Publications of A. R. Fernie

Journal Article (947)

1.
Journal Article
Wang, S.; Li, Y.; He, L.; Yang, J.; Fernie, A. R.; Luo, J.: Natural variance at the interface of plant primary and specialized metabolism. Current Opinion in Plant Biology 67, 102201 (2022)
2.
Journal Article
Zhu, F.; Jadhav, S. S.; Tohge, T.; Salem, M. A.; Li, J. M.; Giovannoni, J. J.; Cheng, Y.; Alseekh, S.; Fernie, A. R.: A comparative transcriptomics and eQTL approach identifies SlWD40 as a tomato fruit ripening regulator. Plant Physiology (2022)
3.
Journal Article
Rodrigues-Salvador, A.; Lana-Costa, J.; Omena-Garcia, R.P.; Batista-Silva, W.; Scossa, F.; Rosado-Souza, L.; Pérez-Díaz, J.L.; Menezes-Silva, P.E.; DaMatta, F.M.; Sulpice, R. et al.; Araújo, W.L.; Zsögön, A.; Fernie, A. R.; Nunes-Nesi, A.: Metabolic shifts during fruit development in pungent and non-pungent peppers. Food Chemistry 375, 131850 (2022)
4.
Journal Article
Amanda, D.; Frey, F. P.; Neumann, U.; Przybyl, M.; Šimura, J.; Zhang, Y.; Chen, Z.; Gallavotti, A.; Fernie, A. R.; Ljung, K. et al.; Acosta, I. F.: Auxin boosts energy generation pathways to fuel pollen maturation in barley. Current Biology 32 (8), pp. 1798 - 1811 (2022)
5.
Journal Article
Siqueira, J.; Wakin, T.; Batista-Silva, W.; Silva, J.; Vicente, M.; Silva, J.; Clarindo, W.; Zsogon, A.; Peres, L.; De Veylder, L. et al.; Fernie, A. R.; Nunes-Nesi, A.; Araujo, W.: A long and stressful day: Photoperiod shapes aluminium tolerance in plants. Journal of Hazardous Materials 432, 128704 (2022)
6.
Journal Article
Ishihara, H.; Alseekh, S.; Feil, R.; Perera, P.; George, G. M.; Niedzwiecki, P.; Arrivault, S.; Zeeman, S. C.; Fernie, A. R.; Lunn, J. E. et al.; Smith, A. M.; Stitt, M.: Rising rates of starch degradation during daytime and trehalose 6-phosphate optimize carbon availability. Plant Physiology, kiac162 (2022)
7.
Journal Article
Batista-Silva, W.; de Oliveira; Carvalho, A.; Oliveira Martins, A.; Siqueira, J. A.; Rodrigues-Salvador, A.; Omena-Garcia, R. P.; Medeiros, D.B.; Peres, L. E. P.; Ribeiro, D. M. et al.; Zsögön, A.; Fernie, A. R.; Nunes-Nesi, A.; Araújo, W. L.: Reduced auxin signalling through the cyclophilin DIAGEOTROPICA impacts tomato fruit development and metabolism during ripening. Journal of Experimental Botany, erac143 (2022)
8.
Journal Article
Einhardt, A.M.; Oliveira, L.M.; Ferreira, S.; Araújo, W.L.; Medeiros, D.B.; Fernie, A. R.; Rodrigues, F.Á.: Defense responses and oxidative metabolism of glyphosate-resistant soybean plants infected by Phakopsora pachyrhizi modulated by glyphosate and nickel. Physiological and Molecular Plant Pathology 118, 101817 (2022)
9.
Journal Article
Luo, Y.; Zhang, M.; Liu, Y.; Liu, J.; Li, W.; Chen, G.; Peng, Y.; Jin, M.; Wei, W.; Jian, L. et al.; Yan, J.; Fernie, A. R.; Yan, J.: Genetic variation in YIGE1 contributes to ear length and grain yield in maize. New Phytologist 234 (2), pp. 513 - 526 (2022)
10.
Journal Article
Naves, E. R.; Scossa, F.; Araújo, W. L.; Nunes-Nesi, A.; Fernie, A. R.; Zsögön, A.: Heterosis and reciprocal effects for agronomic and fruit traits in Capsicum pepper hybrids. Scientia Horticulturae 295, 110821 (2022)
11.
