & Fernie, A. R. Genome-wide association studies: assessing trait characteristics in model and crop plants. Cellular and Molecular Life Sciences 78, 5743–5754 (2021).
14.
Zeitschriftenartikel
Breitel, D., Brett, P., Alseekh, S., Fernie, A. R., Butelli, E. & Martin, C. Diverting tyrosine: Data from untargeted metabolic analysis of tomato fruit accumulating L-DOPA. Data in Brief 34, (2021).
15.
Zeitschriftenartikel
Brotman, Y., Llorente-Wiegand, C., Oyong, G., Badoni, S., Misra, G., Anacleto, R., Parween, S., Pasion, E., Tiozon Jr., R. N., Anonuevo, J. J., Krishna deGuzman, M., Alseekh, S., Mbanjo, E. G. N., Boyd, L. A., Fernie, A. R. & Sreenivasulu, N. The genetics underlying metabolic signatures in a brown rice diversity panel and their vital role in human nutrition. The Plant Journal 106, 507–527 (2021).
16.
Zeitschriftenartikel
Bulut, M., Fernie, A. R. & Alseekh, S. Large-scale Multi-omics Genome-wide Association Studies (Mo-GWAS): Guidelines for Sample Preparation and Normalization. Journal of Visualized Experiments 173, (2021).
17.
Zeitschriftenartikel
Fernie, A. R., Alseekh, S., Liu, J. & Yan, J. Using Precision Phenotyping to Inform de novo Domestication. Plant Physiology 186, 1397–1411 (2021).
18.
Zeitschriftenartikel
Jiang, L., Yoshida, T., Stiegert, S., Yu, J., Alseekh, S., Lenhard, M., Pérez-Alfocea, F. & Fernie, A. R. Multi-omics approach reveals the contribution of KLU to leaf longevity and drought tolerance. Plant Physiology 185, 352–368 (2021).
19.
Zeitschriftenartikel
Jorge, T. F., Ramalho, J. C., Alseekh, S., Pais, I. P., Leitão, A. E., Rodrigues, A. P., Scotti-Campos, P., Ribeiro-Barros, A. I., Fernie, A. R. & António, C. Will Casuarina glauca Stress Resilience Be Maintained in the Face of Climate Change? Metabolites 11, (2021).
20.
Zeitschriftenartikel
Krahmer, J., Abbas, A., Mengin, V., Ishihara, H., Romanowski, A., Furniss, J. J., Moraes, T. A., Krohn, N., Annunziata, M. G., Feil, R., Alseekh, S., Obata, T., Fernie, A. R., Stitt, M. & Halliday, K. J. Phytochromes control metabolic flux, and their action at the seedling stage determines adult plant biomass. Journal of Experimental Botany 72, 3263–3278 (2021).
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