Publications of the Group

102.

Journal Article

Wu, G.; Meyer, E. H.; Wu, S.; Bock, R.: Extensive Posttranscriptional Regulation of Nuclear Gene Expression by Plastid Retrograde Signals. Plant Physiology 180 (4), pp. 2034 - 2048 (2019)

MPG.PuRe

103.

Journal Article

Zhan, X.; Zhang, F.; Zhong, Z.; Chen, R.; Wang, Y.; Chang, L.; Bock, R.; Nie, B.; Zhang, J.: Generation of virus-resistant potato plants by RNA genome targeting. Plant Biotechnology Journal 17 (9), pp. 1814 - 1822 (2019)

MPG.PuRe

104.

Journal Article

Hölscher, M.; Tiller, N.; Teh, A. Y.-H.; Wu, G.; Ma, J. K.-C.; Bock, R.: High-level expression of the HIV entry inhibitor griffithsin from the plastid genome and retention of biological activity in dried tobacco leaves. Plant Molecular Biology 97, pp. 357 - 370 (2018)

MPG.PuRe

105.

Journal Article

Dalal, V.; Dagan, S.; Friedlander, G.; Aviv, E.; Bock, R.; Charuvi, D.; Reich, Z.; Adam, Z.: Transcriptome analysis highlights nuclear control of chloroplast development in the shoot apex. Scientific Reports 8 (1), 8881 (2018)

MPG.PuRe

106.

Journal Article

Dickinson, P. J.; Kumar, M.; Martinho, C.; Yoo, S. J.; Lan, H.; Artavanis, G.; Charoensawan, V.; Schöttler, M. A.; Bock, R.; Jaeger, K. E. et al.; Wigge, P. A.: Chloroplast Signaling Gates Thermotolerance in Arabidopsis. Cell Reports 22 (7), pp. 1657 - 1665 (2018)

MPG.PuRe

107.

Journal Article

Fuentes, P.; Armarego-Marriott, T.; Bock, R.: Plastid transformation and its application in metabolic engineering. Current Opinion in Biotechnology 49, pp. 10 - 15 (2018)

MPG.PuRe

108.

Journal Article

Hansen, B. O.; Meyer, E. H.; Ferrari, C.; Vaid, N.; Movahedi, S.; Vandepoele, K.; Nikoloski, Z.; Mutwil, M.: Ensemble gene function prediction database reveals genes important for complex I formation in Arabidopsis thaliana. New Phytologist 217 (4), pp. 1521 - 1534 (2018)

MPG.PuRe

109.

Journal Article

Lang, D.; Ullrich, K.K.; Murat, F.; Fuchs, J.; Jenkins, J.; Haas, F.B.; Piednoel, M.; Gundlach, H.; Van Bel, M.; Meyberg, R. et al.; Vives, C.; Morata, J.; Symeonidi, A.; Hiss, M.; Muchero, W.; Kamisugi, Y.; Saleh, O.; Blanc, G.; Decker, E.L.; van Gessel, N.; Grimwood, J.; Hayes, R.D.; Graham, S.W.; Gunter, L.E.; McDaniel, S.F.; Hoernstein, S.N.W.; Larsson, A.; Li, F.-W.; Perroud, P.-F.; Phillips, J.; Ranjan, P.; Rokshar, D.S.; Rothfels, C.J.; Schneider, L.; Shu, S.; Stevenson, D.W.; Thümmler, F.; Tillich, M.; Villarreal Aguilar, J.C.; Widiez, T.; Wong, G.K.-S.; Wymore, A.; Zhang, Y.; Zimmer, A.D.; Quatrano, R.S.; Mayer, K.F.X.; Goodstein, D.; Casacuberta, J.M.; Vandepoele, K.; Reski, R.; Cuming, A.C.; Tuskan, G.A.; Maumus, F.; Salse, J.; Schmutz, J.; Rensing, S.A.: The Physcomitrella patens chromosome-scale assembly reveals moss genome structure and evolution. The Plant Journal 93 (3), pp. 515 - 533 (2018)

MPG.PuRe

110.

