Publications of Z. Nikoloski
All genres
Journal Article (195)
21.
Journal Article
14, 1485 (2023)
Data integration across conditions improves turnover number estimates and metabolic predictions. Nature Communications 22.
Journal Article
14, 1977 (2023)
Light-independent regulation of algal photoprotection by CO2 availability. Nature Communications 23.
Journal Article
4, e4 (2023)
Heritability of temperature-mediated flower size plasticity in Arabidopsis thaliana. Quantitative Plant Biology 24.
Journal Article
7, 71 (2022)
CUBCO+: prediction of protein complexes based on min-cut network partitioning into biclique spanned subgraphs. Applied Network Science 25.
Journal Article
25 (11), 105411 (2022)
Temperature-mediated flower size plasticity in Arabidopsis. iScience 26.
Journal Article
23 (20), 12087 (2022)
Transcriptomic and Metabolomic Analysis of a Pseudomonas-Resistant versus a Susceptible Arabidopsis Accession. International Journal of Molecular Sciences 27.
Journal Article
111 (5), pp. 1486 - 1500 (2022)
An automated workflow that generates atom mappings for large-scale metabolic models and its application to Arabidopsis thaliana. The Plant Journal 28.
Journal Article
12 (9), jkac170 (2022)
A comparative analysis of genomic and phenomic predictions of growth-related traits in 3-way coffee hybrids. G3: Genes, Genomes, Genetics 29.
Journal Article
149 (16), dev201024 (2022)
Topological properties accurately predict cell division events and organization of shoot apical meristem in Arabidopsis thaliana. Development 30.
Journal Article
20, pp. 3963 - 3971 (2022)
Relative flux trade-offs and optimization of metabolic network functionalities. Computational and Structural Biotechnology Journal 31.
Journal Article
149 (12), dev.200415 (2022)
Fluorescent cytoskeletal markers reveal associations between the actin and microtubule cytoskeleton in rice cells. Development 32.
Journal Article
8 (13), eabl6962 (2022)
The hidden simplicity of metabolic networks is revealed by multireaction dependencies. Science Advances 33.
Journal Article
9, uhac072 (2022)
Genomic prediction of morphometric and colorimetric traits in Solanaceous fruits. Horticulture Research 34.
Journal Article
18 (3), e1009906 (2022)
COMMIT: Consideration of metabolite leakage and community composition improves microbial community reconstructions. PLoS Computational Biology 35.
Journal Article
7 (1), e01216-21 (2022)
Genome-Scale Modeling Specifies the Metabolic Capabilities of Rhizophagus irregularis. mSystems 36.
Journal Article
12, 758933 (2021)
Proteogenic Dipeptides Are Characterized by Diel Fluctuations and Target of Rapamycin Complex-Signaling Dependency in the Model Plant Arabidopsis thaliana. Frontiers in Plant Science 37.
Journal Article
8, pp. 78 - 91 (2021)
Carbon flux through photosynthesis and central carbon metabolism show distinct patterns between algae, C-3 and C-4 plants. Nature Plants 38.
Journal Article
7 (51), eabi8307 (2021)
Topology of the redox network during induction of photosynthesis as revealed by time-resolved proteomics in tobacco. Science Advances 39.
Journal Article
11 (1), 23776 (2021)
Identification of flux trade-offs in metabolic networks. Scientific Reports 40.
Journal Article
894, pp. 3 - 11 (2021)
Coherent network partitions: Characterizations with cographs and prime graphs. Theoretical computer science