Publikationen von Dirk Walther
Zeitschriftenartikel (85)
1.
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4 (2), lqac027 (2022)
Graph-based models of the Oenothera mitochondrial genome capture the enormous complexity of higher plant mitochondrial DNA organization. NAR: genomics and bioinformatics 2.
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13, 849329 (2022)
PRI: Re-analysis of a public mass cytometry dataset reveals patterns of effective tumor treatments. Frontiers in immunology 3.
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2 (1), vbac001 (2022)
Biclique extension as an effective approach to identify missing links in metabolic compound-protein interaction networks. Bioinformatics advances 4.
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22, 605 (2021)
COSNet(i): ComplexOme-Structural Network Interpreter used to study spatial enrichment in metazoan ribosomes. BMC Bioinformatics 5.
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Tyr-Asp inhibition of glyceraldehyde 3-phosphate dehydrogenase affects plant redox metabolism. EMBO Journal, e106800 (2021)
6.
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22 (1), 390 (2021)
Identification of cis-regulatory motifs in first introns and the prediction of intron-mediated enhancement of gene expression in Arabidopsis thaliana. BMC Genomics 7.
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19 (3), S. 477 - 489 (2021)
Deciphering Transcriptional Regulators of Banana Fruit Ripening by Regulatory Network Analysis. Plant Biotechnology Journal 8.
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22 (11), 6160 (2021)
Spatially enriched paralog rearrangements argue functionally diverse ribosomes arise during cold acclimation in arabidopsis. International Journal of Molecular Sciences 9.
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22 (11), 6123 (2021)
Genome-wide approach to identify quantitative trait loci for drought tolerance in tetraploid potato (Solanum tuberosum L.). International Journal of Molecular Sciences 10.
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48 (20), S. 11347 - 11369 (2020)
Determinants of correlated expression of transcription factors and their target genes. Nucleic Acids Research 11.
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10 (1), 7202 (2020)
Polymorphisms in miRNA binding sites involved in metabolic diseases in mice and humans. Scientific Reports 12.
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11, 1071 (2020)
Can Metabolite- and Transcript-Based Selection for Drought Tolerance in Solanum tuberosum Replace Selection on Yield in Arid Environments? Frontiers in Plant Science 13.
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9 (3), 319 (2020)
Growth under fluctuating light reveals large trait variation in a panel of arabidopsis accessions. Plants 14.
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21 (8), 2794 (2020)
Similar yet different–structural and functional diversity among arabidopsis thaliana LEA_4 proteins. International Journal of Molecular Sciences 15.
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77, S. 705 - 718 (2020)
A novel seed plants gene regulates oxidative stress tolerance in Arabidopsis thaliana. Cellular and Molecular Life Sciences 16.
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43 (9), S. 2066 - 2079 (2020)
Metabolomic markers and physiological adaptations for high phosphate utilization efficiency in rice. Plant, Cell and Environment 17.
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180 (1), S. 654 - 681 (2019)
Highly Resolved Systems Biology to Dissect the Etioplast-to-Chloroplast Transition in Tobacco Leaves. Plant Physiology 18.
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9 (6), 305 (2019)
Effect of Senescence Phenotypes and Nitrate Availability on Wheat Leaf Metabolome during Grain Filling. Agronomy 19.
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116 (12), S. 5665 - 5674 (2019)
Chloroplast competition is controlled by lipid biosynthesis in evening primroses. Proceedings of the National Academy of Sciences of the United States of America 20.
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5 (5), S. 525 - 538 (2019)
Control of retrograde signalling by protein import and cytosolic folding stress. Nature Plants 21.
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176 (3), S. 2251 - 2276 (2018)
Plant Temperature Acclimation and Growth Rely on Cytosolic Ribosome Biogenesis Factor Homologs. Plant Physiology 22.
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46 (16), S. 8114 - 8132 (2018)
A genome-wide scan for correlated mutations detects macromolecular and chromatin interactions in Arabidopsis thaliana. Nucleic Acids Research 23.
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16 (4), S. 939 - 950 (2018)
Metabolite and transcript markers for the prediction of potato drought tolerance. Plant Biotechnology Journal 24.
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10, 51 (2018)
Promising Metabolite Profiles in the Plasma and CSF of Early Clinical Parkinson's Disease. Frontiers in Aging Neuroscience 25.