Journal Article
Powell, A. F.; Feder, A.; Li, J.; Schmidt, M. H.-W.; Courtney, L.; Alseekh, S.; Jobson, E. M.; Vogel, A.; Xu, Y.; Lyon, D. et al.; Dumschott, K.; McHale, M.; Sulpice, R.; Bao, K.; Lal, R.; Duhan, A.; Hallab, A.; Denton, A. K.; Bolger, M. E.; Fernie, A. R.; Hind, S. R.; Mueller, L. A.; Martin, G. B.; Fei, Z.; Martin, C.; Giovannoni, J. J.; Strickler, S. R.; Usadel, B.: A Solanum lycopersicoides reference genome facilitates insights into tomato specialized metabolism and immunity. The Plant Journal (2022)
12.
Journal Article
Sageman-Furnas, K.; Nurmi, M.; Contag, M.; Plötner, B.; Alseekh, S.; Wiszniewski, A.A.G.; Fernie, A. R.; Smith, L. M.; Laitinen, R. A.: A. thaliana Hybrids Develop Growth Abnormalities Through Integration of Stress, Hormone and Growth Signalling. Plant and Cell Physiology (2022)
13.
Journal Article
Sreenivasulu, N.; Fernie, A. R.: Diversity: current and prospective secondary metabolites for nutrition and medicine. Current Opinion in Biotechnology 74, pp. 164 - 170 (2022)
14.
Journal Article
Zhu, F.; Wijesingha Ahchige, M.; Brotman, Y.; Alseekh, S.; Zsögön, A.; Fernie, A. R.: Bringing more players into play: Leveraging stress in genome wide association studies. Journal of Plant Physiology 271, 153657 (2022)
15.
Journal Article
Chen, W.; Chen, L.; Zhang, X.; Guo, N. Y.; Wan, M.; Zhao, X.; Yin, P.; Cai, L.; Xu, J.; Zhang, L. et al.; Han, Y.; Xiao, Y.; Xu, G.; Wang, Y.; Wang, S.; Wu, S.; Yang, F.; Jackson, D.; Cheng, J.; Chen, S.; Sun, C.; Qin, F.; Tian, F.; Fernie, A. R.; Li, J.; Yan, J.; Yang, X.: Convergent selection of a WD40 protein that enhances grain yield in maize and rice. Science 375 (6587), eabg7985 (2022)
16.
Journal Article
Li, P.; Ye, Z.; Fu, J.; Xu, Y.; Shen, Y.; Zhang, Y.; Tang, D.; Li, P.; Zuo, H.; Tong, W. et al.; Wang, S.; Fernie, A. R.; Zhao, J.: CsMYB184 regulates caffeine biosynthesis in tea plants. Plant Biotechnology Journal (2022)
17.
Journal Article
Skirycz, A.; Fernie, A. R.: Past accomplishments and future challenges of the multi-omics characterization of leaf growth. Plant Physiology (2022)
18.
Journal Article
Chen, M.; Huang, W.; Yin, Z.; Zhang, W.; Kong, Q.; Wu, S.; Li, W.; Bai, Z.; Fernie, A. R.; Huang, X. et al.; Yan, S.: Environmentally-driven metabolite and lipid variations correspond to altered bioactivities of black wolfberry fruit. Food Chemistry 372, 131342 (2022)
19.
Journal Article
Li, P.; Xia, E.; Fu, J.; Xu, Y.; Zhao, X.; Tong, W.; Tang, Q.; Tadege, M.; Fernie, A. R.; Zhao, J.: Diverse roles of MYB transcription factors in regulating secondary metabolite biosynthesis, shoot development, and stress responses in tea plants (Camellia sinensis). The Plant Journal (2022)
20.
Journal Article
Zhou, J.; Liu, C.; Chen, Q.; Liu, L.; Niu, S.; Chen, R.; Li, K.; Sun, Y.; Shi, Y.; Yang, C. et al.; Shen, S.; Li, Y.; Xing, J.; Yuan, H.; Liu, X.; Fang, C.; Fernie, A. R.; Luo, J.: Integration of rhythmic metabolome and transcriptome provides insights into the transmission of rhythmic fluctuations and temporal diversity of metabolism in rice. SCIENCE CHINA-LIFE SCIENCES (2022)
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