Archiv der bisher stattgefundenen Seminare

Raum: Lecture Hall

The cell snatchers - Understanding plant manipulation by geminiviruses

February 2024

Mobilization of endogenous transposable elements in plants for basic and applied research

December 2023

Nitrate signaling for plant growth and development: the ins and outs of NLP-transcription factors

November 2023

Towards understanding the role of the extreme ribosome heterogeneity of plants

October 2023

Differences in host resistance and susceptibility to infection modulate the rate of plant virus evolution

October 2023

Controlling transcription from within transcribed regions in flowering plants

September 2023

A Bioeconomy: What is it and why should I care?

March 2023

Epigenetic regulation of plant germline development

March 2023

Apoplastic modifications in plant reproductive development: The (w)hole story

November 2022

The evolution of plant reproduction: what have we missed so far?

November 2022

Epigenetic control of transposon activity and dosage in pollen and hybrid seeds

The Hypocotyl Endodermis: a model tissue for seedling plasticity

The journey of two Agronautes along the plant germline

Overlapping pathways of sugars and hormones in control of plant architecture

  • Datum: 22.07.2022
  • Uhrzeit: 14:00 - 15:30
  • Vortragende(r): Franziska Fichtner
  • ARC Centre for Plant Success in Nature and Agriculture & School of Biological Sciences, The University of Queensland, St Lucia, Australia
  • Ort: Central Building
  • Raum: Lecture Hall
  • Gastgeber: John Lunn

Philip Wigge - How do plants sense temperature?

November 2019

Robert Sablowski

May 2019

Angela Hay - Explosive seed dispersal

Tom Sharkey

October 2017

Staffan Persson - Plants and plumbing; A design guide to efficient water transportation

Abstract: The plant xylem is one of the most important evolutionary innovations for terrestrial life, as it allowed plants to adapt and growth to significant stature. The xylem cells are encased by thickened cell walls that reinforce them and that are typically organized in spiraling or reticulate patterns. These wall types are largely assembled from the polysaccharide cellulose, which is synthesized at the plasma membrane by large cellulose synthase (CesA) complexes. The CesAs move along linear tracks at the plasma membrane, which is likely due to the catalytic activity of the proteins. The direction of the CesA movement is thought to be steered by cortical microtubules via the protein Cellulose Synthase Interacting (CSI)1; however, this is not clarified for secondary wall synthesis. In addition, it is unclear how the microtubules are re-arranged to support patterns of the cell walls and how this transition affect cellulose synthesis. In this talk I will outline how microtubules re-arrange themselves to support the transition between primary and secondary wall cellulose synthesis. These results will provide a framework to understand how patterned secondary walls emerge. [mehr]
The unparalleled performance of Chlorella ohadii clearly indicated that we lack information on the photosynthetic machinery and what sets the upper growth limits. When grown under optimal laboratory or controlled outdoor conditions, this alga, recently isolated from one of the harshest environments (a biological desert sand crust), exhibits the fastest growth rates ever reported for an alga, division times shorter than 2 h were recorded. The cultures perform very high photosynthetic rates and reach high cell densities (1.3*109 cells/mL). Unlike other photosynthetic organisms, C. ohadii productivity is unaffected by irradiances twice full sun light; and the level of protein D1, encoded by a single gene, is hardly affected. Rather than succumbing to photodamage C. ohadii undergoes major structural and compositional changes (including 2-3 fold increase of the lipid and carbohydrate contents and a large rise in the abundance of the thylakoids), emphasizing the importance of its unique PSII functioning as well as highly efficient reductant utilization downstream of the photosynthetic reaction centers. Comparing its genome sequence with those of other algae shed light on the unique genetic potential of C. ohadii, its growth and photosynthetic performance and its ability to withstand salinity and desiccation in its natural environment. RNA-Seq revealed regulation of genes networks under changing light and trophic regimes, and provided novel insights on the mechanism underlying its exceptional photodamage resistance. In spite of its enormous growth and photosynthetic capabilities, C. ohadii is found in low abundance in its natural environment and was originally isolated as a contamination in a decaying culture of the filamentous cyanobacterium Leptolyngbya ohadii, an important primary producer in the BSCs. Using a tailor-made chamber simulating crust conditions, we show that ability of C. ohadii to revive after desiccation depends on close contact with L. ohadii, through a unique and novel mode of interspecies association. In view of the unparalleled growth and photosynthetic performance, C. ohadii may be used to clarify the processes that rate-limit growth and productivity of photosynthetic organisms. The biotechnological potential and uses are self-evident. [mehr]
“Career building: Where do you want to go and how will you get there?” Once upon a time, it was common for young scientists to be offered faculty positions immediately after completing their PhDs. Now the world is a different place, and statistically speaking most of you will not become a professor, although some of you certainly will. At this point in your career you should be thinking carefully about what career options are interesting and available to you, and how to position yourself to be qualified for those jobs. How do you decide what career would be best for you? How do you balance the demands of your research with skill building? How do you secure interviews for the hard-to-find professorships? I’ll share my knowledge of career building resources and strategies and help you to expand your career horizons. [mehr]

