Zeitschriftenartikel (881)

651.
Zeitschriftenartikel
Sulpice, R.; Trenkamp, S.; Steinfath, M.; Usadel, B.; Gibon, Y.; Witucka-Wall, H.; Pyl, E. T.; Tschoep, H.; Steinhauser, M.-C.; Guenther, M. et al.; Hoehne, M.; Rohwer, J. M.; Altmann, T.; Fernie, A. R.; Stitt, M.: Network analysis of enzyme activities and metabolite levels and their relationship to biomass in a large panel of Arabidopsis accessions. The Plant Cell 22 (8), S. 2872 - 2893 (2010)
652.
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Sweetlove, L. J.; Beard, K. F. M.; Nunes-Nesi, A.; Fernie, A. R.; Ratcliffe, R. G.: Not just a circle: flux modes in the plant TCA cycle. Trends in Plant Science 15 (8), S. 462 - 470 (2010)
653.
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Taylor, L.; Nunes-Nesi, A.; Parsley, K.; Leiss, A.; Leach, G.; Coates, S.; Wingler, A.; Fernie, A. R.; Hibberd, J. M.: Cytosolic pyruvate,orthophosphate dikinase functions in nitrogen remobilization during leaf senescence and limits individual seed growth and nitrogen content. The Plant Journal 62 (4), S. 641 - 652 (2010)
654.
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Tohge, T.; Fernie, A. R.: Combining genetic diversity, informatics and metabolomics to facilitate annotation of plant gene function. Nature Protocols 5 (6), S. 1210 - 1227 (2010)
655.
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van der Merwe, M. J.; Osorio, S.; Araujo, W. L.; Balbo, I.; Nunes-Nesi, A.; Maximova, E.; Carrari, F.; Bunik, V. I.; Persson, S.; Fernie, A. R.: Tricarboxylic Acid Cycle Activity Regulates Tomato Root Growth via Effects on Secondary Cell Wall Production. Plant Physiology 153 (2), S. 611 - 621 (2010)
656.
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van Dongen, J. T.; Schauer, N.: Metabolic marker as selection tool in plant breeding. Information Systems for Biotechnology News Reports 11, S. 7 - 10 (2010)
657.
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Vogel, J. T.; Walter, M. H.; Giavalisco, P.; Lytovchenko, A.; Kohlen, W.; Charnikhova, T.; Simkin, A. J.; Goulet, C.; Strack, D.; Bouwmeester, H. J. et al.; Fernie, A. R.; Klee, H. J.: SlCCD7 controls strigolactone biosynthesis, shoot branching and mycorrhiza-induced apocarotenoid formation in tomato. The Plant Journal 61 (2), S. 300 - 311 (2010)
658.
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Zarafshani, Z.; Obata, T.; Lutz, J. F.: Smart PEGylation of Trypsin. Biomacromolecules 11 (8), S. 2130 - 2135 (2010)
659.
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Angelovici, R.; Fait, A.; Zhu, X. H.; Szymanski, J.; Feldmesser, E.; Fernie, A. R.; Galili, G.: Deciphering Transcriptional and Metabolic Networks Associated with Lysine Metabolism during Arabidopsis Seed Development. Plant Physiology 151 (4), S. 2058 - 2072 (2009)
660.
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Brautigam, K.; Dietzel, L.; Kleine, T.; Stroher, E.; Wormuth, D.; Dietz, K. J.; Radke, D.; Wirtz, M.; Hell, R.; Doermann, P. et al.; Nunes-Nesi, A.; Schauer, N.; Fernie, A. R.; Oliver, S. N.; Geigenberger, P.; Leister, D.; Pfannschmidt, T.: Dynamic Plastid Redox Signals Integrate Gene Expression and Metabolism to Induce Distinct Metabolic States in Photosynthetic Acclimation in Arabidopsis. The Plant Cell 21 (9), S. 2715 - 2732 (2009)
661.
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Bunik, V. I.; Fernie, A. R.: Metabolic control exerted by the 2-oxoglutarate dehydrogenase reaction: a cross-kingdom comparison of the crossroad between energy production and nitrogen assimilation. Biochemical Journal 422 (3), S. 405 - 421 (2009)
662.
