Publikationen von S. Alseekh

Omidbakhshfard, M. A., Sokolowska, E., Di Vittori, V., de Souza, L. P., Kuhalskaya, A., Brotman, Y., Alseekh, S., Fernie, A. R. & Skirycz, A. Multi-omics analysis of early leaf development in Arabidopsis thaliana. Patterns 2, (2021).

Ren, Y., Li, M., Guo, S., Sun, H., Zhao, J., Zhang, J., Liu, G., He, H., Tian, S., Yu, Y., Gong, G., Zhang, H., Zhang, X., Alseekh, S., Fernie, A. R., Scheller, H. V. & Xu, Y. Evolutionary Gain of Oligosaccharide Hydrolysis and Sugar Transport Enhanced Carbohydrate Partitioning in Sweet Watermelon Fruits. The Plant Cell 33, 1554–1573 (2021).

Salem, M. A., Zayed, A., Alseekh, S., Fernie, A. R. & Giavalisco, P. The integration of MS-based metabolomics and multivariate data analysis allows for improved quality assessment of Zingiber officinale Roscoe. Phytochemistry 190, (2021).

Scossa, F., Alseekh, S. & Fernie, A. R. Integrating multi-omics data for crop improvement. Journal of Plant Physiology 257, (2021).

Staykov, N. S., Angelov, M., Petrov, V., Minkov, P., Kanojia, A., Guinan, K. J., Alseekh, S., Fernie, A. R., Sujeeth, N. & Gechev, T. S. An Ascophyllum nodosum-Derived Biostimulant Protects Model and Crop Plants from Oxidative Stress. Metabolites 11, (2021).

Di Vittori, V., Bitocchi, E., Rodriguez, M., Alseekh, S., Bellucci, E., Nanni, L., Gioia, T., Marzario, S., Logozzo, G., Rossato, M., De Quattro, C., Murgia, M. L., Ferreira, J. J., Campa, A., Xu, C., Fiorani, F., Sampathkumar, A., Fröhlich, A., Attene, G., Delledonne, M., Usadel, B., Fernie, A. R., Rau, D. & Papa, R. Pod indehiscence in common bean is associated to the fine regulation of PvMYB26. Journal of Experimental Botany 72, 1617–1633 (2020).

Sewelam, N., Brilhaus, D., Bräutigam, A., Alseekh, S., Fernie, A. R. & Maurino, V. G. Molecular plant responses to combined abiotic stresses put a spotlight on unknown and abundant genes. Journal of Experimental Botany 71, 5098–5112 (2020).

Aksenov, A. A., Laponogov, I., Zhang, Z., Doran, S. L. F., Belluomo, I., Veselkov, D., Bittremieux, W., Nothias, L. F., Nothias-Esposito, M., Maloney, K. N., Misra, B. B., Melnik, A. V., Smirnov, A., Du, X., Jones, K. L., Dorrestein, K., Panitchpakdi, M., Ernst, M., van der Hooft, J. J. J., Gonzalez, M., Carazzone, C., Amézquita, A., Callewaert, C., Morton, J. T., Quinn, R. A., Bouslimani, A., Orio, A. A., Petras, D., Smania, A. M., Couvillion, S. P., Burnet, M. C., Nicora, C. D., Zink, E., Metz, T. O., Artaev, V., Humston-Fulmer, E., Gregor, R., Meijler, M. M., Mizrahi, I., Eyal, S., Anderson, B., Dutton, R., Lugan, R., Boulch, P. L., Guitton, Y., Prevost, S., Poirier, A., Dervilly, G., Le Bizec, B., Fait, A., Persi, N. S., Song, C., Gashu, K., Coras, R., Guma, M., Manasson, J., Scher, J. U., Barupal, D. K., Alseekh, S., Fernie, A. R., Mirnezami, R., Vasiliou, V., Schmid, R., Borisov, R. S., Kulikova, L. N., Knight, R., Wang, M., Hanna, G. B., Dorrestein, P. C. & Veselkov, K. Auto-deconvolution and molecular networking of gas chromatography-mass spectrometry data. Nature Biotechnology 39, 169–173 (2020).

Alseekh, S., de Souza, L. P., Benina, M. & Fernie, A. R. The Style and Substance of Plant Flavonoid decoration; Towards Defining both Structure and Function. Phytochemistry 174, (2020).

Alseekh, S., Ofner, I., Liu, Z., Osorio, S., Vallarino, J. G., Last, R. L., Zamir, D., Tohge, T. & Fernie, A. R. Quantitative trait loci analysis (QTL) of seed specialized metabolites reveals seed-specific flavonols and differential regulation of glycoalkaloid content in tomato. The Plant Journal 103, 2007–2024 (2020).

Alseekh, S., Scossa, F. & Fernie, A. R. Mobile Transposable Elements Shape Plant Genome Diversity. Trends in Plant Science 25, 1062–1064 (2020).

Breitel, D., Brett, P., Alseekh, S., Fernie, A. R., Butelli, E. & Martin, C. Metabolic engineering of tomato fruit enriched in L-DOPA. Metabolic Engineering 65, 185–196 (2020).

Correa, S. M., Alseekh, S., Atehortúa, L., Brotman, Y., Ríos-Estepa, R., Fernie, A. R. & Nikoloski, Z. Model-assisted identification of metabolic engineering strategies for Jatropha curcas lipid pathways. The Plant Journal 104, 76–95

de Souza, L. P., Alseekh, S., Brotman, Y. & Fernie, A. R. Network based strategies in metabolomics data analysis and interpretation: from molecular networking to biological interpretation. Expert Review of Proteomics 17, 243–255 (2020).

Fernie, A. R. & Alseekh, S. Tomato multiomics at aPEELing resolution. Nature Plants 6, 1394–1395 (2020).

Fernie, A. R. & Alseekh, S. Publisher Correction: Tomato multiomics at aPEELing resolution (Nature Plants, (2020), 10.1038/s41477-020-00807-8). Nature Plants 6, (2020).

Gutsch, A., Hendrix, S., Guerriero, G., Renaut, J., Lutts, S., Alseekh, S., Fernie, A. R., Hausman, J.-F., Vangronsveld, J., Cuypers, A. & Sergeant, K. Long-Term Cd Exposure Alters the Metabolite Profile in Stem Tissue of Medicago sativa. Cells 9, (2020).

Jiao, C., Sørensen, I., Sun, X., Sun, H., Behar, H., Alseekh, S., Philippe, G., Palacio Lopez, K., Sun, L., Reed, R., Jeon, S., Kiyonami, R., Zhang, S., Fernie, A. R., Brumer, H., Domozych, D. S., Fei, Z. & Rose, J. K. C. The Penium margaritaceum Genome: Hallmarks of the Origins of Land Plants. Cell 181, 1097–1111.e12 (2020).

Kuhalskaya, A., Wijesingha Ahchige, M., de Souza, L. P., Vallarino, J. G., Brotman, Y. & Alseekh, S. Network analysis provides insight into tomato lipid metabolism. Metabolites 10, (2020).

Li, Y., Chen, Y., Zhou, L., You, S., Deng, H., Chen, Y., Alseekh, S., Yuan, Y., Fu, R., Zhang, Z., Su, D., Fernie, A. R., Bouzayen, M., Ma, T., Liu, M. & Zhang, Y. MicroTom Metabolic Network: Rewiring Tomato Metabolic Regulatory Network throughout the Growth Cycle. Molecular Plant 13, 1203–1218 (2020).