Publications of the Group

1. Araújo WL, Trofimova L, Graf A, Steinhauser D, Krall L, Fernie AR, Bunik VI (2013). On the role of the mitochondrial 2-oxoglutarate dehydrogenase complex in the amino acid metabolism. Amino Acids 44(2):683-700.

2. Caldana C, Fernie AR, Willmitzer L, Steinhauser D (2012). Unraveling retrograde signaling pathways: finding candidate signaling molecules via metabolomics and systems biology driven approaches. Front Plant Sci 3:267.

3. Steinhauser D, Fernie AR, Araújo WL (2012). Unusual cyanobacterial TCA cycles: not broken just different. Trends Plant Sci 17(9):503-9.

4. Krueger S, Steinhauser D, Willmitzer L, Giavalisco P (2012). High Resolution Plant Metabolomics: From metabolic features to compounds and from whole-cell-analysis to sub-cellular metabolic distributions. Plant J 70(1):39-50.

5. Tohge T, Ramos MS, Nunes-Nesi A, Mutwil M, Giavalisco P, Steinhauser D, Schellenberg M, Willmitzer L, Persson S, Martinoia E, Fernie AR (2011). Towards the storage metabolome: profiling the barley vacuole. Plant Physiol 157(3):1469-82.

6. Klie S, Krueger S, Krall L, Giavalisco P, Flügge UI, Willmitzer L, Steinhauser D (2011). Analysis of the compartmentalized metabolome - a validation of the non-aqueous fractionation technique. Front Plant Sci 2:55.

7. Caldana C, Degenkolbe T, Cuadros-Inostroza A, Klie S, Sulpice R, Leisse A, Steinhauser D, Fernie AR, Willmitzer L, Hannah MA (2011). High-density kinetic analysis of the metabolomic and transcriptomic response of Arabidopsis to eight environmental conditions. Plant J 67(5):869-84.

8. Krueger S, Giavalisco P, Krall L, Steinhauser MC, Büssis D, Usadel B, Flügge UI, Fernie AR, Willmitzer L, Steinhauser D (2011). A topological map of the compartmentalized Arabidopsis thaliana leaf metabolome. PLoS One 6(3):e17806.

9. Huege J, Krall L, Steinhauser MC, Giavalisco P, Rippka R, Tandeau de Marsac N, Steinhauser D (2011). Sample amount alternatives for data adjustment in comparative cyanobacterial metabolomics. Anal Bioanal Chem 399(10):3503-17.

10. Jozefczuk S, Klie S, Catchpole G, Szymanski J, Cuadros-Inostroza A, Steinhauser D, Selbig J, Willmitzer L (2010). Metabolomic and transcriptomic stress response of Escherichia coli. Mol Syst Biol 6:364.

11. Hannah MA, Caldana C, Steinhauser D, Balbo I, Fernie AR, Willmitzer L. (2010) Combined transcript and metabolite profiling of Arabidopsis thaliana grown under widely variant growth conditions facilitates the identification of novel metabolite mediated regulation of gene expression. Plant Physiol 152(4):2120-9.

12. Krall L, Huege J, Catchpole G, Steinhauser D, Willmitzer L (2009). Assessment of sampling strategies for gas chromatography-mass spectrometry (GC-MS) based metabolomics of cyanobacteria. J Chromatogr B 877(27):2952-60.

13. Krueger S, Niehl A, Lopez-Martin CM, Steinhauser D, Donath A, Hildebrandt T, Romero LC, Gotor C, Hoefgen R, Hesse H (2009). Analysis of Cytosolic and Plastidic Serine Acetyltransferase Mutants and Subcellular Metabolite Distributions Suggests Interplay of the Cellular Compartments for Cysteine Biosynthesis in Arabidopsis. Plant Cell Environ 32(4):349-67.

14. Usadel B, Obayashi T, Mutwil M, Giorgi FM, Bassel GW, Tanimoto M, Chow A, Steinhauser D, Persson S, Provart NJ (2009). Co-expression tools for plant biology: opportunities for hypothesis generation and caveats. Plant Cell Environ 32(12):1633-51.

15. Ogata Y, Sakurai N, Provart NJ, Steinhauser D, Krall L (2008). Bioinformatics Tools to Discover Co-Expressed Genes in Plants: Concepts and Protocols. In The Handbook of Plant Functional Genomics, G. Kahl and K. Meksem, eds., Wiley.

16. Steinhauser D, Krall L, Müssig C, Büssis D, Usadel B (2008). Correlation Networks. In Biological Network Analysis, B.H. Junker and F. Schreiber, eds., Book Series on Bioinformatics (Series Editors: Y. Pan and A.Y. Zomaya), Wiley.