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Depuydt, S.; Trenkamp, S.; Fernie, A. R.; Elftieh, S.; Renou, J. P.; Vuylsteke, M.; Holsters, M.; Vereecke, D.: An Integrated Genomics Approach to Define Niche Establishment by Rhodococcus fascians. Plant Physiology 149 (3), S. 1366 - 1386 (2009)
663.
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Fernie, A. R.; Martinoia, E.: Malate. Jack of all trades or master of a few? Phytochemistry 70 (7), S. 828 - 832 (2009)
664.
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Fernie, A. R.; Schauer, N.: Metabolomics-assisted breeding: a viable option for crop improvement? Trends in Genetics 25 (1), S. 39 - 48 (2009)
665.
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Gilbert, L.; Alhagdow, M.; Nunes-Nesi, A.; Quemener, B.; Guillon, F.; Bouchet, B.; Faurobert, M.; Gouble, B.; Page, D.; Garcia, V. et al.; Petit, J.; Stevens, R.; Causse, M.; Fernie, A. R.; Lahaye, M.; Rothan, C.; Baldet, P.: GDP-d-mannose 3,5-epimerase (GME) plays a key role at the intersection of ascorbate and non-cellulosic cell-wall biosynthesis in tomato. The Plant Journal 60 (3), S. 499 - 508 (2009)
666.
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Janacek, S. H.; Trenkamp, S.; Palmer, B.; Brown, N. J.; Parsley, K.; Stanley, S.; Astley, H. M.; Rolfe, S. A.; Quick, W. P.; Fernie, A. R. et al.; Hibberd, J. M.: Photosynthesis in cells around veins of the C-3 plant Arabidopsis thaliana is important for both the shikimate pathway and leaf senescence as well as contributing to plant fitness. The Plant Journal 59 (2), S. 329 - 343 (2009)
667.
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Lehmann, M.; Schwarzlander, M.; Obata, T.; Sirikantaramas, S.; Burow, M.; Olsen, C. E.; Tohge, T.; Fricker, M. D.; Moller, B. L.; Fernie, A. R. et al.; Sweetlove, L. J.; Laxa, M.: The Metabolic Response of Arabidopsis Roots to Oxidative Stress is Distinct from that of Heterotrophic Cells in Culture and Highlights a Complex Relationship between the Levels of Transcripts, Metabolites, and Flux. Molecular Plant 2 (3), S. 390 - 406 (2009)
668.
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Liu, Y. J.; Nunes-Nesi, A.; Wallstrom, S. V.; Lager, I.; Michalecka, A. M.; Norberg, F. E. B.; Widell, S.; Fredlund, K. M.; Fernie, A. R.; Rasmusson, A. G.: A Redox-Mediated Modulation of Stem Bolting in Transgenic Nicotiana sylvestris Differentially Expressing the External Mitochondrial NADPH Dehydrogenase. Plant Physiology 150 (3), S. 1248 - 1259 (2009)
669.
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Lytovchenko, A.; Beleggia, R.; Schauer, N.; Isaacson, T.; Leuendorf, J. E.; Hellmann, H.; Rose, J. K. C.; Fernie, A. R.: Application of GC-MS for the detection of lipophilic compounds in diverse plant tissues. Plant Methods 5, S. 4 (2009)
670.
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Marchive, C.; Yehudai-Resheff, S.; Germain, A.; Fei, Z. J.; Jiang, X. S.; Judkins, J.; Wu, H.; Fernie, A. R.; Fait, A.; Stern, D. B.: Abnormal Physiological and Molecular Mutant Phenotypes Link Chloroplast Polynucleotide Phosphorylase to the Phosphorus Deprivation Response in Arabidopsis. Plant Physiology 151 (2), S. 905 - 924 (2009)
671.
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Osorio, S.; Tohge, T.; Fernie, A. R.: Application of metabolomic profiling for identififying valuable traits in tomato. CAB Reviews: Perspectives in Agriculture, Veterinary Science, Nutrition and Natural Resources 4 (024), S. 1 - 9 (2009)
672.