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12, 226 (2018)
Metabolomic Profiles for Primary Progressive Multiple Sclerosis Stratification and Disease Course Monitoring. Frontiers in Human Neuroscience 26.
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8, 2048 (2017)
Characterization of the Wheat Leaf Metabolome during Grain Filling and under Varied N-Supply. Frontiers in Plant Science 27.
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85 (1), S. 78 - 92 (2017)
Towards understanding the crosstalk between protein post-translational modifications: Homo- and heterotypic PTM pair distances on protein surfaces are not random. Proteins: Structure, Function, and Bioinformatics 28.
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91 (2), S. 251 - 262 (2017)
Chlorosis caused by two recessively interacting genes reveals a role of RNA helicase in hybrid breakdown in Arabidopsis thaliana. The Plant Journal 29.
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8, 1831 (2017)
Metabolic Pathway Assignment of Plant Genes based on Phylogenetic Profiling-A Feasibility Study. Frontiers in Plant Science 30.
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84 (5), S. 565 - 579 (2016)
Spatial proximity statistics suggest a regulatory role of protein phosphorylation on compound binding. Proteins-Structure Function and Bioinformatics 31.
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2 (4), 16040 (2016)
Mobile RNAs convey the message. Nature Plants 32.
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The Identification of Cis-Regulatory Sequence Motifs in Gene Promoters Based on SNP Information. PLANT SYNTHETIC PROMOTERS: METHODS AND PROTOCOLS, S. 31 - 47 (2016)
33.
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17, 185 (2016)
The orientation of transcription factor binding site motifs in gene promoter regions: does it matter? BMC Genomics 34.
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39 (11), S. 2370 - 2389 (2016)
The drought response of potato reference cultivars with contrasting tolerance. Plant Cell Environment 35.
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28 (6), S. 1237 - 1249 (2016)
tRNA-Related Sequences Trigger Systemic mRNA Transport in Plants. Plant Cell 36.
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11 (6), S. 1587 - 1597 (2015)
COordination of Standards in MetabOlomicS (COSMOS): facilitating integrated metabolomics data access. Metabolomics 37.
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1, 15025 (2015)
Endogenous Arabidopsis messenger RNAs transported to distant tissues. Nature Plants 38.
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11 (2), e1004049 (2015)
The Roles of Post-translational Modifications in the Context of Protein Interaction Networks. PLoS Computational Biology 39.
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1306, S. 177 - 194 (2015)
Computational phosphorylation network reconstruction: methods and resources. Methods in Molecular Biology 40.
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2, 51 (2015)
Physicochemical characteristics of structurally determined metabolite-protein and drug-protein binding events with respect to binding specificity. Frontiers in molecular biosciences 41.
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15, 137 (2015)
Substantial reprogramming of the Eutrema salsugineum (Thellungiella salsuginea) transcriptome in response to UV and silver nitrate challenge. BMC Plant Biology 42.
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42 (7), S. 655 - 667 (2015)
Assessment of drought tolerance and its potential yield penalty in potato. Functional Plant Biology 43.
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10 (3), S. e0120533 - e0120533 (2015)
Multiple RNA Processing Defects and Impaired Chloroplast Function in Plants Deficient in the Organellar Protein-Only RNase P Enzyme. PLoS One 44.
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164 (1), S. 181 - 200 (2014)
Characterization and Identification of cis-Regulatory Elements in Arabidopsis Based on Single-Nucleotide Polymorphism Information. Plant Physiology 45.
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26 (6), S. 2367 - 2389 (2014)
Meta-Analysis of Arabidopsis thaliana Phospho-Proteomics Data Reveals Compartmentalization of Phosphorylation Motifs. Plant Cell 46.
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65 (4), S. 1051 - 1068 (2014)
The sucrose–trehalose 6-phosphate (Tre6P) nexus: specificity and mechanisms of sucrose signalling by Tre6P. Journal of Experimental Botany 47.
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4, 540 (2013)
Reconstruction and analysis of nutrient-induced phosphorylation networks in Arabidopsis thaliana. Frontiers in Plant Science 48.
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3 (1), S. 1 - 23 (2013)
The Metabolic Interplay between Plants and Phytopathogens. Metabolites 49.
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39 (10-11), S. 948 - 957 (2012)
Data management pipeline for plant phenotyping in a multisite project. Functional Plant Biology 50.
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158 (4), S. 1534 - 1541 (2012)
Matapax: An Online High-Throughput Genome-Wide Association Study Pipeline. Plant Physiology