Max-Planck-Institut für Molekulare Pflanzenphysiologie

Publikationen der Gruppe

Zeitschriftenartikel (995)

1.

Zeitschriftenartikel

Naake, T.; D'Auria, J.; Fernie, A. R.; Scossa, F.: Phylogenomic and synteny analysis of BAHD and SCP/SCPL gene families reveal their evolutionary histories in plant specialized metabolism. Philosophical Transactions of the Royal Society of London, Series B: Biological Sciences 379 (1914), 20230349 (2024)

MPG.PuRe

2.

Zeitschriftenartikel

Yoshida, T.; Mergner, J.; Yang, Z.; Liu, J.; Kuster, B.; Fernie, A. R.; Grill, E.: Integrating multi-omics data reveals energy and stress signaling activated by abscisic acid in Arabidopsis. The Plant Journal 119 (2), S. 1112 - 1133 (2024)

MPG.PuRe

3.

Zeitschriftenartikel

Naake, T.; Zhu, F.; Alseekh, S.; Scossa, F.; de Souza, L. P.; Borghi, M.; Brotman, Y.; Mori, T.; Nakabayashi, R.; Tohge, T. et al.; Fernie, A. R.: Genome-wide association studies identify loci controlling specialized seed metabolites in Arabidopsis. Plant Physiology 194 (3), S. 1705 - 1721 (2024)

MPG.PuRe

4.

Zeitschriftenartikel

Dziubek, D.; Poeker, L.; Siemiatkowska, B.; Graf, A.; Marino, G.; Alseekh, S.; Arrivault, S.; Fernie, A. R.; Armbruster, U.; Geigenberger, P.: NTRC and thioredoxins m1/m2 underpin the light acclimation of plants on proteome and metabolome levels. Plant Physiology 194, S. 982 - 1005 (2024)

MPG.PuRe

5.

Zeitschriftenartikel

Rosa-Téllez, S.; Alcántara-Enguídanos, A.; Martinez-Seidel, F.; Casatejada-Anchel, R.; Saeheng, S.; Bailes, C. L.; Erban, A.; Medeiros, D.B.; Alepúz, P.; Matus, J. T. et al.; Kopka, J.; Muñoz-Bertomeu, J.; Krueger, S.; Roje, S.; Fernie, A. R.; Ros, R.: The serine-glycine-one carbon metabolic network orchestrates changes in nitrogen and sulfur metabolism and shapes plant development. The Plant Cell 36 (2), koad256, S. 404 - 426 (2024)

MPG.PuRe

6.

Zeitschriftenartikel

Carreno-Quintero, N.; Tohge, T.; Van Acker, R.; McKee, L.S.; Zhou, Q.; Bolze, A.; Xing, X.; Özparpucu, M.; Rüggeberg, M.; Piofczyk, T. et al.; Koram, Y.; Bulone, V.; Boerjan, W.; Fernie, A. R.; Fraser, P.D.: Non-targeted discovery of high-value bio-products in Nicotiana glauca L: a potential renewable plant feedstock. Bioresources and Bioprocessing 11, 12 (2024)

MPG.PuRe

7.

Zeitschriftenartikel

Zhang, Y.; Wiese, L.; Fang, H.; Alseekh, S.; de Souza, L. P.; Scossa, F.; Molloy, J.; Christmann, M.; Fernie, A. R.: Synthetic biology identifies the minimal gene set required for Paclitaxel biosynthesis in a plant chassis. Molecular Plant 16 (12), S. 1951 - 1961 (2023)

MPG.PuRe

8.

Zeitschriftenartikel

Barros, J.A.S.; Cavalcanti, J.H.F.; Pimentel, K.G.; Magen, S.; Soroka, Y.; Weiss, S.; Medeiros, D.B.; Nunes-Nesi, A.; Fernie, A. R.; Avin-Wittenberg, T. et al.; Araújo, W.L.: The interplay between autophagy and chloroplast vesiculation pathways under dark-induced senescence. Plant, Cell and Environment 46 (12), S. 3721 - 3736 (2023)

MPG.PuRe

9.