Journal Article

Legen, J.; Ruf, S.; Kroop, X.; Wang, G.; Barkan, A.; Bock, R.; Schmitz‐Linneweber, C.: Stabilization and translation of synthetic operon‐derived mRNAs in chloroplasts by sequences representing PPR protein‐binding sites. The Plant Journal 94 (1), pp. 8 - 21 (2018)

MPG.PuRe

111.

Journal Article

Li, Z.; Bock, R.: Replication of bacterial plasmids in the nucleus of the red alga Porphyridium purpureum. Nature Communications 9 (1), 3451 (2018)

MPG.PuRe

112.

Journal Article

Maclean, A. E.; Hertle, A. P.; Ligas, J.; Bock, R.; Balk, J.; Meyer, E. H.: Absence of Complex I Is Associated with Diminished Respiratory Chain Function in European Mistletoe. Current Biology 28 (10), pp. 1614 - 1619 (2018)

MPG.PuRe

113.

Journal Article

Meyer, E. H.; Lehmann, C.; Boivin, S.; Brings, L.; De Cauwer, I.; Bock, R.; Kühn, K.; Touzet, P.: CMS-G from Beta vulgaris ssp. maritima is maintained in natural populations despite containing an atypical cytochrome c oxidase. Biochemical Journal 475 (4), pp. 759 - 773 (2018)

MPG.PuRe

114.

Journal Article

Moreno, J.C.; Martinez-Jaime, S.; Schwartzmann, J.; Karcher, D.; Tillich, M.; Graf, A.; Bock, R.: Temporal Proteomics of Inducible RNAi Lines of Clp Protease Subunits Identifies Putative Protease Substrates. Plant Physiology 176 (2), pp. 1485 - 1508 (2018)

MPG.PuRe

115.

Journal Article

Tadini, L.; Ferrari, R.; Lehniger, M.-K.; Mizzotti, C.; Moratti, F. G.; Resentini, F.; Colombo, M.; Costa, A.; Masiero, S.; Pesaresi, P.: Trans-splicing of plastid rps12 transcripts, mediated by AtPPR4, is essential for embryo patterning in Arabidopsis thaliana. Planta 248 (1), pp. 257 - 265 (2018)

MPG.PuRe

116.

Journal Article

Trösch, R.; Barahimipour, R.; Gao, Y.; Badillo-Corona, J. A.; Gotsmann, V. L.; Zimmer, D.; Mühlhaus, T.; Zoschke, R.; Willmund, F.: Commonalities and differences of chloroplast translation in a green alga and land plants. Nature Plants 4 (8), pp. 564 - 575 (2018)

MPG.PuRe

117.

Journal Article

van Oort, B.; Roy, L. M.; Xu, P.; Lu, Y.; Karcher, D.; Bock, R.; Croce, R.: Revisiting the Role of Xanthophylls in Nonphotochemical Quenching. The Journal of Physical Chemistry Letters 9 (2), pp. 346 - 352 (2018)

MPG.PuRe

118.

Journal Article

Veyel, D.; Sokolowska, E.; Moreno, J.C.; Kierszniowska, S.; Cichon, J.; Wojciechowska, I.; Luzarowski, M.; Kosmacz, M.; Szlachetko, J.; Gorka, M. et al.; Meret, M.; Graf, A.; Meyer, E. H.; Willmitzer, L.; Skirycz, A.: PROMIS, global analysis of PROtein-metabolite interactions using size separation in Arabidopsis thaliana. The Journal of Biological Chemistry 293 (32), pp. 12440 - 12453 (2018)

MPG.PuRe

119.

Journal Article

Wang, Y.; Lysoe, E.; Armarego-Marriott, T.; Erban, A.; Paruch, L.; Van Eerde, A.; Bock, R.; Liu-Clarke, J.: Transcriptome and metabolome analyses provide insights into root and root-released organic anion responses to phosphorus deficiency in oat. Journal of Experimental Botany 69 (15), pp. 3759 - 3771 (2018)

MPG.PuRe

120.

