Publikationen von D. Walther

Zeitschriftenartikel (89)

1.
Zeitschriftenartikel
Murik, O.; Geffen, O.; Shotland, Y.; Fernandez-Pozo, N.; Ullrich, K. K.; Walther, D.; Rensing, S. A.; Treves, H.: Genomic imprints of unparalleled growth. New Phytologist 241 (3), S. 1144 - 1160 (2023)
2.
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Back, G.; Walther, D.: Predictions of DNA mechanical properties at a genomic scale reveal potentially new functional roles of DNA flexibility. NAR: genomics and bioinformatics 5 (4), lqad097 (2023)
3.
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Giese, J.; Eirich, J.; Walther, D.; Zhang, Y.; Lassowskat, I.; Fernie, A. R.; Elsässer, M.; Maurino, V. G.; Schwarzländer, M.; Finkemeier, I.: The interplay of post-translational protein modifications in Arabidopsis leaves during photosynthesis induction. The Plant Journal 116 (4), S. 1172 - 1193 (2023)
4.
Zeitschriftenartikel
Weiszmann, J.; Walther, D.; Clauw, P.; Back, G.; Gunis, J.; Reichardt, I.; Koemeda, S.; Jez, J.; Nordborg, M.; Schwarzerova, J. et al.; Pierides, I.; Nägele, T.; Weckwerth, W.: Metabolome plasticity in 241 Arabidopsis thaliana accessions reveals evolutionary cold adaptation processes. Plant Physiology 193 (2), S. 980 - 1000 (2023)
5.
Zeitschriftenartikel
Qiu, Y.; Li, Z.; Walther, D.; Köhler, C.: Updated phylogeny and protein structure predictions revise the hypothesis on the origin of MADS-box transcription factors in land plants. Molecular Biology and Evolution 40 (9), msad194 (2023)
6.
Zeitschriftenartikel
Loiacono, F.V.; Walther, D.; Seeger, S.; Thiele, W.; Gerlach, I.; Karcher, D.; Schöttler, M. A.; Zoschke, R.; Bock, R.: Emergence of novel RNA editing sites by changes in the binding affinity of a conserved PPR protein. Molecular Biology and Evolution 39 (12), msac222 (2022)
7.
Zeitschriftenartikel
Chen, L.; Zhao, H.; Chen, Y.; Jiang, F.; Zhou, F.; Liu, Q.; Fan, Y.; Liu, T.; Tu, W.; Walther, D. et al.; Song, B.: Comparative transcriptomics analysis reveals a calcineurin B-like gene to positively regulate constitutive and acclimated freezing tolerance in potato. Plant, Cell and Environment 45 (11), S. 3305 - 3321 (2022)
8.
Zeitschriftenartikel
Fischer, A.; Dotzek, J.; Walther, D.; Greiner, S.: Graph-based models of the Oenothera mitochondrial genome capture the enormous complexity of higher plant mitochondrial DNA organization. NAR: genomics and bioinformatics 4 (2), lqac027 (2022)
9.
Zeitschriftenartikel
Hoang, Y.; Gryzik, S.; Hoppe, I.; Rybak, A.; Schädlich, M.; Kadner, I.; Walther, D.; Vera, J.; Radbruch, A.; Groth, D. et al.; Baumgart, S.; Baumgrass, R.: PRI: Re-analysis of a public mass cytometry dataset reveals patterns of effective tumor treatments. Frontiers in immunology 13, 849329 (2022)
10.
Zeitschriftenartikel
Thieme, S.; Walther, D.: Biclique extension as an effective approach to identify missing links in metabolic compound-protein interaction networks. Bioinformatics advances 2 (1), vbac001 (2022)
11.
Zeitschriftenartikel
Martinez-Seidel, F.; Hsieh, Y.-C.; Walther, D.; Kopka, J.; Firmino, A.: COSNet(i): ComplexOme-Structural Network Interpreter used to study spatial enrichment in metazoan ribosomes. BMC Bioinformatics 22, 605 (2021)
12.
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Moreno, J.C.; Rojas, B.E.; Vicente, R.; Gorka, M.; Matz, T.; Kosmacz, M.; Peralta-Ariza, J.S.; Zhang, Y.; Alseekh, S.; Childs, D. et al.; Luzarowski, M.; Nikoloski, Z.; Zarivach, R.; Walther, D.; Hartman, M.D.; Figueroa, C.M.; Iglesias, A.A.; Fernie, A. R.; Skirycz, A.: Tyr-Asp inhibition of glyceraldehyde 3-phosphate dehydrogenase affects plant redox metabolism. EMBO Journal 40 (15), e106800 (2021)
13.
Zeitschriftenartikel
Back, G.; Walther, D.: Identification of cis-regulatory motifs in first introns and the prediction of intron-mediated enhancement of gene expression in Arabidopsis thaliana. BMC Genomics 22 (1), 390 (2021)
14.
Zeitschriftenartikel
Kuang, J.-F.; Wu, C.-J.; Guo, Y.-F.; Walther, D.; Shan, W.; Chen, J.-Y.; Chen, L.; Lu, W.-J.: Deciphering Transcriptional Regulators of Banana Fruit Ripening by Regulatory Network Analysis. Plant Biotechnology Journal 19 (3), S. 477 - 489 (2021)
15.
Zeitschriftenartikel
Martinez-Seidel, F.; Beine-Golovchuk, O.; Hsieh, Y.-C.; El Eshraky, K.; Gorka, M.; Cheong, B.-E.; Jimenez‐posada, E.V.; Walther, D.; Skirycz, A.; Roessner, U. et al.; Kopka, J.; Firmino, A.: Spatially enriched paralog rearrangements argue functionally diverse ribosomes arise during cold acclimation in arabidopsis. International Journal of Molecular Sciences 22 (11), 6160 (2021)
16.
Zeitschriftenartikel
Schumacher, C.; Thümecke, S.; Schilling, F.; Koehl, K. I.; Kopka, J.; Sprenger, H.; Hincha, D. K.; Walther, D.; Seddig, S.; Peters, R. et al.; Zuther, E.; Haas, M.; Horn, R.: Genome-wide approach to identify quantitative trait loci for drought tolerance in tetraploid potato (Solanum tuberosum L.). International Journal of Molecular Sciences 22 (11), 6123 (2021)
17.
Zeitschriftenartikel
Zaborowski, A. B.; Walther, D.: Determinants of correlated expression of transcription factors and their target genes. Nucleic Acids Research 48 (20), S. 11347 - 11369 (2020)
18.
Zeitschriftenartikel
Gottmann, P.; Ouni, M.; Zellner, L.; Jähnert, M.; Rittig, K.; Walther, D.; Schürmann, A.: Polymorphisms in miRNA binding sites involved in metabolic diseases in mice and humans. Scientific Reports 10 (1), 7202 (2020)
19.
Zeitschriftenartikel
Haas, M.; Sprenger, H.; Zuther, E.; Peters, R.; Seddig, S.; Walther, D.; Kopka, J.; Hincha, D. K.; Koehl, K. I.: Can Metabolite- and Transcript-Based Selection for Drought Tolerance in Solanum tuberosum Replace Selection on Yield in Arid Environments? Frontiers in Plant Science 11, 1071 (2020)
20.
Zeitschriftenartikel
Kaiser, E.; Walther, D.; Armbruster, U.: Growth under fluctuating light reveals large trait variation in a panel of arabidopsis accessions. Plants 9 (3), 319 (2020)
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