Zeitschriftenartikel

Vicente, M. H.; MacLeod, K.; Zhu, F.; Rafael, D. D.; Figueira, A.; Fernie, A. R.; Mohareb, F.; Kevei, Z.; Thompson, A. J.; Zsögön, A. et al.; Peres, L. E. P.: The ORGAN SIZE (ORG) locus modulates both vegetative and reproductive gigantism in domesticated tomato. Annals of Botany 132 (7), S. 1233 - 1248 (2023)

MPG.PuRe

10.

Zeitschriftenartikel

von Bismarck, T.; Wendering, P.; de Souza, L. P.; Ruß, J.; Strandberg, L.; Heyneke, E.; Walker, B. J.; Schöttler, M. A.; Fernie, A. R.; Nikoloski, Z. et al.; Armbruster, U.: Growth in fluctuating light buffers plants against photorespiratory perturbations. Nature Communications 14 (1), 7052 (2023)

MPG.PuRe

11.

Zeitschriftenartikel

Zemach, I.; Alseekh, S.; Tadmor-Levi, R.; Fisher, J.; Torgeman, S.; Trigerman, S.; Nauen, J.; Hayut, S. F.; Mann, V.; Rochsar, E. et al.; Finkers, R.; Wendenburg, R.; Osorio, S.; Bergmann, S.; Lunn, J. E.; Semel, Y.; Hirschberg, J.; Fernie, A. R.; Zamir, D.: Multi-year field trials provide a massive repository of trait data on a highly diverse population of tomato and uncover novel determinants of tomato productivity. The Plant Journal 116 (4), S. 1136 - 1151 (2023)

MPG.PuRe

12.

Zeitschriftenartikel

Lamm, C. E.; Rabbi, I. Y.; Medeiros, D.B.; Rosado-Souza, L.; Pommerrenig, B.; Dahmani, I.; Rüscher, D.; Hofmann, J.; van Doorn; M., A. et al.; Schlereth, A.; Neuhaus, H. E.; Fernie, A. R.; Sonnewald, U.; Zierer, W.: Efficient sugar utilization and transition from oxidative to substrate-level phosphorylation in high starch storage roots of African cassava genotypes. The Plant Journal 116 (1), S. 38 - 57 (2023)

MPG.PuRe

13.

Zeitschriftenartikel

Pereira-Lima, Í.A.; Batista-Silva, W.; Siqueira, J.A.; Silva, M.F.; Medeiros, D.B.; Cavalcanti, J.H.; Gonçalves, J.F.D.C.; Ribeiro, D.M.; Fernie, A. R.; Nunes-Nesi, A. et al.; Araújo, W.L.: Differential Aluminum tolerance in Arabidopsis thaliana ecotypes is seemingly related to metabolite changes. Environmental and Experimental Botany 214, 105472 (2023)

MPG.PuRe

14.

Zeitschriftenartikel

Younis, I.Y.; Mohsen, E.; Ibrahim, R.M.; Fernie, A. R.; Alseekh, S.; Salem, M.A.: Non-targeted metabolomics and chemometrics for saffron (Crocus sativus L.) authentication and adulteration detection in relation to its anticholinesterase activity. Food Chemistry Advances 2, 100217 (2023)

MPG.PuRe

15.

Zeitschriftenartikel

Garcia, F. H. S.; Domingues Júnior, A.P.; Lima Nogueira, M.; de Paula, S.; Ferreira, J.; Lavres, J.; Martins, S. J.; Fernie, A. R.; Kluge, R. A.: Impact of Leifsonia xyli subsp. xyli titer on nutritional status, and metabolism of sugar cane. Plant and Soil 493, S. 341 - 354 (2023)

MPG.PuRe

16.

Zeitschriftenartikel

Jing, Y.; Watanabe, M.; Aarabi, F.; Fernie, A. R.; Borghi, M.; Tohge, T.: Cross-Species Metabolomic Analyses In The Brassicaceae Reveals Common Responses To Ultraviolet-B Exposure. Plant and Cell Physiology 64 (12), S. 1523 - 1533 (2023)

MPG.PuRe

17.