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Palmieri, F.; Rieder, B.; Ventrella, A.; Blanco, E.; Do, P. T.; Nunes-Nesi, A.; Trauth, A. U.; Fiermonte, G.; Tjaden, J.; Agrimi, G. et al.; Kirchberger, S.; Paradies, E.; Fernie, A. R.; Neuhaus, H. E.: Molecular Identification and Functional Characterization of Arabidopsis thaliana Mitochondrial and Chloroplastic NAD(+) Carrier Proteins. The Journal of Biological Chemistry 284 (45), S. 31249 - 31259 (2009)
673.
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Rasmusson, A. G.; Fernie, A. R.; van Dongen, J. T.: Alternative oxidase: a defence against metabolic fluctuations? Physiologia Plantarum 137 (4), S. 371 - 382 (2009)
674.
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Rubin, G.; Tohge, T.; Matsuda, F.; Saito, K.; Scheible, W.-R.: Members of the LBD Family of Transcription Factors Repress Anthocyanin Synthesis and Affect Additional Nitrogen Responses in Arabidopsis. Plant Cell 21 (11), S. 3567 - 3584 (2009)
675.
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Strodtkotter, I.; Padmasree, K.; Dinakar, C.; Speth, B.; Niazi, P. S.; Wojtera, J.; Voss, I.; Do, P. T.; Nunes-Nesi, A.; Fernie, A. R. et al.; Linke, V.; Raghavendra, A. S.; Scheibe, R.: Induction of the AOX1D Isoform of Alternative Oxidase in A-thaliana T-DNA Insertion Lines Lacking Isoform AOX1A Is Insufficient to Optimize Photosynthesis when Treated with Antimycin A. Molecular Plant 2 (2), S. 284 - 297 (2009)
676.
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Sulpice, R.; Pyl, E. T.; Ishihara, H.; Trenkamp, S.; Steinfath, M.; Witucka-Wall, H.; Gibon, Y.; Usadel, B.; Poree, F.; Piques, M. C. et al.; von Korff, M.; Steinhauser, M.-C.; Keurentjes, J. J. B.; Guenther, M.; Hoehne, M.; Selbig, J.; Fernie, A. R.; Altmann, T.; Stitt, M.: Starch as a major integrator in the regulation of plant growth. Proceedings of the National Academy of Sciences of the United States of America 106 (25), S. 10348 - 10353 (2009)
677.
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Tohge, T.; Fernie, A. R.: Web-based resources for mass-spectrometry-based metabolomics: A user's guide. Phytochemistry 70 (4), S. 450 - 456 (2009)
678.
Zeitschriftenartikel
Tohge, T.; Nunes-Nesi, A.; Fernie, A. R.: Finding the paths -metabolomics and approaches to metabolic flux analysis for defining metabolic pathways and their regulation. Biochemist 31, S. 2 - 6 (2009)
679.
Zeitschriftenartikel
Trenkamp, S.; Eckes, P.; Busch, M.; Fernie, A. R.: Temporally resolved GC-MS-based metabolic profiling of herbicide treated plants treated reveals that changes in polar primary metabolites alone can distinguish herbicides of differing mode of action. Metabolomics 5 (3), S. 277 - 291 (2009)
680.
Zeitschriftenartikel
Tschoep, H.; Gibon, Y.; Carillo, P.; Armengaud, P.; Szecowka, M.; Nunes-Nesi, A.; Fernie, A. R.; Koehl, K. I.; Stitt, M.: Adjustment of growth and central metabolism to a mild but sustained nitrogen-limitation in Arabidopsis. Plant, Cell and Environment 32 (3), S. 300 - 318 (2009)
681.
Zeitschriftenartikel
van der Merwe, M. J.; Osorio, S.; Moritz, T.; Nunes-Nesi, A.; Fernie, A. R.: Decreased Mitochondrial Activities of Malate Dehydrogenase and Fumarase in Tomato Lead to Altered Root Growth and Architecture via Diverse Mechanisms. Plant Physiology 149 (2), S. 653 - 669 (2009)
682.
