Publikationen von S. Klie
Alle Typen
Zeitschriftenartikel (21)
1.
Zeitschriftenartikel
Cookson, S. J., Yadav, U. P., Klie, S., Morcuende, R., Usadel, B., Lunn, J. E. & Stitt, M. Temporal kinetics of the transcriptional response to carbon depletion and sucrose readdition in Arabidopsis seedlings. Plant, Cell and Environment 39, 768–786 (2016).
2.
Zeitschriftenartikel
Ruprecht, C., , Tohge, T., , Klie, S., Fernie, A. R., Nikoloski, Z., & Mutwil, M. FamNet: A Framework to Identify Multiplied Modules Driving Pathway Expansion in Plants. Plant Physiology 170, 1878–1894 (2016).
3.
Zeitschriftenartikel
Klie, S., , , , , , , & Glucocorticoid (dexamethasone)-induced metabolome changes in healthy males suggest prediction of response and side effects. Scientific Reports 5, (2015).
, 4.
Zeitschriftenartikel
Klie, S., , , , , , , , , , Fernie, A. R., Nikoloski, Z., , & Decreased Nucleotide and Expression Diversity and Modified Coexpression Patterns Characterize Domestication in the Common Bean. The Plant Cell 26, 1901–1912 (2014).
, , , , , 5.
Zeitschriftenartikel
Klie, S., Persson, S. & An integrated genomic and metabolomic framework for cell wall biology in rice. BMC Genomics 15, (2014).
, , , , , , , , , 6.
Zeitschriftenartikel
Kleessen, S., Klie, S. & Nikoloski, Z. Concurrent Conditional Clustering of Multiple Networks: COCONETS. PLoS One 9, (2014).
7.
Zeitschriftenartikel
Klie, S., Nikoloski, Z. & Selbig, J. Biological Cluster Evaluation for Gene Function Prediction. Journal of Computational Biology 21, 428–445 (2014).
8.
Zeitschriftenartikel
Klie, S., , Tohge, T., , , , Fernie, A. R. & Nikoloski, Z. Conserved Changes in the Dynamics of Metabolic Processes during Fruit Development and Ripening across Species. Plant Physiology 164, 55–68 (2014).
9.
Zeitschriftenartikel
Rajasundaram, D., Selbig, J., Persson, S. & Klie, S. Co-ordination and divergence of cell-specific transcription and translation of genes in arabidopsis root cells. Annals of Botany 114, 1109–23 (2014).
10.
Zeitschriftenartikel
Kleessen, S., Klie, S. & Nikoloski, Z. Data Integration through Proximity-Based Networks Provides Biological Principles of Organization across Scales. The Plant Cell 25, 1917–1927 (2013).
11.
Zeitschriftenartikel
Omranian, N., Klie, S., Mueller-Roeber, B. & Nikoloski, Z. Network-Based Segmentation of Biological Multivariate Time Series. PLoS One 8, e62974 (2013).
12.
Zeitschriftenartikel
Hubberten, H.-M., Klie, S., Caldana, C., Degenkolbe, T., Willmitzer, L. & Hoefgen, R. An additional role of O-acetylserine as a sulphur status independent regulator during plant growth. Plant Journal 70, 666–677 (2012).
13.
Zeitschriftenartikel
Klie, S., Caldana, C. & Nikoloski, Z. Compromise of multiple time-resolved transcriptomics experiments identifies tightly regulated functions. Frontiers in Plant Science 3, 249 (2012).
14.
Zeitschriftenartikel
Klie, S. & Nikoloski, Z. The Choice between MapMan and Gene Ontology for Automated Gene Function Prediction in Plant Science. Frontiers in Genetics 3, 115 (2012).
15.
Zeitschriftenartikel
Caldana, C., Degenkolbe, T., Cuadros-Inostroza, A., Klie, S., Sulpice, R., Leisse, A., Steinhauser, D., Fernie, A. R., Willmitzer, L. & Hannah, M. A. High-density kinetic analysis of the metabolomic and transcriptomic response of Arabidopsis to eight environmental conditions. The Plant Journal 67, 869–884 (2011).
16.
Zeitschriftenartikel
Klie, S., , Krall, L., Giavalisco, P., , Willmitzer, L. & Steinhauser, D. Analysis of the compartmentalized metabolome – a validation of the non-aqueous fractionation technique. Frontiers in Plant Science 2, 55 (2011).
17.
Zeitschriftenartikel
Mutwil, M., Klie, S., Tohge, T., Giorgi, F. M., , , Fernie, A. R., Usadel, B., Nikoloski, Z. & Persson, S. PlaNet: Combined Sequence and Expression Comparisons across Plant Networks Derived from Seven Species. The Plant Cell 23, 895–910 (2011).
18.
Zeitschriftenartikel
Nikoloski, Z., Grimbs, S., Klie, S. & Selbig, J. Complexity of automated gene annotation. Biosystems 104, 1–8 (2011).
19.
Zeitschriftenartikel
Jozefczuk, S., Klie, S., Catchpole, G., Szymanski, J., Cuadros-Inostroza, A., Steinhauser, D., Selbig, J. & Willmitzer, L. Metabolomic and transcriptomic stress response of Escherichia coli. Molecular Systems Biology 6, 364 (2010).
20.
Zeitschriftenartikel
Klie, S., Nikoloski, Z. & Selbig, J. Biological Cluster Evaluation for Gene Function Prediction. Journal of Computational Biology 17, 1–18 (2010).