Zeitschriftenartikel

Lima, V.F.; Freire, F.B.S.; Cândido-Sobrinho, S.A.; Porto, N.P.; Medeiros, D.B.; Erban, A.; Kopka, J.; Schwarzländer, M.; Fernie, A. R.; Daloso, D.M.: Unveiling the dark side of guard cell metabolism. Plant Physiology and Biochemistry 201, 107862 (2023)

MPG.PuRe

18.

Zeitschriftenartikel

Chmielewski, M. W.; Naya, S.; Borghi, M.; Cortese, J.; Fernie, A. R.; Swartz, M. T.; Zografou, K.; Sewall, B. J.; Spigler, R. B.: Phenology and foraging bias contribute to sex-specific foraging patterns in the rare declining butterfly Argynnis idalia idalia. Ecology and Evolution 13 (7), e10287 (2023)

MPG.PuRe

19.

Zeitschriftenartikel

Aarabi, F.; Salem, M. A.; Arrivault, S.; Bulut, M.; Schöttler, M. A.; Giavalisco, P.; Fernie, A. R.; Hoefgen, R.: The regulation of sulfolipids under sulfur starvation. Plant Molecular Biology 112, S. 195 - 198 (2023)

MPG.PuRe

20.

Zeitschriftenartikel

Cerqueira, J. V. A.; de Andrade; T., M.; Rafael, D. D.; Zhu, F.; Martins, S. V. C.; Nunes-Nesi, A.; Benedito, V.; Fernie, A. R.; Zsögön, A.: Anthocyanins and reactive oxygen species: a team of rivals regulating plant development? Plant Molecular Biology 112, S. 213 - 223 (2023)

MPG.PuRe

21.

Zeitschriftenartikel

Moghe, G.; Kruse, L. H.; Petersen, M.; Scossa, F.; Fernie, A. R.; Gaquerel, E.; D'Auria, J. C.: BAHD Company: The Ever-Expanding Roles of the BAHD Acyltransferase Gene Family in Plants. Annual Review of Plant Biology 74, S. 165 - 194 (2023)

MPG.PuRe

22.

Zeitschriftenartikel

Neri-Silva, R.; Monteiro-Batista, R. D.; Fonseca-Pereira, P. D.; Nunes, M. D.; Viana-Silva, A. L.; Palhares Ribeiro, T.; Pérez-Díaz, J. L.; Medeiros, D.B.; Araújo, W. L.; Fernie, A. R. et al.; Nunes-Nesi, A.: On the Significance of the ADNT1 Carrier in Arabidopsis thaliana under Waterlogging Conditions. Biomolecules 13 (5), 731 (2023)

MPG.PuRe

23.

Zeitschriftenartikel

Gago, J.; Nadal, M.; Clemente-Moreno, M. J.; Figueroa, C. M.; Medeiros, D.B.; Cubo-Ribas, N.; Cavieres, L. A.; Gulías, J.; Fernie, A. R.; Flexas, J. et al.; Bravo, L. A.: Nutrient availability regulates Deschampsia antarctica photosynthetic and stress tolerance performance in Antarctica. Journal of Experimental Botany 74, S. 2620 - 2637 (2023)

MPG.PuRe

24.

Zeitschriftenartikel

Hong, J.; Rosental, L.; Xu, Y.; Xu, D.; Orf, I.; Wang, W.; Hu, Z.; Su, S.; Bai, S.; Ashraf, M. et al.; Hu, C.; Zhang, C.; Li, Z.; Xu, J.; Liu, Q.; Zhang, H.; Zhang, F.; Luo, Z.; Chen, M.; Chen, X.; Betts, N.; Fernie, A. R.; Liang, W.; Chen, G.; Brotman, Y.; Zhang, D.; Shi, J.: Genetic architecture of seed glycerolipids in Asian cultivated rice. Plant, Cell and Environment 46 (4 - Special Issue: Rice 2050), S. 1278 - 1294 (2023)

MPG.PuRe

25.