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van Dongen, J. T.; Frohlich, A.; Ramirez-Aguilar, S. J.; Schauer, N.; Fernie, A. R.; Erban, A.; Kopka, J.; Clark, J.; Langer, A.; Geigenberger, P.: Transcript and metabolite profiling of the adaptive response to mild decreases in oxygen concentration in the roots of arabidopsis plants. Annals of Botany 103 (2), S. 269 - 280 (2009)
683.
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Wang, H.; Schauer, N.; Usadel, B.; Frasse, P.; Zouine, M.; Hernould, M.; Latche, A.; Pech, J. C.; Fernie, A. R.; Bouzayen, M.: Regulatory Features Underlying Pollination-Dependent and -Independent Tomato Fruit Set Revealed by Transcript and Primary Metabolite Profiling. The Plant Cell 21 (5), S. 1428 - 1452 (2009)
684.
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Weigelt, K.; Kuester, H.; Rutten, T.; Fait, A.; Fernie, A. R.; Miersch, O.; Wasternack, C.; Emery, R. J. N.; Desel, C.; Hosein, F. et al.; Mueller, M.; Saalbach, I.; Weber, H.: ADP-Glucose Pyrophosphorylase-Deficient Pea Embryos Reveal Specific Transcriptional and Metabolic Changes of Carbon-Nitrogen Metabolism and Stress Responses. Plant Physiology 149 (1), S. 395 - 411 (2009)
685.
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Wirth, J.; Poletti, S.; Aeschlimann, B.; Yakandawala, N.; Drosse, B.; Osorio, S.; Tohge, T.; Fernie, A. R.; Gunther, D.; Gruissem, W. et al.; Sautter, C.: Rice endosperm iron biofortification by targeted and synergistic action of nicotianamine synthase and ferritin. Plant Biotechnology Journal 7 (7), S. 631 - 644 (2009)
686.
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Zanor, M. I.; Osorio, S.; Nunes-Nesi, A.; Carrari, F.; Lohse, M.; Usadel, B.; Kuehn, C.; Bleiss, W.; Giavalisco, P.; Willmitzer, L. et al.; Sulpice, R.; Zhou, Y. H.; Fernie, A. R.: RNA Interference of LIN5 in Tomato Confirms Its Role in Controlling Brix Content, Uncovers the Influence of Sugars on the Levels of Fruit Hormones, and Demonstrates the Importance of Sucrose Cleavage for Normal Fruit Development and Fertility. Plant Physiology 150 (3), S. 1204 - 1218 (2009)
687.
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Zanor, M. I.; Rambla, J. L.; Chaib, J.; Steppa, A.; Medina, A.; Granell, A.; Fernie, A. R.; Causse, M.: Metabolic characterization of loci affecting sensory attributes in tomato allows an assessment of the influence of the levels of primary metabolites and volatile organic contents. Journal of Experimental Botany 60 (7), S. 2139 - 2154 (2009)
688.
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Allen, A. E.; LaRoche, J.; Maheswari, U.; Lommer, M.; Schauer, N.; Lopez, P. J.; Finazzi, G.; Fernie, A. R.; Bowler, C.: Whole-cell response of the pennate diatom Phaeodactylum tricornutum to iron starvation. Proceedings of the National Academy of Sciences of the United States of America 105 (30), S. 10438 - 10443 (2008)
689.
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Araujo, W. L.; Nunes-Nesi, A.; Trenkamp, S.; Bunik, V. I.; Fernie, A. R.: Inhibition of 2-Oxoglutarate Dehydrogenase in Potato Tuber Suggests the Enzyme Is Limiting for Respiration and Confirms Its Importance in Nitrogen Assimilation. Plant Physiology 148 (4), S. 1782 - 1796 (2008)
690.
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Bermudez, L.; Urias, U.; Milstein, D.; Kamenetzky, L.; Asis, R.; Fernie, A. R.; van Sluys, M. A.; Carrari, F.; Rossi, M.: A candidate gene survey of quantitative trait loci affecting chemical composition in tomato fruit. Journal of Experimental Botany 59 (10), S. 2875 - 2890 (2008)
691.