Journal Article

Wu, G.; Chalvin, C.; Hölscher, M.; Meyer, E. H.; Wu, X. N.; Bock, R.: Control of Retrograde Signaling by Rapid Turnover of GENOMES UNCOUPLED1. Plant Physiology 176 (3), pp. 2472 - 2495 (2018)

MPG.PuRe

121.

Journal Article

Zoschke, R.; Bock, R.: Chloroplast Translation: Structural and Functional Organization, Operational Control, and Regulation. Plant Cell 30 (4), pp. 745 - 770 (2018)

MPG.PuRe

122.

Journal Article

Armbruster, U.; Correa Galvis, V.; Kunz, H.-H.; Strand, D.: The regulation of the chloroplast proton motive force plays a key role for photosynthesis in fluctuating light. Current Opinion in Plant Biology 37, pp. 56 - 62 (2017)

MPG.PuRe

123.

Journal Article

Bayer-Császár, E.; Haag, S.; Jörg, A.; Glass, F.; Härtel, B.; Obata, T.; Meyer, E. H.; Brennicke, A.; Takenaka, M.: The conserved domain in MORF proteins has distinct affinities to the PPR and E elements in PPR RNA editing factors. Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms 1860 (8), pp. 813 - 828 (2017)

MPG.PuRe

124.

Journal Article

Clarke, J. L.; Paruch, L.; Dobrica, M.-O.; Caras, I.; Tucureanu, C.; Onu, A.; Ciulean, S.; Stavaru, C.; Eerde, A.; Wang, Y. et al.; Steen, H.; Haugslien, S.; Petrareanu, C.; Lazar, C.; Popescu, C.-I.; Bock, R.; Dubuisson, J.; Branza-Nichita, N.: Lettuce-produced hepatitis C virus E1E2 heterodimer triggers immune responses in mice and antibody production after oral vaccination. Plant Biotechnology Journal 15 (12), pp. 1611 - 1621 (2017)

MPG.PuRe

125.

Journal Article

Hameed, M. W.; Juszczak, I.; Bock, R.; van Dongen, J. T.: Comparison of mitochondrial gene expression and polysome loading in different tobacco tissues. Plant Methods 13, 112 (2017)

MPG.PuRe

126.

Journal Article

Liguori, N.; Xu, P.; van Stokkum, I. H. M.; van Oort, B.; Lu, Y.; Karcher, D.; Bock, R.; Croce, R.: Different carotenoid conformations have distinct functions in light-harvesting regulation in plants. Nature Communications 8, 1994 (2017)

MPG.PuRe

127.

Journal Article

Lo Presti, L.; Zechmann, B.; Kumlehn, J.; Liang, L.; Lanver, D.; Tanaka, S.; Bock, R.; Kahmann, R.: An assay for entry of secreted fungal effectors into plant cells. New Phytologist 213 (2), pp. 956 - 964 (2017)

MPG.PuRe

128.

Journal Article

Lu, Y.; Stegemann, S.; Agrawal, S.; Karcher, D.; Ruf, S.; Bock, R.: Horizontal Transfer of a Synthetic Metabolic Pathway between Plant Species. Current Biology 27 (19), pp. 3034 - 3041 (2017)

MPG.PuRe

129.

Journal Article

Moreno, J.C.; Tiller, N.; Diez, M.; Karcher, D.; Tillich, M.; Schöttler, M. A.; Bock, R.: Generation and characterization of a collection of knock-down lines for the chloroplast Clp protease complex in tobacco. Journal of Experimental Botany 68 (9), pp. 2199 - 2218 (2017)

MPG.PuRe

130.

Journal Article

Ruf, S.; Bock, R.: Loopholes for smuggling DNA into pollen. Nature Plants 3 (12), pp. 918 - 919 (2017)

MPG.PuRe

131.

Journal Article

Scharff, L. B.; Ehrnthaler, M.; Janowski, M.; Childs, L. H.; Hasse, C.; Gremmels, J.; Ruf, S.; Zoschke, R.; Bock, R.: Shine-Dalgarno Sequences Play an Essential Role in the Translation of Plastid mRNAs in Tobacco. Plant Cell 29 (12), pp. 3085 - 3101 (2017)

MPG.PuRe

132.