Mary Wiliams - Publishing and reviewing papers

What do journal editors look for in a submission? Why is the cover letter so important? How does one respond to a negative review? Using The Plant Cell as an example, I will provide an overview of the editorial decision process and describe what happens after your paper is submitted. Guidelines for how to respond to peer review as well as how to be an effective peer reviewer will also be discussed, as will models of pre-publication peer review (e.g., BiorXiv) and post-publication peer review. [mehr]
Remarkable progress has been made recently in our capacity to ascribe functions to plant genes, and to measure and interpret large numbers of transcripts, proteins and metabolites. As a result, we have a detailed understanding of many plant processes that were largely unknown two decades ago. Generally speaking, this understanding has been acquired through study of Arabidopsis plants grown under closely defined, rather constant conditions that are very different from those in which plants evolved, and in which they normally grow. We now need to face the challenge of understanding plants in the real world. I will use examples from my own experience in plant carbohydrate metabolism to illustrate the complexity and magnitude of this challenge. How do plants cope with the fundamental problem of alternating day and night, and with the continuous fluctuations in temperature, light and availability of water and nutrients that occur in natural and farmed environments? To what extent can we extrapolate from Arabidopsis to – for example – grasses, and trees? Will the answers to these questions change as the Earth’s atmosphere is changed by human activity? Can we as plant scientists agree a set of priorities, and collaborate together to achieve them sufficiently rapidly to provide the sustainable sources of food and raw materials that will be required by a planet with nine billion people? [mehr]

Origin and Function of the Autophagosome Membrane

We studied the biogenesis of the autophagosome membrane by examining an early covalent event in autophagy, the lipidation of a cytosolic protein, LC3-I to form LC3-II. Using membranes from a cultured cell line deficient in lipidation, we demonstrated that the ERGIC was a major site for lipidation of LC3. Starvation induces the activation of a PI3 kinase to produce PI3P, which is required for the formation of LC3-II. We find that starved cells transfer a pool of COPII proteins from the ER to the ERGIC from which novel COPII vesicles bud that may be the immediate precursor of the phagophore membrane. Inflammation induces the abundant secretion of IL-1 β from macrophages and neutrophils by a process that appears to be independent of the normal secretory pathway. Co-expression of IL-1β and caspase 1 reconstituted the stress-induced secretion of mature IL-1β in HEK293 cells under conditions where cell lysis was minimal. Cells deficient in the lipidation of a cytosolic protein, LC-3, required for autophagy, accumulate IL-1β in the cytoplasm. Using cell fractionation experiments we found that IL-1β precursor and mature forms co-isolated with phagophore membranes marked by their content of lipidated LC-3. Using cells depleted of ATG2, a protein required for phagophore closure to produce a double-membrane mature authophagosome, we found that mature IL-1β, but not the precursor or control proteins were resistant to proteinase k, suggesting that IL-1β enters the lumen of the phagophore membrane rather than being engulfed into the cyoplasmic interior of the organelle. We have identified a targeting signal and a role for hsp90 in a translocation event that localizes IL-1β to the interior of the phagophore envelope. Fusion of the autophagosome with the plasma membrane would then result in the release of soluble IL-1β to the extracellular space. [mehr]