Zeitschriftenartikel

Aghajanzadeh, T.A.; Watanabe, M.; Tohge, T.; Hawkesford, M.J.; Fernie, A. R.; Hoefgen, R.; Elzenga, J.T.M.; De Kok, L.J.: Necrotrophic fungal infection affects indolic glucosinolate metabolism in Brassica rapa. Acta Physiologiae Plantarum 45 (5), 64 (2023)

MPG.PuRe

26.

Zeitschriftenartikel

Zhu, F.; Sun, Y.; Jadhav, S. S.; Cheng, Y.; Alseekh, S.; Fernie, A. R.: The Plant Metabolic Changes and the Physiological and Signaling Functions in the Responses to Abiotic Stress. Methods in Molecular Biology 2642, S. 129 - 150 (2023)

MPG.PuRe

27.

Zeitschriftenartikel

Porto, N.P.; Bret, R.S.C.; Souza, P.V.L.; Cândido-Sobrinho, S.A.; Medeiros, D.B.; Fernie, A. R.; Daloso, D. M.: Thioredoxins regulate the metabolic fluxes throughout the tricarboxylic acid cycle and associated pathways in a light-independent manner. Plant Physiology and Biochemistry 193, S. 36 - 49 (2022)

MPG.PuRe

28.

Zeitschriftenartikel

Pinto, S. S.; Martins, A. O.; Fontes, L. F. P.; Oliveira, F. S.; Almeida, I. C.; Detoni, I. B.; Oliveira, L. A.; Silva, W. B.; Medeiros, D.B.; Picoli, E. A. T. et al.; Ribeiro, A.; Fernie, A. R.; DaMatta, F. M.; Martins, S. C. V.; Araújo, W. L.: Elevated [CO2] mitigates the impacts of heat stress in eucalyptus seedlings. Theoretical and Experimental Plant Physiology 34, S. 447 - 462 (2022)

MPG.PuRe

29.

Zeitschriftenartikel

Bohra, A.; Tiwari, A.; Kaur, P.; Ganie, S. A.; Raza, A.; Roorkiwal, M.; Mir, R. R.; Fernie, A. R.; Smýkal, P.; Varshney, R. K.: The Key to the Future Lies in the Past: Insights from Grain Legume Domestication and Improvement Should Inform Future Breeding Strategies. Plant and Cell Physiology 63 (11), S. 1554 - 1572 (2022)

MPG.PuRe

30.

Zeitschriftenartikel

Yin, Z.; Dong, T.; Huang, W.; Du, M.; Chen, D.; Fernie, A. R.; Yi, G.; Yan, S.: Spatially resolved metabolomics reveals variety-specific metabolic changes in banana pulp during postharvest senescence. FOOD CHEMISTRY: X 15, 100371 (2022)

MPG.PuRe

31.

Zeitschriftenartikel

Blankenagel, S.; Eggels, S.; Frey, M.; Grill, E.; Bauer, E.; Dawid, C.; Fernie, A. R.; Haberer, G.; Hammerl, R.; Medeiros, D.B. et al.; Ouzunova, M.; Presterl, T.; Ruß, V.; Schäufele, R.; Schlüter, U.; Tardieu, F.; Urbany, C.; Urzinger, S.; Weber, A. P. M.; Schön, C.-C.; Avramova, V.: Natural alleles of the abscisic acid catabolism gene ZmAbh4 modulate water use efficiency and carbon isotope discrimination in maize. The Plant Cell 34 (10), S. 3860 - 3872 (2022)

MPG.PuRe

32.

Zeitschriftenartikel

de Souza, L. P.; Naake, T.; Fernie, A. R.: Computational approaches that aid annotation in metabolomics. Trends in Plant Science 27 (10), S. 1077 - 1078 (2022)

MPG.PuRe

33.

Zeitschriftenartikel

Zhan, C.; Shen, S.; Yang, C.; Liu, Z.; Fernie, A. R.; Graham, I. A.; Luo, J.: Plant metabolic gene clusters in the multi-omics era. Trends in Plant Science 27 (10), S. 981 - 1001 (2022)

MPG.PuRe

34.

