Publikationen von A. R. Fernie

Toepfer, N.; Caldana, C.; Grimbs, S.; Willmitzer, L.; Fernie, A. R.; Nikoloski, Z.: Integration of Genome-Scale Modeling and Transcript Profiling Reveals Metabolic Pathways Underlying Light and Temperature Acclimation in Arabidopsis. The Plant Cell 25 (4), S. 1197 - 1211 (2013)

Araujo, W. L.; Trofimova, L.; Mkrtchyan, G.; Steinhauser, D.; Krall, L.; Graf, A.; Fernie, A. R.; Bunik, V. I.: On the role of the mitochondrial 2-oxoglutarate dehydrogenase complex in amino acid metabolism. Amino Acids 44 (2), S. 683 - 700 (2013)

Antonio, C.; Mustafa, N. R.; Osorio, S.; Tohge, T.; Giavalisco, P.; Willmitzer, L.; Rischer, H.; Oksman-Caldentey, K. M.; Verpoorte, R.; Fernie, A. R.: Analysis of the interface between primary and secondary metabolism in Catharanthus roseus cell cultures using 13C-stable isotope feeding and coupled mass spectrometry. Molecular Plant 6 (2), S. 581 - 584 (2013)

Archacki, R.; Buszewicz, D.; Sarnowski, T. J.; Sarnowska, E.; Rolicka, A. T.; Tohge, T.; Fernie, A. R.; Jikumaru, Y.; Kotlinski, M.; Iwanicka-Nowicka, R. et al.; Kalisiak, K.; Patryn, J.; Halibart-Puzio, J.; Kamiya, Y.; Davis, S. J.; Koblowska, M. K.; Jerzmanowski, A.: BRAHMA ATPase of the SWI/SNF Chromatin Remodeling Complex Acts as a Positive Regulator of Gibberellin-Mediated Responses in Arabidopsis. PLoS One 8 (3), e58588 (2013)

Bocobza, S. E.; Malitsky, S.; Araujo, W. L.; Nunes-Nesi, A.; Meir, S.; Shapira, M.; Fernie, A. R.; Aharoni, A.: Orchestration of Thiamin Biosynthesis and Central Metabolism by Combined Action of the Thiamin Pyrophosphate Riboswitch and the Circadian Clock in Arabidopsis. The Plant Cell 25 (1), S. 288 - 307 (2013)

Brotman, Y.; Landau, U.; Cuadros-Inostroza, A.; Tohge, T.; Fernie, A. R.; Chet, I.; Viterbo, A.; Willmitzer, L.: Trichoderma-Plant Root Colonization: Escaping Early Plant Defense Responses and Activation of the Antioxidant Machinery for Saline Stress Tolerance. PLoS Pathogens 9 (3), e1003221 (2013)

Caldana, C.; Li, Y.; Leisse, A.; Zhang, Y.; Bartholomaeus, L.; Fernie, A. R.; Willmitzer, L.; Giavalisco, P.: Systemic Analysis of Inducible Target of Rapamycin Mutants Reveal a General Metabolic Switch Controlling Growth in Arabidopsis thaliana. The Plant Journal 73 (6), S. 897 - 909 (2013)

de Godoy, F.; Bermudez, L.; Lira, B. S.; de Souza, A. P.; Elbl, P.; Demarco, D.; Alseekh, S.; Insani, M.; Buckeridge, M.; Almeida, J. et al.; Grigioni, G.; Fernie, A. R.; Carrari, F.; Rossi, M.: Galacturonosyltransferase 4 silencing alters pectin composition and carbon partitioning in tomato. Journal of Experimental Botany 64 (8), S. 2449 - 2466 (2013)

Detmann, K.; Araujo, W.; Martins, S.; Fernie, A. R.; Damatta, F.: Metabolic alterations triggered by silicon nutrition: Is there a signaling role for silicon? Plant Signaling & Behavior 8 (1), S. e22523 (2013)