Regulation of Amino Acid Metabolism in Tomato Seeds

Crop plants represent the primary source of amino acids (AAs) for humans and livestock. Metabolite profiling and correlation-based network analysis (CNA) of seeds of a tomato Introgression Line mapping population revealed a clique of proteinogenic amino acids (Gly, Leu, Pro, Ser, Thr, and Val) concertedly changing at the metabolite level and sharing a set of closely related metabolic genes. QTL analysis revealed co-localization of the six amino acids on chromosome 2, 4 and 10. In silico analysis was used to quantify the effect of the clique on seminal structural network properties, highlighting its centrality in the network. Sequence analysis identified a unique set of 10 genes on chromosome 2 only, which were associated with amino acid metabolism and specifically the metabolism of Ser-Gly and their conversion into branched chain amino acids. Metabolite profiling of a set of sublines, with introgressions in chromosome 2, identified a significant change in the abundance of the six amino acids in comparison to M82. Expression analysis of candidate genes affecting Ser metabolism matched the observation from the metabolite data, suggesting a tightly coordinated regulation of the level of these amino acids. [mehr]

50 Years of Plant Science (1980-2030): Evolution of a research field

The evolution of land plants fundamentally changed the earth’s atmosphere and paved the way for terrestrial life as we know it. Despite a pivotal role in both initiating and sustaining animal life, plants received relatively scant attention from biologists for decades. Why? What, if anything, changed? I will discuss my own research trajectory from human genetics to plant developmental genetics, and provide insight into the way in which the research field has changed over the last 35 years. What have we learnt about plant biology, what is left to learn, and what challenges lie ahead? [mehr]

Molecular modelling approaches to identify potential targets for insect control

Olfaction is perhaps the most important singular component of insect behaviour. It is, therefore, a legitimate biotechnological target for the control of agricultural insect pests and/or vectors for the transmission of human diseases resulting in an annual death toll of millions. Odorant binding proteins (OBPs) are an ubiquitous component of the insect olfactory system. They are found at very high concentrations (~10mM) in the insect antennae are thought to solubilise odourant molecules, transport and deliver them to olfactory receptors. Although they are believed to play an important role in olfactory receptor activation, the precise mechanism by means of which they do so remain highly speculative. Little is known about the interaction of OBPs with specific receptors and the mode of delivery of odorant molecules to the receptor. Computational studies can provide valuable insights enabling the prediction of binding affinities and selectivities of OBPs to pheromones and other semiochemicals, as well as identify “hot spots” for ligand binding for structure-based design of compounds with a potential to disrupt olfactory behaviour. [mehr]
Remarkable progress has been made recently in our capacity to ascribe functions to plant genes, and to measure and interpret large numbers of transcripts, proteins and metabolites. As a result, we have a detailed understanding of many plant processes that were largely unknown two decades ago. Generally speaking, this understanding has been acquired through study of Arabidopsis plants grown under closely defined, rather constant conditions that are very different from those in which plants evolved, and in which they normally grow. We now need to face the challenge of understanding plants in the real world. I will use examples from my own experience in plant carbohydrate metabolism to illustrate the complexity and magnitude of this challenge. How do plants cope with the fundamental problem of alternating day and night, and with the continuous fluctuations in temperature, light and availability of water and nutrients that occur in natural and farmed environments? To what extent can we extrapolate from Arabidopsis to – for example – grasses, and trees? Will the answers to these questions change as the Earth’s atmosphere is changed by human activity? Can we as plant scientists agree a set of priorities, and collaborate together to achieve them sufficiently rapidly to provide the sustainable sources of food and raw materials that will be required by a planet with nine billion people? [mehr]

Genetic approaches to develop salt tolerant germplasm

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