Publikationen von J. Kopka

Sanchez, D. H., Schwabe, F., Erban, A., Udvardi, M. K. & Kopka, J. Comparative metabolomics of drought acclimation in model and forage legumes. Plant Cell and Environment 35, 136–149 (2012).

Siahpoosh, M. R., Sanchez, D. H., Schlereth, A., Scofield, G. N., Furbank, R. T., van Dongen, J. T. & Kopka, J. Modification of OsSUT1 gene expression modulates the salt response of rice Oryza sativa cv. Taipei 309. Plant Science 182, 101–111 (2012).

Clauss, K., von Roepenack-Lahaye, E., Boettcher, C., Roth, M. R., Welti, R., Erban, A., Kopka, J., Scheel, D., Milkowski, C. & Strack, D. Overexpression of Sinapine Esterase BnSCE3 in Oilseed Rape Seeds Triggers Global Changes in Seed Metabolism. Plant Physiology 155, 1127–1145 (2011).

Hackenberg, C., Kern, R., Huege, J., Stal, L. J., Tsuji, Y., Kopka, J., Shiraiwa, Y., Bauwe, H. & Hagemann, M. Cyanobacterial lactate oxidases serve as essential partners in N2 fixation and evolved into photorespiratory glycolate oxidases in plants. The Plant Cell 23, 2978–2990 (2011).

Huege, J., Goetze, J., Schwarz, D., Bauwe, H., Hagemann, M. & Kopka, J. Modulation of the Major Paths of Carbon in Photorespiratory Mutants of Synechocystis. PLoS One 6, e16278 (2011).

Moing, A., Aharoni, A., Biais, B., Rogachev, I., Meir, S., Brodsky, L., Allwood, J. W., Erban, A., Dunn, W. B., Kay, L., de Koning, S., de Vos, R. C. H., Jonker, H., Mumm, R., Deborde, C., Maucourt, M., Bernillon, S., Gibon, Y., Hansen, T. H., Husted, S., Goodacre, R., Kopka, J., Schjoerring, J. K., Rolin, D. & Hall, R. D. Extensive metabolic cross-talk in melon fruit revealed by spatial and developmental combinatorial metabolomics. New Phytologist 190, 683–696 (2011).

Sanchez, D. H., Pieckenstain, F. L., Escaray, F., Erban, A., Kraemer, U., Udvardi, M. K. & Kopka, J. Comparative ionomics and metabolomics in extremophile and glycophytic Lotus species under salt stress challenge the metabolic pre-adaptation hypothesis. Plant Cell and Environment 34, 605–617 (2011).

Sanchez, D. H., Pieckenstain, F. L., Szymanski, J., Erban, A., Bromke, M., Hannah, M. A., Kraemer, U., Kopka, J. & Udvardi, M. K. Comparative Functional Genomics of Salt Stress in Related Model and Cultivated Plants Identifies and Overcomes Limitations to Translational Genomics. PLoS One 6, e17094 (2011).

Schwarz, D., Nodop, A., Huege, J., Purfurst, S., Forchhammer, K., Michel, K. P., Bauwe, H., Kopka, J. & Hagemann, M. Metabolic and Transcriptomic Phenotyping of Inorganic Carbon Acclimation in the Cyanobacterium Synechococcus elongatus PCC 7942. Plant Physiology 155, 1640–1655 (2011).

Ebert, B., Zoller, D., Erban, A., Fehrle, I., Hartmann, J., Niehl, A., Kopka, J. & Fisahn, J. Metabolic profiling of Arabidopsis thaliana epidermal cells. Journal of Experimental Botany 61, 1321–1335 (2010).

Girin, T., El-Kafafi, E. S., Widiez, T., Erban, A., Hubberten, H.-M., Kopka, J., Hoefgen, R., Gojon, A. & Lepetit, M. Identification of Arabidopsis Mutants Impaired in the Systemic Regulation of Root Nitrate Uptake by the Nitrogen Status of the Plant. Plant Physiology 153, 1250–1260 (2010).

Hofmann, J., El Ashry, A., Anwar, S., Erban, A., Kopka, J. & Grundler, F. Metabolic profiling reveals local and systemic responses of host plants to nematode parasitism. Plant Journal 62, 1058–1071 (2010).

Hummel, J., Strehmel, N., Selbig, J., Walther, D. & Kopka, J. Decision tree supported substructure prediction of metabolites from GC-MS profiles. Metabolomics 6, 322–333 (2010).

Korn, M., Gärtner, T., Erban, A., Kopka, J., Selbig, J. & Hincha, D. K. Predicting Arabidopsis Freezing Tolerance and Heterosis in Freezing Tolerance from Metabolite Composition. Molecular Plant 3, 224–235 (2010).

Lugan, R., Niogret, M. F., Leport, L., Guegan, J. P., Larher, F. R., Savoure, A., Kopka, J. & Bouchereau, A. Metabolome and water homeostasis analysis of Thellungiella salsuginea suggests that dehydration tolerance is a key response to osmotic stress in this halophyte. Plant Journal 64, 215–229 (2010).

Parveen, I., Moorby, J. M., Fraser, M. D., Erban, A. & Kopka, J. Relationship between Grazing Lamb Growth Rate and Blood Plasma Analytes as Profiled by Gas Chromatography with Time-of-Flight Mass Spectrometry (GC-TOF/MS). Journal of Agricultural and Food Chemistry 58, 913–917 (2010).

Sanchez, D. H., Szymanski, J., Erban, A., Udvardi, M. K. & Kopka, J. Mining for robust transcriptional and metabolic responses to long-term salt stress: a case study on the model legume Lotus japonicus. Plant Cell and Environment 33, 468–480 (2010).

Steinfath, M., Strehmel, N., Peters, R., Schauer, N., Groth, D., Hummel, J., Steup, M., Selbig, J., Kopka, J., Geigenberger, P. & van Dongen, J. T. Discovering plant metabolic biomarkers for phenotype prediction using an untargeted approach. Plant Biotechnology Journal 8, 900–911 (2010).

Strassburg, K., Walther, D., Takahashi, H., Kanaya, S. & Kopka, J. Dynamic Transcriptional and Metabolic Responses in Yeast Adapting to Temperature Stress. Omics-a Journal of Integrative Biology 14, 249–259 (2010).

Strehmel, N., Praeger, U., Koenig, C., Fehrle, I., Erban, A., Geyer, M., Kopka, J. & van Dongen, J. T. Time course effects on primary metabolism of potato (Solanum tuberosum) tuber tissue after mechanical impact. Postharvest Biology and Technology 56, 109–116 (2010).