Di Matteo, A.; Ruggieri, V.; Sacco, A.; Rigano, M.; Carriero, F.; Bolger, A.; Fernie, A. R.; Frusciante, L.; Barone, A.: Identification of candidate genes for phenolic accumulation in tomato fruit. Plant Science 205-206, S. 87 - 96 (2013)

Dominguez, P. G.; Frankel, N.; Mazuch, J.; Balbo, I.; Iusem, N. D.; Fernie, A. R.; Carrari, F.: Asr1 Mediates Glucose-Hormone Crosstalk by Affecting Sugar Trafficking in Tobacco Plants. Plant Physiology 161 (3), S. 1486 - 1500 (2013)

Fernie, A. R.; Morgan, J. A.: Analysis of metabolic flux using dynamic labeling and metabolic modeling. Plant, Cell and Environment 36 (9), S. 1738 - 1750 (2013)

Fernie, A. R.; Tohge, T.: Plastic, fantastic! Phenotypic variance in the transcriptional landscape of the grape berry. Genome Biology 14 (6), 119 (2013)

Fernie, A. R.; Usadel, B.: The plant transcriptome – from integrating observations to models. Frontiers in Plant Science 4, S. 48 (2013)

Garchery, C.; Gest, N.; Do, P. T.; Alhagdow, M.; Baldet, P.; Menard, G.; Rothan, C.; Massot, C.; Gautier, H.; Aarrouf, J. et al.; Fernie, A. R.; Stevens, R.: A diminution in ascorbate oxidase activity affects carbon allocation and improves yield in tomato under water deficit. Plant Cell and Environment 36 (1), S. 159 - 175 (2013)

Gupta, K. J.; Brotman, Y.; Segu, S.; Zeier, T.; Zeier, J.; Persijn, S. T.; Cristescu, S. M.; Harren, F. J.; Bauwe, H.; Fernie, A. R. et al.; Kaiser, W. M.; Mur, L. A.: The form of nitrogen nutrition affects resistance against Pseudomonas syringae pv. phaseolicola in tobacco. Journal of Experimental Botany 64 (2), S. 553 - 868 (2013)

Koenig, D.; Jimenez-Gomez, J. M.; Kimura, S.; Fulop, D.; Chitwood, D. H.; Headland, L. R.; Kumar, R.; Covington, M. F.; Devisetty, U. K.; Tat, A. V. et al.; Tohge, T.; Bolger, A. M.; Schneeberger, K.; Ossowski, S.; Lanz, C.; Xiong, G.; Taylor-Teeples, M.; Brady, S. M.; Pauly, M.; Weigel, D.; Usadel, B.; Fernie, A. R.; Peng, J.; Sinha, N. R.; Maloof, J. N.: Comparative transcriptomics reveals patterns of selection in domesticated and wild tomato. Proceedings of the National Academy of Sciences of the United States of America 110 (28), S. E2655 - E2662 (2013)

Luo, T.; Luo, S.; Araujo, W. L.; Schlicke, H.; Rothbart, M.; Yu, J.; Fan, T.; Fernie, A. R.; Grimm, B.; Luo, M.: Virus-induced gene silencing of pea CHLI and CHLD affects tetrapyrrole biosynthesis, chloroplast development and the primary metabolic network. Plant physiology and biochemistry 65C, S. 17 - 26 (2013)

Merchante, C.; Vallarino, J. G.; Osorio, S.; Araguez, I.; Villarreal, N.; Ariza, M. T.; Martinez, G. A.; Medina-Escobar, N.; Civello, M. P.; Fernie, A. R. et al.; Botella, M. A.; Valpuesta, V.: Ethylene is involved in strawberry fruit ripening in an organ-specific manner. Journal of experimental botany 64 (14), S. 4421 - 4439 (2013)

Morgan, M. J.; Osorio, S.; Gehl, B.; Baxter, C. J.; Kruger, N. J.; Ratcliffe, R. G.; Fernie, A. R.; Sweetlove, L. J.: Metabolic engineering of tomato fruit organic Acid content guided by biochemical analysis of an introgression line. Plant Physiology 161 (1), S. 397 - 407 (2013)