Zeitschriftenartikel

Barros, J. A. S.; Cavalcanti, J. H. F.; Pimentel, K. G.; Medeiros, D.B.; Silva, J. C. F.; Condori-Apfata, J. A.; Lapidot-Cohen, T.; Brotman, Y.; Nunes-Nesi, A.; Fernie, A. R. et al.; Avin-Wittenberg, T.; Araújo, W. L.: The Significance of WRKY45 Transcription Factor in Metabolic Adjustments During Dark-induced Leaf Senescence. Plant, Cell and Environment (9), S. 2682 - 2695 (2022)

MPG.PuRe

35.

Zeitschriftenartikel

Borghi, M.; de Souza, L. P.; Tohge, T.; Mi, J.; Melandri, G.; Proost, S.; Martins, M.; Al-Babili, S.; Bouwmeester, H.; Fernie, A. R.: High-energy-level metabolism and transport occur at the transition from closed to open flowers. Plant Physiology 190 (1), S. 319 - 339 (2022)

MPG.PuRe

36.

Zeitschriftenartikel

Medeiros, D.B.; Ishihara, H.; Guenther, M.; Rosado-Souza, L.; Fernie, A. R.; Stitt, M.; Arrivault, S.: 13CO2 Labelling Kinetics in Maize Reveal Impaired Efficiency of C4 Photosynthesis under Low Irradiance. Plant Physiology 190 (1), S. 280 - 304 (2022)

MPG.PuRe

37.

Zeitschriftenartikel

Tiozon, R.J.N.; Sartagoda, K. J. D.; Serrano, L. M. N.; Fernie, A. R.; Sreenivasulu, N.: Metabolomics based inferences to unravel phenolic compound diversity in cereals and its implications for human gut health. Trends in Food Science & Technology 127, S. 14 - 25 (2022)

MPG.PuRe

38.

Zeitschriftenartikel

Zhang, Y.; Fernie, A. R.: Dynamically regulating metabolic fluxes with synthetic metabolons. Trends in Biotechnology 40 (9), S. 1019 - 1020 (2022)

MPG.PuRe

39.

Zeitschriftenartikel

Zhou, J.; Liu, C.; Chen, Q.; Liu, L.; Niu, S.; Chen, R.; Li, K.; Sun, Y.; Shi, Y.; Yang, C. et al.; Shen, S.; Li, Y.; Xing, J.; Yuan, H.; Liu, X.; Fang, C.; Fernie, A. R.; Luo, J.: Integration of rhythmic metabolome and transcriptome provides insights into the transmission of rhythmic fluctuations and temporal diversity of metabolism in rice. SCIENCE CHINA-LIFE SCIENCES 65, S. 1764 - 1810 (2022)

MPG.PuRe

40.

Zeitschriftenartikel

Zhu, F.; Jadhav, S. S.; Tohge, T.; Salem, M. A.; Li, J. M.; Giovannoni, J. J.; Cheng, Y.; Alseekh, S.; Fernie, A. R.: A comparative transcriptomics and eQTL approach identifies SlWD40 as a tomato fruit ripening regulator. Plant Physiology 190 (1), S. 250 - 266 (2022)

MPG.PuRe

41.

Zeitschriftenartikel

Naves, E. R.; Scossa, F.; Araújo, W. L.; Nunes-Nesi, A.; Fernie, A. R.; Zsögön, A.: Heterosis for capsacinoids accumulation in chili pepper hybrids is dependent on parent-of-origin effect. Scientific Reports 12 (1), 14450 (2022)

MPG.PuRe

42.

Zeitschriftenartikel

Feitosa-Araujo, E.; da Fonseca-Pereira, P.; Pena, M.; Lana-Costa, J.; Coelho, D.; Silva, F.; Medeiros, D.B.; Linka, N.; Araujo, W.; Weber, A. et al.; Fernie, A. R.; Nunes-Nesi, A.: Mitochondrial and peroxisomal NAD(+) uptake are important for improved photosynthesis and seed yield under elevated CO2 concentrations. The Plant Journal 111 (3), S. 713 - 730 (2022)

MPG.PuRe

43.

