Publikationen der Gruppe

Zeitschriftenartikel (127)

1. 1.
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   Haas, M.; Sprenger, H.; Zuther, E.; Peters, R.; Seddig, S.; Walther, D.; Kopka, J.; Hincha, D. K.; Koehl, K. I.: Can Metabolite- and Transcript-Based Selection for Drought Tolerance in Solanum tuberosum Replace Selection on Yield in Arid Environments? Frontiers in Plant Science 11, 1071 (2020)
2. 2.
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   Illgen, S.; Zintl, S.; Zuther, E.; Hincha, D. K.; Schmülling, T.: Characterisation of the ERF102 to ERF105 genes of Arabidopsis thaliana and their role in the response to cold stress. Plant Molecular Biology 103, S. 303 - 320 (2020)
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   Knox-Brown, P.; Rindfleisch, T.; Günther, A.; Balow, K.; Bremer, A.; Walther, D.; Miettinen, M.S.; Hincha, D. K.; Thalhammer, A.: Similar yet different–structural and functional diversity among arabidopsis thaliana LEA_4 proteins. International Journal of Molecular Sciences 21 (8), 2794 (2020)
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   Schaarschmidt, S.; Fischer, A.; Zuther, E.; Hincha, D. K.: Evaluation of seven different rna-seq alignment tools based on experimental data from the model plant arabidopsis thaliana. International Journal of Molecular Sciences 21 (5), 1720 (2020)
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   Schaarschmidt, S.; Lawas, L.M.F.; Glaubitz, U.; Li, X.; Erban, A.; Kopka, J.; Krishna Jagadish, S.V.; Hincha, D. K.; Zuther, E.: Season affects yield and metabolic profiles of rice (Oryza sativa) under high night temperature stress in the field. International Journal of Molecular Sciences 21 (9), 3187 (2020)
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   Vyse, K.; Faivre, L.; Romich, M.; Pagter, M.; Schubert, D.; Hincha, D. K.; Zuther, E.: Transcriptional and Post-Transcriptional Regulation and Transcriptional Memory of Chromatin Regulators in Response to Low Temperature. Frontiers in Plant Science 11, 39 (2020)
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   Vyse, K.; Penzlin, J.; Sergeant, K.; Hincha, D. K.; Arora, R.; Zuther, E.: Repair of sub-lethal freezing damage in leaves of Arabidopsis thaliana. BMC Plant Biology 20 (1), 35 (2020)
8. 8.
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   Lawas, L.M.F.; Erban, A.; Kopka, J.; Jagadish, S. V. K.; Zuther, E.; Hincha, D. K.: Metabolic responses of rice source and sink organs during recovery from combined drought and heat stress in the field. GigaScience 8 (8), giz102 (2019)
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   Lawas, L.M.F.; Li, X.; Erban, A.; Kopka, J.; Jagadish, S. V. K.; Zuther, E.; Hincha, D. K.: Metabolic responses of rice cultivars with different tolerance to combined drought and heat stress under field conditions. GigaScience 8 (5), giz050 (2019)
10. 10.
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    Casartelli, A.; Melino, V. J.; Baumann, U.; Riboni, M.; Suchecki, R.; Jayasinghe, N. S.; Mendis, H.; Watanabe, M.; Erban, A.; Zuther, E. et al.; Hoefgen, R.; Roessner, U.; Okamoto, M.; Heuer, S.: Opposite fates of the purine metabolite allantoin under water and nitrogen limitations in bread wheat. Plant Molecular Biology 99 (4-5), S. 477 - 497 (2019)
11. 11.
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    Koubaa, S.; Bremer, A.; Hincha, D. K.; Brini, F.: Structural properties and enzyme stabilization function of the intrinsically disordered LEA_4 protein TdLEA3 from wheat. Scientific Reports 9 (1), 3720 (2019)
12. 12.
    MPG.PuRe

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    Pérez-Díaz, J.; Pérez-Díaz, J.R.; Medeiros, D.B.; Zuther, E.; Hong, C.-Y.; Nunes-Nesi, A.; Hincha, D. K.; Ruiz-Lara, S.; Casaretto, J.A.: Transcriptome analysis reveals potential roles of a barley ASR gene that confers stress tolerance in transgenic rice. Journal of Plant Physiology 238, S. 29 - 39 (2019)
13. 13.
    MPG.PuRe

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    Schwachtje, J.; Whitcomb, S. J.; Firmino, A.; Zuther, E.; Hincha, D. K.; Kopka, J.: Induced, Imprinted, and Primed Responses to Changing Environments: Does Metabolism Store and Process Information? Frontiers in Plant Science 10, 106 (2019)
14. 14.