Journal Article

Schöttler, M. A.; Thiele, W.; Belkius, K.; Bergner, S.V.; Flügel, C.; Wittenberg, G.; Agrawal, S.; Stegemann, S.; Ruf, S.; Bock, R.: The plastid-encoded PsaI subunit stabilizes photosystem I during leaf senescence in tobacco. Journal of Experimental Botany 68 (5), pp. 1137 - 1155 (2017)

MPG.PuRe

133.

Journal Article

Shumbe, L.; D'Alessandro, S.; Shao, N.; Chevalier, A.; Ksas, B.; Bock, R.; Havaux, M.: METHYLENE BLUE SENSITIVITY 1 (MBS1) is required for acclimation of Arabidopsis to singlet oxygen and acts downstream of β-cyclocitral. Plant Cell Environment 40 (2), pp. 216 - 226 (2017)

MPG.PuRe

134.

Journal Article

Strand, D.; Livingston, A.; Satoh-Cruz, M.; Koepke, T.; Enlow, H.; Fisher, N.; Froehlich, J.; Cruz, J.; Minhas, D.; Hixson, K. et al.; Kohzuma, K.; Lipton, M.; Dhingra, A.; Kramer, D.: Defects in the Expression of Chloroplast Proteins Leads to H2O2 Accumulation and Activation of Cyclic Electron Flow around Photosystem I. Frontiers in Plant Science 7, 2073 (2017)

MPG.PuRe

135.

Journal Article

Tabatabaei, I.; Ruf, S.; Bock, R.: A bifunctional aminoglycoside acetyltransferase/phosphotransferase conferring tobramycin resistance provides an efficient selectable marker for plastid transformation. Plant Molecular Biology 93 (3), pp. 269 - 281 (2017)

MPG.PuRe

136.

Journal Article

Tillich, M.; Lehwark, P.; Pellizzer, T.; Ulbricht-Jones, E. S.; Fischer, A.; Bock, R.; Greiner, S.: GeSeq - versatile and accurate annotation of organelle genomes. Nucleic Acids Research 45 (W1), pp. W6 - W11 (2017)

MPG.PuRe

137.

Journal Article

Vidal-Meireles, A.; Neupert, J.; Zsigmond, L.; Rosado-Souza, L.; Kovács, L.; Nagy, V.; Galambos, A.; Fernie, A. R.; Bock, R.; Tóth, S. Z.: Regulation of ascorbate biosynthesis in green algae has evolved to enable rapid stress-induced response via the VTC2 gene encoding GDP-l-galactose phosphorylase. New Phytologist 214 (2), pp. 668 - 681 (2017)

MPG.PuRe

138.

Journal Article

Wintle, B. C.; Boehm, C.R.; Rhodes, C.; Molloy, J. C.; Millett, P.; Adam, L.; Breitling, R.; Carlson, R.; Casagrande, R.; Dando, M. et al.; Doubleday, R.; Drexler, E.; Edwards, B.; Ellis, T.; Evans, N. G.; Hammond, R.; Haseloff, J.; Kahl, L.; Kuiken, T.; Lichman, B. R.; Matthewman, C. A.; Napier, J. A.; Oheigeartaigh, S. S.; Patron, N. J.; Perello, E.; Shapira, P.; Tait, J.; Takano, E.; Sutherland, W. J.: A transatlantic perspective on 20 emerging issues in biological engineering. eLife 14 (6), e30247 (2017)

MPG.PuRe

139.

Journal Article

Wittenberg, G.; Järvi, S.; Hojka, M.; Toth, S. Z.; Meyer, E. H.; Aro, E.-M.; Schöttler, M. A.; Bock, R.: Identification and characterization of a stable intermediate in photosystem I assembly in tobacco. The Plant Journal 90 (3), pp. 478 - 490 (2017)

MPG.PuRe

140.

