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Zeitschriftenartikel (13)

1.
Zeitschriftenartikel
Lohse, M., Nagel, A., Herter, T., May, P., Schroda, M., Zrenner, R., Tohge, T., Fernie, A. R., Stitt, M. & Usadel, B. Mercator: a fast and simple web server for genome scale functional annotation of plant sequence data. Plant Cell Environment 37, 1250–1258 (2014).
2.
Zeitschriftenartikel
Usadel, B., Schwacke, R., Nagel, A. & Kersten, B. GabiPD – The GABI Primary Database integrates plant proteomic data with gene-centric information. Frontiers in Plant Science 3, (2012).
3.
Zeitschriftenartikel
Lohse, M., Bolger, A. M., Nagel, A., Fernie, A. R., Lunn, J. E., Stitt, M. & Usadel, B. RobiNA: a user-friendly, integrated software solution for RNA-Seq-based transcriptomics. Nucleic Acids Research 40, W622–W627 (2012).
4.
Zeitschriftenartikel
Nagel, A., Lohse, M., Bolger, A., Bolger, A. M., Stitt, M. & Usadel, B. Visualizing large, high-throughput datasets based on the cognitive representation of biological pathways. Human Vision and Electronic Imaging Xvi 7865, 78650h (2011).
5.
Zeitschriftenartikel
Durek, P., Schmidt, R., Heazlewood, J. L., Jones, A., MacLean, D., Nagel, A., Kersten, B. & Schulze, W. X. PhosPhAt: the Arabidopsis thaliana phosphorylation site database. An update. Nucleic Acids Research 38, D828–D834 (2010).
6.
Zeitschriftenartikel
Lohse, M., Nunes-Nesi, A., Krueger, P., Nagel, A., Hannemann, J., Giorgi, F. M., Childs, L., Osorio, S., Walther, D., Selbig, J., Sreenivasulu, N., Stitt, M., Fernie, A. R. & Usadel, B. Robin: An Intuitive Wizard Application for R-Based Expression Microarray Quality Assessment and Analysis. Plant Physiology 153, 642–651 (2010).
7.
Zeitschriftenartikel
Riano-Pachon, D. M., Nagel, A., Neigenfind, J., Wagner, R., Basekow, R., Weber, E., Mueller-Roeber, B., Diehl, S. & Kersten, B. GabiPD: the GABI primary database-a plant integrative 'omics' database. Nucleic Acids Research 37, 954–959 (2009).
8.
Zeitschriftenartikel
Usadel, B., Poree, F., Nagel, A., Lohse, M., Czedik-Eysenberg, A. & Stitt, M. A guide to using MapMan to visualize and compare Omics data in plants: a case study in the crop species, Maize. Plant Cell and Environment 32, 1211–1229 (2009).
9.
Zeitschriftenartikel
Kersten, B., Nagel, A., Riano-Pachon, D. M., Neigenfind, J., Weber, E., Wagner, R. & Diehl, S. Die GABI-Primaerdatenbank GabiPD - Komplexe Integration von GABI-Daten aus Modell- und Nutzpflanzen. GenomXPress: Informationen aus der Deutschen Genomforschung 1, 17–19 (2008).
10.
Zeitschriftenartikel
Lohse, M., Krueger, P., Hannemann, J., Nagel, A., Stitt, M., Walther, D. & Usadel, B. Robin - Microarray Experimentanalyse leicht gemacht. GenomXPress: Informationen aus der Deutschen Genomforschung 3, 16–17 (2008).
11.
Zeitschriftenartikel
Usadel, B., Nagel, A., Steinhauser, D., Gibon, Y., Blaesing, O. E., Redestig, H., Sreenivasulu, N., Krall, L., Hannah, M. A., Poree, F., Fernie, A. R. & Stitt, M. PageMan: An interactive ontology tool to generate, display, and annotate overview graphs for profiling experiments. BMC Bioinformatics 7, 535 (2006).
12.
Zeitschriftenartikel
Usadel, B., Nagel, A., Thimm, O., Redestig, H., Bläsing, O. E., Palacios-Rojas, N., Selbig, J., Hannemann, J., Piques, M. C., Steinhauser, D., Scheible, W.-R., Gibon, Y., Morcuende, R., Weicht, D., Meyer, S. & Stitt, M. Extension of the visualization tool MapMan to allow statistical analysis of arrays, display of coresponding genes, and comparison with known responses. Plant Physiology 138, 1195–1204 (2005).
13.
Zeitschriftenartikel
Thimm, O., Blaesing, O., Gibon, Y., Nagel, A., Meyer, S., Krueger, P., Selbig, J., Mueller, L. A., Rhee, S. Y. & Stitt, M. MAPMAN: a user-driven tool to display genomics data sets onto diagrams of metabolic pathways and other biological processes. Plant Journal 37, 914–939 (2004).
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