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    Shou, K.; Bremer, A.; Rindfleisch, T.; Knox-Brown, P.; Hirai, M.; Rekas, A.; Garvey, C.J.; Hincha, D. K.; Stadler, A.M.; Thalhammer, A.: Conformational selection of the intrinsically disordered plant stress protein COR15A in response to solution osmolarity-an X-ray and light scattering study. Physical Chemistry Chemical Physics 21 (34), S. 18727 - 18740 (2019)
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    Takahashi, D.; Gorka, M.; Erban, A.; Graf, A.; Kopka, J.; Zuther, E.; Hincha, D. K.: Both cold and sub-zero acclimation induce cell wall modification and changes in the extracellular proteome in Arabidopsis thaliana. Scientific Reports 9 (1), 2289 (2019)
16. 16.
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    Vyse, K.; Pagter, M.; Zuther, E.; Hincha, D. K.: Deacclimation after cold acclimation - a crucial, but widely neglected part of plant winter survival. The Journal of Experimental Biology 70 (18), S. 4595 - 4604 (2019)
17. 17.
    MPG.PuRe

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    Zuther, E.; Schaarschmidt, S.; Fischer, A.; Erban, A.; Pagter, M.; Mubeen, U.; Giavalisco, P.; Kopka, J.; Sprenger, H.; Hincha, D. K.: Molecular signatures associated with increased freezing tolerance due to low temperature memory in Arabidopsis. Plant, Cell and Environment 42 (3- SI), S. 854 - 873 (2019)
18. 18.
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    Beine-Golovchuk, O.; Firmino, A.; Dabrowska, A.; Schmidt, S.; Erban, A.; Walther, D.; Zuther, E.; Hincha, D. K.; Kopka, J.: Plant Temperature Acclimation and Growth Rely on Cytosolic Ribosome Biogenesis Factor Homologs. Plant Physiology 176 (3), S. 2251 - 2276 (2018)
19. 19.
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    Etemadi, M.; Zuther, E.; Müller, H.; Hincha, D. K.; Berg, G.: Ecotype-Dependent Response of Bacterial Communities Associated with Arabidopsis to Cold Acclimation. Phytobiomes 2 (1), S. 3 - 13 (2018)
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    Etemadi, M.; Zuther, E.; Müller, H.; Hincha, D. K.; Berg, G.: Ecotype-dependent response of bacterial communities associated with Arabidopsis to cold acclimation. Phytobiomes Journal 2 (1), S. 3 - 13 (2018)
21. 21.
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    Lawas, L.M.F.; Shi, W.; Yoshimoto, M.; Hasegawa, T.; Hincha, D. K.; Zuther, E.; Jagadish, S.V.K.: Combined drought and heat stress impact during flowering and grain filling in contrasting rice cultivars grown under field conditions. Field Crops Research 229, S. 66 - 77 (2018)
22. 22.
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    Lawas, L.M.F.; Zuther, E.; Jagadish, S. V. K.; Hincha, D. K.: Molecular mechanisms of combined heat and drought stress resilience in cereals. Current Opinion in Plant Biology 45, S. 212 - 217 (2018)
23. 23.
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    Mubeen, U.; Jueppner, J.; Alpers, J.; Hincha, D. K.; Giavalisco, P.: Target of Rapamycin Inhibition in Chlamydomonas reinhardtii Triggers de Novo Amino Acid Synthesis by Enhancing Nitrogen Assimilation. The Plant Cell 30 (10), S. 2240 - 2254 (2018)
24. 24.
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    Navarro-Retamal, C.; Bremer, A.; Ingolfsson, H. I.; Alzate-Morales, J.; Caballero, J.; Thalhammer, A.; Gonzalez, W.; Hincha, D. K.: Folding and Lipid Composition Determine Membrane Interaction of the Disordered Protein COR15A. Biophysical Journal 115 (6), S. 968 - 980 (2018)
25. 25.
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    Sprenger, H.; Erban, A.; Seddig, S.; Rudack, K.; Thalhammer, A.; Le, M. Q.; Walther, D.; Zuther, E.; Koehl, K. I.; Kopka, J. et al.; Hincha, D. K.: Metabolite and transcript markers for the prediction of potato drought tolerance. Plant Biotechnology Journal 16 (4), S. 939 - 950 (2018)
26. 26.