Zeitschriftenartikel

Ishihara, H.; Alseekh, S.; Feil, R.; Perera, P.; George, G. M.; Niedzwiecki, P.; Arrivault, S.; Zeeman, S. C.; Fernie, A. R.; Lunn, J. E. et al.; Smith, A. M.; Stitt, M.: Rising rates of starch degradation during daytime and trehalose 6-phosphate optimize carbon availability. Plant Physiology 189 (4), S. 1976 - 2000 (2022)

MPG.PuRe

44.

Zeitschriftenartikel

Otero, S.; Gildea, I.; Roszak, P.; Lu, Y.; Di Vittori, V.; Bourdon, M.; Kalmbach, L.; Blob, B.; Heo, J.-o.; Peruzzo, F. et al.; Laux, T.; Fernie, A. R.; Tavares, H.; Helariutta, Y.: A root phloem pole cell atlas reveals common transcriptional states in protophloem-adjacent cells. Nature Plants 8, S. 954 - 970 (2022)

MPG.PuRe

45.

Zeitschriftenartikel

Martinez Rivas, F.J.; Blanco-Portales, R.; Molina-Hidalgo, F.; Caballero, J.; de Souza, L. P.; Alseekh, S.; Fernie, A. R.; Munoz-Blanco, J.; Rodriguez-Franco, A.: Azacytidine arrests ripening in cultivated strawberry (Fragaria x ananassa) by repressing key genes and altering hormone contents. BMC Plant Biology 22 (1), 278 (2022)

MPG.PuRe

46.

Zeitschriftenartikel

Pereira, A. M.; Martins, A. O.; Batista-Silva, W.; Condori-Apfata, J. A.; Nascimento, V. L.; Silva, V. F.; Oliveira, L. A.; Medeiros, D.B.; Martins, S. C. V.; Fernie, A. R. et al.; Nunes-Nesi, A.; Araújo, W. L.: Elevated carbon assimilation and metabolic reprogramming in tomato high pigment mutants support the increased production of pigments. Plant Cell Reports 41, S. 1907 - 1929 (2022)

MPG.PuRe

47.

Zeitschriftenartikel

Martinez Rivas, F.J.; Blanco-Portales, R.; Moyano, E.; Alseekh, S.; Caballero, J. L.; Schwab, W.; Fernie, A. R.; Muñoz-Blanco, J.; Molina-Hidalgo, F. J.: Strawberry fruit FanCXE1 carboxylesterase is involved in the catabolism of volatile esters during the ripening process. Horticulture Research 9, uhac095 (2022)

MPG.PuRe

48.

Zeitschriftenartikel

Sageman-Furnas, K.; Nurmi, M.; Contag, M.; Plötner, B.; Alseekh, S.; Wiszniewski, A.A.G.; Fernie, A. R.; Smith, L. M.; Laitinen, R. A.: A. thaliana Hybrids Develop Growth Abnormalities Through Integration of Stress, Hormone and Growth Signalling. Plant and Cell Physiology 63 (7), S. 944 - 954 (2022)

MPG.PuRe

49.

Zeitschriftenartikel

Batista-Silva, W.; de Oliveira; Carvalho, A.; Oliveira Martins, A.; Siqueira, J. A.; Rodrigues-Salvador, A.; Omena-Garcia, R. P.; Medeiros, D.B.; Peres, L. E. P.; Ribeiro, D. M. et al.; Zsögön, A.; Fernie, A. R.; Nunes-Nesi, A.; Araújo, W. L.: Reduced auxin signalling through the cyclophilin DIAGEOTROPICA impacts tomato fruit development and metabolism during ripening. Journal of Experimental Botany 73 (12), S. 4113 - 4128 (2022)

MPG.PuRe

50.

Zeitschriftenartikel

Tabatabaei, I.; Alseekh, S.; Shahid, M.; Leniak, E.; Wagner, M.; Mahmoudi, H.; Thushar, S.; Fernie, A. R.; Murphy, K. M.; Schmöckel, S. M. et al.; Tester, M.; Mueller-Roeber, B.; Skirycz, A.; Balazadeh, S.: The diversity of quinoa morphological traits and seed metabolic composition. Scientific Data 9 (1), 323 (2022)

MPG.PuRe