Casartelli, A., Melino, V. J., Baumann, U., Riboni, M., Suchecki, R., Jayasinghe, N. S., Mendis, H., Watanabe, M., Erban, A., Zuther, E., Hoefgen, R., Roessner, U., Okamoto, M. & Heuer, S. Opposite fates of the purine metabolite allantoin under water and nitrogen limitations in bread wheat. Plant Molecular Biology 99, 477–497 (2019).

Flis, A., Mengin, V., Ivakov, A., Mugford, S. T., Hubberten, H. M., Encke, B., Krohn, N., Höhne, M., Feil, R., Hoefgen, R., Lunn, J. E., Millar, A. J., Smith, A. M., Sulpice, R. & Stitt, M. Multiple circadian clock outputs regulate diel turnover of carbon and nitrogen reserves. Plant, Cell and Environment 42, 549–573 (2019).

Heyneke, E., Watanabe, M., Erban, A., Duan, G., Buchner, P., Walther, D., Kopka, J., Hawkesford, M. J. & Hoefgen, R. Effect of Senescence Phenotypes and Nitrate Availability on Wheat Leaf Metabolome during Grain Filling. Agronomy 9, (2019).

Matz, J. M., Watanabe, M., Falade, M., Tohge, T., Hoefgen, R. & Matuschewski, K. Plasmodium Para-Aminobenzoate Synthesis and Salvage Resolve Avoidance of Folate Competition and Adaptation to Host Diet. Cell Reports 26, 356–363 (2019).

Riedel, S., Siemiatkowska, B., Watanabe, M., Müller, C. S., Schünemann, V., Hoefgen, R. & Leimkühler, S. The ABCB7-Like Transporter PexA in Rhodobacter capsulatus Is Involved in the Translocation of Reactive Sulfur Species. Frontiers in Microbiology 10, (2019).

Casartelli, A., Riewe, D., Hubberten, H. M., Altmann, T., Hoefgen, R. & Heuer, S. Exploring traditional aus-type rice for metabolites conferring drought tolerance. Rice 11, (2018).

Naumann, M., Hubberten, H. M., Watanabe, M., Hänsch, R., Schöttler, M. A. & Hoefgen, R. Sulfite Reductase Co-suppression in Tobacco Reveals Detoxification Mechanisms and Downstream Responses Comparable to Sulfate Starvation. Frontiers in Plant Science 9, (2018).

Pinsorn, P., Oikawa, A., Watanabe, M., Sasaki, R., Ngamchuachit, P., Hoefgen, R., Saito, K. & Sirikantaramas, S. Metabolic variation in the pulps of two durian cultivars: Unraveling the metabolites that contribute to the flavor. Food Chemistry 268, 118–125 (2018).

Salem, M. A., Li, Y., Bajdzienko, K., Fisahn, J., Watanabe, M., Hoefgen, R., Schöttler, M. A. & Giavalisco, P. RAPTOR controls developmental growth transitions by altering the hormonal and metabolic balance. Plant Physiology 177, 565–593 (2018).

Watanabe, M., Netzer, F., Tohge, T., Orf, I., Brotman, Y., Dubbert, D., Fernie, A. R., Rennenberg, H., Hoefgen, R. & Herschbach, C. Metabolome and Lipidome Profiles of Populus x canescens Twig Tissues During Annual Growth Show Phospholipid- Linked Storage and Mobilization of C, N, and S. Frontiers in Plant Science 9, (2018).

Watanabe, M., Tohge, T., Fernie, A. R. & Hoefgen, R. The Effect of Single and Multiple SERAT Mutants on Serine and Sulfur Metabolism. Frontiers in Plant Science 9, (2018).

Whitcomb, S. J., Nguyen, H. C., Brückner, F., Hesse, H. & Hoefgen, R. CYSTATHIONINE GAMMA-SYNTHASE activity in rice is developmentally regulated and strongly correlated with sulfate. Plant Science 270, 234–244 (2018).

Fichtner, F., Barbier, F. F., Feil, R., Watanabe, M., Annunziata, M. G., Chabikwa, T. G., Hoefgen, R., Stitt, M., Beveridge, C. A. & Lunn, J. E. Trehalose 6-phosphate is involved in triggering axillary bud outgrowth in garden pea (Pisum sativum L.). The Plant Journal 92, 611–623 (2017).

Heyneke, E., Watanabe, M., Erban, A., Duan, G. Y., Buchner, P., Walther, D., Kopka, J., Hawkesford, M. J. & Hoefgen, R. Characterization of the Wheat Leaf Metabolome during Grain Filling and under Varied N-Supply. Frontiers in Plant Science 8, (2017).

Ishiga, Y., Watanabe, M., Ishiga, T., Tohge, T., Matsuura, T., Ikeda , Y., Hoefgen, R., Fernie, A. R. & Mysore, K. S. The SAL-PAP Chioroplast Retrograde Pathway Contributes to Plant Immunity by Regulating Glucosinolate Pathway and Phytohormone Signaling. Molecular Plant-Microbe Interactions 30, 829–841 (2017).

Ploetner, B., Nurmi, M., Fischer, A., Watanabe, M., Schneeberger, K., Holm, S., Vaid, N., Schöttler, M. A., Walther, D., Hoefgen, R., Weigel, D. & Laitinen, R. Chlorosis caused by two recessively interacting genes reveals a role of RNA helicase in hybrid breakdown in Arabidopsis thaliana. The Plant Journal 91, 251–262 (2017).

Prodhan, M. A., Jost, R., Watanabe, M., Hoefgen, R., Lambers, H. & Finnegan, P. M. Tight control of sulfur assimilation: an adaptive mechanism for a plant from a severely phosphorus-impoverished habitat. New Phytologist 215, 1068–1079 (2017).

Moschen, S., Bengoa Luoni, S., Di Rienzo, J. A., del Pilar Caro, M., Tohge, T., Watanabe, M., Hollmann, J., Gonzalez, S., Rivarola, M., Garcia-Garcia, F., Dopazo, J., Esteban Hopp, H., Hoefgen, R., Fernie, A. R., Paniego, N., Fernandez, P. & Heinz, R. A. Integrating transcriptomic and metabolomic analysis to understand natural leaf senescence in sunflower. Plant Biotechnology Journal 14, 719–734 (2016).

Aarabi, F., Kusajima, M., Tohge, T., Konishi, T., Gigolashvili, T., Takamune, M., Sasazaki, Y., Watanabe, M., Nakashita, H., Fernie, A. R., Saito, K., Takahashi, H., Hubberten, H. M., Hoefgen, R. & Maruyama-Nakashita, A. Sulfur deficiency–induced repressor proteins optimize glucosinolate biosynthesis in plants. Science Advances 2, (2016).

Figueroa, C. M., Feil, R., Ishihara, H., Watanabe, M., Kolling, K., Krause, U., Höhne, M., Encke, B., Plaxton, W. C., Zeeman, S. C., Li, Z., Schulze, W. X., Hoefgen, R., Stitt, M. & Lunn, J. E. Trehalose 6-phosphate coordinates organic and amino acid metabolism with carbon availability. The Plant Journal 85, 410–423 (2016).