    MPG.PuRe

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    Pagter, M.; Alpers, J.; Erban, A.; Kopka, J.; Zuther, E.; Hincha, D. K.: Rapid transcriptional and metabolic regulation of the deacclimation process in cold acclimated Arabidopsis thaliana. BMC Genomics 18 (1), 731 (2017)
27. 27.
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    Andersen, U. B.; Kjaer, K. H.; Erban, A.; Alpers, J.; Hincha, D. K.; Kopka, J.; Zuther, E.; Pagter, M.: Impact of seasonal warming on overwintering and spring phenology of blackcurrant. Environmental and Experimental Botany 140, S. 96 - 109 (2017)
28. 28.
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    Bolt, S.; Zuther, E.; Zintl, S.; Hincha, D. K.; Schmülling, T.: ERF105 is a transcription factor gene of Arabidopsis thaliana required for freezing tolerance and cold acclimation. Plant, Cell and Environment 40 (1), S. 108 - 120 (2017)
29. 29.
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    Bremer, A.; Kent, B.; Hauß, T.; Thalhammer, A.; Yepuri, N. R.; Darwish, T. A.; Garvey, C. J.; Bryant, G.; Hincha, D. K.: Intrinsically Disordered Stress Protein COR15A Resides at the Membrane Surface during Dehydration. Biophysical Journa 113 (3), S. 572 - 579 (2017)
30. 30.
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    Bremer, A.; Wolff, M.; Thalhammer, A.; Hincha, D. K.: Folding of intrinsically disordered plant LEA proteins is driven by glycerol-induced crowding and the presence of membranes. The FEBS Journal 284 (6), S. 919 - 936 (2017)
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    Glaubitz, U.; Li, X.; Schaedel, S.; Erban, A.; Sulpice, R.; Kopka, J.; Hincha, D. K.; Zuther, E.: Integrated analysis of rice transcriptomic and metabolomic responses to elevated night temperatures identifies sensitivity- and tolerance-related profiles. Plant, Cell and Environment 40 (1), S. 121 - 137 (2017)
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    Ntatsi, G.; Savvas, D.; Papasotiropoulos, V.; Katsileros, A.; Zrenner, R. M.; Hincha, D. K.; Zuther, E.; Schwarz, D.: Rootstock Sub-Optimal Temperature Tolerance Determines Transcriptomic Responses after Long-Term Root Cooling in Rootstocks and Scions of Grafted Tomato Plants. Frontiers in Plant Science 8, 911 (2017)
33. 33.
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    Rudack, K.; Seddig, S.; Sprenger, H.; Koehl, K. I.; Uptmoor, R.; Ordon, F.: Drought stress-induced changes in starch yield and physiological traits in potato. Journal of Agronomy and Crop Science 203 (6), S. 494 - 505 (2017)
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    Juszczak, I.; Cvetkovic, J.; Zuther, E.; Hincha, D. K.; Baier, M.: Natural Variation of Cold Deacclimation Correlates with Variation of Cold-Acclimation of the Plastid Antioxidant System in Arabidopsis thaliana Accessions. Frontiers in Plant Science 7, 305 (2016)
35. 35.
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    Hilker, M.; Schwachtje, J.; Baier, M.; Balazadeh, S.; Bäurle, I.; Geiselhardt, S.; Hincha, D. K.; Kunze, R.; Mueller-Roeber, B.; Rillig, M. C. et al.; Rolff, J.; Romeis, T.; Schmülling, T.; Steppuhn, A.; van Dongen, J.; Whitcomb, S. J.; Wurst, S.; Zuther, E.; Kopka, J.: Priming and memory of stress responses in organisms lacking a nervous system. Biological Reviews 91 (4), S. 1118 - 1133 (2016)
36. 36.
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    Lee, Y. P.; Funk, C.; Erban, A.; Kopka, J.; Koehl, K. I.; Zuther, E.; Hincha, D. K.: Salt stress responses in a geographically diverse collection of Eutrema/Thellungiella spp. accessions. Functional Plant Biology 43, S. 590 - 606 (2016)
37. 37.
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    Navarro-Retamal, C.; Bremer, A.; Alzate-Morales, J.; Caballero, J.; Hincha, D. K.; Gonzalez, W.; Thalhammer, A.: Molecular dynamics simulations and CD spectroscopy reveal hydration-induced unfolding of the intrinsically disordered LEA proteins COR15A and COR15B from Arabidopsis thaliana. Physical Chemistry Chemical Physics 18 (37), S. 25806 - 25816 (2016)
38. 38.