Journal Article

Wu, Y.; You, L.; Li, S.; Ma, M.; Wu, M.; Ma, L.; Bock, R.; Chang, L.; Zhang, J.: In vivo Assembly in Escherichia coli of Transformation Vectors for Plastid Genome Engineering. Frontiers in Plant Science 8, 1454 (2017)

MPG.PuRe

141.

Journal Article

Zhang, J.; Khan, S. A.; Heckel, D. G.; Bock, R.: Next-Generation Insect-Resistant Plants: RNAi-Mediated Crop Protection. Trends in Biotechnology 35 (9 - SI), pp. 871 - 882 (2017)

MPG.PuRe

142.

Journal Article

Kudla, J.; Bock, R.: Lighting the Way to Protein-Protein Interactions: Recommendations on Best Practices for Bimolecular Fluorescence Complementation Analyses. Plant Cell 28 (5), pp. 1002 - 1008 (2016)

MPG.PuRe

143.

Journal Article

Gnanasekaran, T.; Karcher, D.; Nielsen, A. Z.; Martens, H. J.; Ruf, S.; Kroop, X.; Olsen, C. E.; Motawie, M. S.; Pribil, M.; Moller, B. L. et al.; Bock, R.; Jensen, P. E.: Transfer of the cytochrome P450-dependent dhurrin pathway from Sorghum bicolor into Nicotiana tabacum chloroplasts for light-driven synthesis. Journal of Experimental Botany 67 (8), pp. 2495 - 2506 (2016)

MPG.PuRe

144.

Journal Article

Massouh, A.; Schubert, J.; Yaneva-Roder, L.; Ulbricht-Jones, E. S.; Zupok, A.; Johnson, M. T. J.; Wright, S. I.; Pellizer, T.; Sobanski, J.; Bock, R. et al.; Greiner, S.: Spontaneous Chloroplast Mutants Mostly Occur by Replication Slippage and Show a Biased Pattern in the Plastome of Oenothera. The Plant Cell 28 (4), pp. 911 - 929 (2016)

MPG.PuRe

145.

Journal Article

Barahimipour, R.; Neupert, J.; Bock, R.: Efficient expression of nuclear transgenes in the green alga Chlamydomonas: synthesis of an HIV antigen and development of a new selectable marker. Plant Molecular Biology 90 (4-5), pp. 403 - 418 (2016)

MPG.PuRe

146.

Journal Article

Zoschke, R.; Watkins, K. P.; Miranda, R. G.; Barkan, A.: The PPR-SMR protein PPR53 enhances the stability and translation of specific chloroplast RNAs in maize. The Plant Journal 85 (5), pp. 594 - 606 (2016)

MPG.PuRe

147.

Journal Article

Armbruster, U.; Leonelli, L.; Correa Galvis, V.; Strand, D.; Quinn, E.H.; Jonikas, M.C.; Niyogi, K.K.: Regulation and levels of the thylakoid K+/H+ antiporter KEA3 shape the dynamic response of photosynthesis in fluctuating light. Plant and Cell Physiology 57 (7), pp. 1557 - 1567 (2016)

MPG.PuRe

148.

Journal Article

Fuentes, P.; Zhou, F.; Erban, A.; Karcher, D.; Kopka, J.; Bock, R.: A new synthetic biology approach allows transfer of an entire metabolic pathway from a medicinal plant to a biomass crop. eLife 5, e13664 (2016)

MPG.PuRe

149.

Journal Article

Gottschamel, J.; Loessl, A.; Ruf, S.; Wang, Y.; Skaugen, M.; Bock, R.; Clarke, J. L.: Production of dengue virus envelope protein domain III-based antigens in tobacco chloroplasts using inducible and constitutive expression systems. Plant Molecular Biology 91 (4-5), pp. 497 - 512 (2016)

MPG.PuRe

150.

Journal Article

Hameed, M. W.: Hypoxia up-regulates mitochondrial genome-encoded transcripts in Arabidopsis roots. Genes and Genetic Systems 90 (6), pp. 325 - 334 (2016)

MPG.PuRe