Publikationen von H. Tong

Mbebi, A. J., Mercado, F., Hobby, D., Tong, H. & Nikoloski, Z. Advances in multi-trait genomic prediction approaches: classification, comparative analysis, and perspectives. Briefings in Bioinformatics 26, (2025).

Hobby, D., Tong, H., Heuermann, M., Mbebi, A. J., Laitinen, R. A. E., Dell’Acqua, M., Altmann, T. & Nikoloski, Z. Predicting plant trait dynamics from genetic markers. Nature Plants 11, 1018–1027 (2025).

Pieri, A., Beleggia, R., Gioia, T., Tong, H., Di Vittori, V., Frascarelli, G., Bitocchi, E., Nanni, L., Bellucci, E., Fiorani, F., Pecchioni, N., Marzario, S., De Quattro, C., Limongi, A. R., De Vita, P., Rossato, M., Schurr, U., David, J. L., Nikoloski, Z. & Papa, R. Transcriptomic response to nitrogen availability reveals signatures of adaptive plasticity during tetraploid wheat domestication. Plant Cell 36, 3809–3823 (2024).

Tong, H., Laitinen, R. A. E. & Nikoloski, Z. Predicting plasticity of rosette growth and metabolic fluxes in Arabidopsis thaliana. New Phytologist 240, 426–438 (2023).

Correa Cordoba, S., Tong, H., Burgos, A., Zhu, F., Alseekh, S., Fernie, A. R. & Nikoloski, Z. Identification of gene function based on models capturing natural variability of Arabidopsis thaliana lipid metabolism. Nature Communications 14, (2023).

Andreou, G. M., Messer, M., Tong, H., Nikoloski, Z. & Laitinen, R. A. E. Heritability of temperature-mediated flower size plasticity in Arabidopsis thaliana. Quantitative Plant Biology 4, (2023).

Mbebi, A. J., Breitler, J.-C., Bordeaux, M., Sulpice, R., McHale, M., Tong, H., Toniutti, L., Castillo, J. A., Bertrand, B. & Nikoloski, Z. A comparative analysis of genomic and phenomic predictions of growth-related traits in 3-way coffee hybrids. G3: Genes, Genomes, Genetics 12, (2022).

Tong, H., Nankar, A. N., Liu, J., Todorova, V., Ganeva, D., Grozeva, S., Tringovska, I., Pasev, G., Radeva-Ivanova, V., Gechev, T., Kostova, D. & Nikoloski, Z. Genomic prediction of morphometric and colorimetric traits in Solanaceous fruits. Horticulture Research 9, (2022).

Zhu, F., Alseekh, S., Koper, K., Tong, H., Nikoloski, Z., Naake, T., Liu, H., Yan, J., Brotman, Y., Wen, W., Maeda, H., Cheng, Y. & Fernie, A. R. Genome-wide association of the metabolic shifts underpinning dark-induced senescence in Arabidopsis. The Plant Cell 34, 557–578 (2021).

Mbebi, A. J., Tong, H. & Nikoloski, Z. L2,1-norm regularized multivariate regression model with applications to genomic prediction. Bioinformatics 37, 2896–2904 (2021).

Tong, H. & Nikoloski, Z. Machine learning approaches for crop improvement: Leveraging phenotypic and genotypic big data. Journal of Plant Physiology 257, (2021).

Tong, H., Küken, A. & Nikoloski, Z. Integrating molecular markers into metabolic models improves genomic selection for Arabidopsis growth. Nature Communications 11, (2020).

Cubillos, A., Tong, H., Alseekh, S., de Abreu e Lima, F., Yu, J., Fernie, A. R., Nikoloski, Z. & Laitinen, R. Inheritance patterns in metabolism and growth in diallel crosses of Arabidopsis thaliana from a single growth habitat. Heredity 120, 463–473 (2018).

Vallarino, J. G., de Abreu e Lima, F., Soria, C., Tong, H., Pott, D. M., Willmitzer, L., Fernie, A. R., Nikoloski, Z. & Osorio, S. Genetic diversity of strawberry germplasm using metabolomic biomarkers. Scientific Reports 8, (2018).

Wu, S., Tohge, T., Cuadros-Inostroza, A. C., Tong, H., Tenenboim, H., Kooke, R., Méret, M., Keurentjes, J. B., Nikoloski, Z., Fernie, A. R., Willmitzer, L. & Brotman, Y. Mapping the Arabidopsis Metabolic Landscape by Untargeted Metabolomics at Different Environmental Conditions. Molecular Plant 11, 118–134 (2018).

Alseekh, S., Tong, H., Scossa, F., Brotman, Y., Vigroux, F., Tohge, T., Ofner, I., Zamir, D., Nikoloski, Z. & Fernie, A. R. Canalization of Tomato Fruit Metabolism. Plant Cell 29, 2753–2765 (2017).

Tong, H., Küken, A., Razaghi-Moghadam, Z. & Nikoloski, Z. Characterization of effects of genetic variants via genome-scale metabolic modelling. Cellular and Molecular Life Sciences 78, 5123–5138 (2021).