Zeitschriftenartikel (19)

  1. 1.
    Lohse, M.; Nagel, A.; Herter, T.; May, P.; Schroda, M.; Zrenner, R.; Tohge, T.; Fernie, A. R.; Stitt, M.; Usadel, B.: Mercator: a fast and simple web server for genome scale functional annotation of plant sequence data. Plant Cell Environment 37 (5), S. 1250 - 1258 (2014)
  2. 2.
    Toepel, J.; Illmer-Kephalides, M.; Jaenicke, S.; Straube, J.; May, P.; Goesmann, A.; Kruse, O.: New insights into Chlamydomonas reinhardtii hydrogen production processes by combined microarray/RNA-seq transcriptomics. PLANT BIOTECHNOLOGY JOURNAL 11 (6), S. 717 - 733 (2013)
  3. 3.
    Thieme, C. J.; Schudoma, C.; May, P.; Walther, D.: Give It AGO: The Search for miRNA-Argonaute Sorting Signals in Arabidopsis thaliana Indicates a Relevance of Sequence Positions Other than the 5'-Position Alone. Frontiers in plant science 3, S. 272 (2012)
  4. 4.
    Branscheid, A.; Devers, E. A.; May, P.; Krajinski, F.: Distribution pattern of small RNA and degradome reads provides information on miRNA gene structure and regulation. Plant Signaling & Behavior 6 (10), S. 1609 - 1611 (2011)
  5. 5.
    Devers, E. A.; Branscheid, A.; May, P.; Krajinski, F.: Stars and Symbiosis: MicroRNA- and MicroRNA*-Mediated Transcript Cleavage Involved in Arbuscular Mycorrhizal Symbiosis. Plant Physiology 156 (4), S. 1990 - 2010 (2011)
  6. 6.
    Lenz, D.; May, P.; Walther, D.: Comparative analysis of miRNAs and their targets across four plant species. BMC Research Notes 4, S. 483 (2011)
  7. 7.
    Branscheid, A.; Sieh, D.; Pant, B. D.; May, P.; Devers, E. A.; Elkrog, A.; Schauser, L.; Scheible, W.-R.; Krajinski, F.: Expression Pattern Suggests a Role of MiR399 in the Regulation of the Cellular Response to Local Pi Increase During Arbuscular Mycorrhizal Symbiosis. Molecular Plant-Microbe Interactions 23 (7), S. 915 - 926 (2010)
  8. 8.
    May, P.; Kreuchwig, A.; Steinke, T.; Koch, I.: PTGL: a database for secondary structure-based protein topologies. Nucleic Acids Research 38 (Database issue), S. D326 - D330 (2010)
  9. 9.
    Nikoloski, Z.; May, P.; Selbig, J.: Algebraic connectivity may explain the evolution of gene regulatory networks. Journal of Theoretical Biology 267 (1), S. 7 - 14 (2010)
  10. 10.
    Schudoma, C.; May, P.; Walther, D.: Modeling RNA loops using sequence homology and geometric constraints. Bioinformatics 26 (13), S. 1671 - 1672 (2010)
  11. 11.
    Schudoma, C.; May, P.; Nikiforova, V.; Walther, D.: Sequence-structure relationships in RNA loops: establishing the basis for loop homology modeling. Nucleic Acids Research 38 (3), S. 970 - 980 (2010)
  12. 12.
    Wienkoop, S.; Weiss, J.; May, P.; Kempa, S.; Irgang, S.; Recuenco-Munoz, L.; Pietzke, M.; Schwemmer, T.; Rupprecht, J.; Egelhofer, V. et al.; Weckwerth, W.: Targeted proteomics for Chlamydomonas reinhardtii combined with rapid subcellular protein fractionation, metabolomics and metabolic flux analyses. Molecular Biosystems 6 (6), S. 1018 - 1031 (2010)
  13. 13.
    Childs, L.; Nikoloski, Z.; May, P.; Walther, D.: Identification and classification of ncRNA molecules using graph properties. Nucleic Acids Research 37 (9), S. e66 (2009)
  14. 14.
    Christian, N.; May, P.; Kempa, S.; Handorf, T.; Ebenhoeh, O.: An integrative approach towards completing genome-scale metabolic networks. Molecular Biosystems 5 (12), S. 1889 - 1903 (2009)
  15. 15.
    Guenther, S.; von Eichborn, J.; May, P.; Preissner, R.: JAIL: a structure-based interface library for macromolecules. Nucleic Acids Research 37 (Database issue), S. 338 - 341 (2009)
  16. 16.
    May, P.; Christian, J. O.; Kempa, S.; Walther, D.: ChlamyCyc: an integrative systems biology database and web-portal for Chlamydomonas reinhardtii. BMC Genomics 10, S. 209 (2009)
  17. 17.
    Pant, B. D.; Musialak-Lange, M.; Nuc, P.; May, P.; Buhtz, A.; Kehr, J.; Walther, D.; Scheible, W.-R.: Identification of Nutrient-Responsive Arabidopsis and Rapeseed MicroRNAs by Comprehensive Real-Time Polymerase Chain Reaction Profiling and Small RNA Sequencing. Plant Physiology 150 (3), S. 1541 - 1555 (2009)
  18. 18.
    May, P.; Wienkoop, S.; Kempa, S.; Usadel, B.; Christian, N.; Rupprecht, J.; Weiss, J.; Recuenco-Munoz, L.; Ebenhoeh, O.; Weckwerth, W. et al.; Walther, D.: Metabolomics- and proteomics-assisted genome annotation and analysis of the draft metabolic network of Chlamydomonas reinhardtii. Genetics 179 (1), S. 157 - 166 (2008)
  19. 19.
    Nikoloski, Z.; Grimbs, S.; May, P.; Selbig, J.: Metabolic networks are NP-hard to reconstruct. Journal of Theoretical Biology 254 (4), S. 807 - 816 (2008)

Buchkapitel (1)

  1. 20.
    May, P.; Christian, N.; Ebenhoeh, O.; Weckwerth, W.; Walther, D.: Integration of proteomic and metabolomic profiling as well as metabolic modeling for the functional analysis of metabolic networks. In: Bioinformatics for Comparative Proteomics, 2010/12/01 Aufl., S. 341 - 363 (Hg. Wu, C. H.; Chen, C.). Humana Press Inc., Totowa, NJ, USA (2011)
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