Zeitschriftenartikel
Boettcher, C.; Centeno, D.; Freitag, J.; Hoefgen, R.; Koehl, K. I.; Kopka, J.; Kroymann, J.; Matros, A.; Mock, H.-P.; Neumann, S. et al.; Pfalz, M.; von Roepenack-Lahaye, E.; Schauer, N.; Trenkamp, S.; Zurbriggen, M.; Fernie, A. R.: Teaching (and learning from) metabolomics: The 2006 PlantMetaNet ETNA Metabolomics Research School. Physiologia Plantarum 132 (2), S. 136 - 149 (2008)
692.
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Centeno, D. C.; Oliver, S. N.; Nunes-Nesi, A.; Geigenberger, P.; Machado, D. N.; Loureiro, M. E.; Silva, M. A. P.; Fernie, A. R.: Metabolic regulation of pathways of carbohydrate oxidation in potato (Solanum tuberosum) tubers. Physiologia Plantarum 133 (4), S. 744 - 754 (2008)
693.
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Chen, S.; Hajirezaei, M.-R.; Zanor, M. I.; Hornyik, C.; Debast, S.; Lacomme, C.; Fernie, A. R.; Sonnewald, U.; Bornke, F.: RNA interference-mediated repression of sucrose-phosphatase in transgenic potato tubers (Solanum tuberosum) strongly affects the hexose-to-sucrose ratio upon cold storage with only minor effects on total soluble carbohydrate accumulation. Plant, Cell and Environment 31 (1), S. 165 - 176 (2008)
694.
Zeitschriftenartikel
DaMatta, F. M.; Cunha, R. L.; Antunes, W. C.; Martins, S. C. V.; Araujo, W. L.; Fernie, A. R.; Moraes, G. A. B. K.: In field-grown coffee trees source-sink manipulation alters photosynthetic rates, independently of carbon metabolism, via alterations in stomatal function. New Phytologist 178 (2), S. 348 - 357 (2008)
695.
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Fait, A.; Fromm, H.; Walther, D.; Galili, G.; Fernie, A. R.: Highway or byway: the metabolic role of the GABA shunt in plants. Trends in Plant Science 13 (1), S. 14 - 19 (2008)
696.
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Fait, A.; Hanhineva, K.; Beleggia, R.; Dai, N.; Rogachev, I.; Nikiforova, V. J.; Fernie, A. R.; Aharoni, A.: Reconfiguration of the achene and receptacle metabolic networks during strawberry fruit development. Plant Physiology 148 (2), S. 730 - 750 (2008)
697.
Zeitschriftenartikel
Farre, E. M.; Fernie, A. R.; Willmitzer, L.: Analysis of subcellular metabolite levels of potato tubers (Solanum tuberosum) displaying alterations in cellular or extracellular sucrose metabolism. Metabolomics 4 (2), S. 161 - 170 (2008)
698.
Zeitschriftenartikel
Fettke, J.; Nunes-Nesi, A.; Alpers, J.; Szkop, M.; Fernie, A. R.; Steup, M.: Alterations in Cytosolic Glucose-Phosphate Metabolism Affect Structural Features and Biochemical Properties of Starch-Related Heteroglycans. Plant Physiology 148 (3), S. 1614 - 1629 (2008)
699.
Zeitschriftenartikel
Mazzella, M. A.; Zanor, M. I.; Fernie, A. R.; Casal, J. J.: Metabolic responses to red/far-red ratio and ontogeny show poor correlation with the growth rate of sunflower stems. Journal of Experimental Botany 59 (9), S. 2469 - 2477 (2008)
700.
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Morgan, M. J.; Lehmann, M.; Schwarzlander, M.; Baxter, C. J.; Sienkiewicz-Porzucek, A.; Williams, T. C. R.; Schauer, N.; Fernie, A. R.; Fricker, M. D.; Ratcliffe, R. G. et al.; Sweetlove, L. J.; Finkemeier, I.: Decrease in manganese superoxide dismutase leads to reduced root growth and affects tricarboxylic acid cycle flux and mitochondrial redox homeostasis. Plant Physiology 147 (1), S. 101 - 114 (2008)
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