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    Popova, A. V.; Hincha, D. K.: Effects of flavonol glycosides on liposome stability during freezing and drying. Biochimica et Biophysica Acta (BBA) - Biomembranes 1858 (12), S. 3050 - 3060 (2016)
39. 39.
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    Schulz, E.; Tohge, T.; Zuther, E.; Fernie, A. R.; Hincha, D. K.: Flavonoids are determinants of freezing tolerance and cold acclimation in Arabidopsis thaliana. Scientific Reports 6, 34027 (2016)
40. 40.
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    Sprenger, H.; Kurowsky, C.; Horn, R.; Erban, A.; Seddig, S.; Rudack, K.; Fischer, A.; Walther, D.; Zuther, E.; Koehl, K. I. et al.; Hincha, D. K.; Kopka, J.: The drought response of potato reference cultivars with contrasting tolerance. Plant Cell Environment 39 (11), S. 2370 - 2389 (2016)
41. 41.
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    Schulz, E.; Tohge, T.; Zuther, E.; Fernie, A. R.; Hincha, D. K.: Natural variation in flavonol and anthocyanin metabolism during cold acclimation in Arabidopsis thaliana accessions. Plant, Cell and Environment 38 (8), S. 1658 - 1672 (2015)
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    Xu, E.; Vaahtera, L.; Horak, H.; Hincha, D. K.; Heyer, A. G.; Brosche, M.: Quantitative trait loci mapping and transcriptome analysis reveal candidate genes regulating the response to ozone in Arabidopsis thaliana. Plant, Cell and Environment 38 (7), S. 1418 - 1433 (2015)
43. 43.
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    Glaubitz, U.; Erban, A.; Kopka, J.; Hincha, D. K.; Zuther, E.: High night temperature strongly impacts TCA cycle, amino acid and polyamine biosynthetic pathways in rice in a sensitivity-dependent manner. Journal of Experimental Botany 66 (20), S. 6385 - 6397 (2015)
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    Le, M. Q.; Pagter, M.; Hincha, D. K.: Global changes in gene expression, assayed by microarray hybridization and quantitative RT-PCR, during acclimation of three Arabidopsis thaliana accessions to sub-zero temperatures after cold acclimation. Plant Molecular Biology 87 (1-2), S. 1 - 15 (2015)
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    Li, X.; Lawas, L. M. F.; Malo, R.; Glaubitz, U.; Erban, A.; Mauleon, R.; Heuer, S.; Zuther, E.; Kopka, J.; Hincha, D. K. et al.; Jagadish, K. S. V.: Metabolic and transcriptomic signatures of rice floral organs reveal sugar starvation as a factor in reproductive failure under heat and drought stress. Plant, Cell and Environment 38 (10), S. 2171 - 2192 (2015)
46. 46.
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    Mucha, S.; Walther, D.; Mueller, T. M.; Hincha, D. K.; Glawischnig, E.: Substantial reprogramming of the Eutrema salsugineum (Thellungiella salsuginea) transcriptome in response to UV and silver nitrate challenge. BMC Plant Biology 15, 137 (2015)
47. 47.
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    Popova, A. V.; Rausch, S.; Hundertmark, M.; Gibon, Y.; Hincha, D. K.: The intrinsically disordered protein LEA7 from Arabidopsis thaliana protects the isolated enzyme lactate dehydrogenase and enzymes in a soluble leaf proteome during freezing and drying. Biochimica et Biophysica Acta (BBA) - General Subjects 1854 (10 Pt A), S. 1517 - 1525 (2015)
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    Sprenger, H.; Rudack, K.; Schudoma, C.; Neumann, A.; Seddig, S.; Peters, R.; Zuther, E.; Kopka, J.; Hincha, D. K.; Walther, D. et al.; Koehl, K. I.: Assessment of drought tolerance and its potential yield penalty in potato. Functional Plant Biology 42 (7), S. 655 - 667 (2015)
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    Zuther, E.; Juszczak, I.; Lee, Y. P.; Baier, M.; Hincha, D. K.: Time-dependent deacclimation after cold acclimation in Arabidopsis thaliana accessions. Scientific Reports 5, 12199 (2015)
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    Thalhammer, A.; Bryant, G.; Sulpice, R.; Hincha, D. K.: Disordered Cold Regulated15 Proteins Protect Chloroplast Membranes during Freezing through Binding and Folding, But Do Not Stabilize Chloroplast Enzymes in Vivo. Plant Physiology 166 (1), S. 190 - 201 (2014)