Publikationen von Z. Nikoloski

Zeitschriftenartikel (163)

141.
Zeitschriftenartikel
Toepfer, N., Jozefczuk, S. & Nikoloski, Z. Integration of time-resolved transcriptomics data with flux-based methods reveals stress-induced metabolic adaptation in Escherichia coli. BMC Systems Biology 6, 148 (2012).
142.
Zeitschriftenartikel
Toubiana, D., Semel, Y., Tohge, T., Beleggia, R., Cattivelli, L., Rosental, L., Nikoloski, Z., Zamir, D., Fernie, A. R. & Fait, A. Metabolic Profiling of a Mapping Population Exposes New Insights in the Regulation of Seed Metabolism and Seed, Fruit, and Plant Relations. PLoS Genetics 8, e1002612 (2012).
143.
Zeitschriftenartikel
Larhlimi, A., Blachon, S., Selbig, J. & Nikoloski, Z. Robustness of metabolic networks: A review of existing definitions. Biosystems 106, 1–8 (2011).
144.
Zeitschriftenartikel
Arnold, A. & Nikoloski, Z. A quantitative comparison of CalvinBenson cycle models. Trends in Plant Science 16, 676–683 (2011).
145.
Zeitschriftenartikel
Basler, G., Ebenhoeh, O., Selbig, J. & Nikoloski, Z. Mass-balanced randomization of metabolic networks. Bioinformatics 27, 1397–1403 (2011).
146.
Zeitschriftenartikel
Basler, G., Grimbs, S., Ebenhoeh, O., Selbig, J. & Nikoloski, Z. Evolutionary significance of metabolic network properties. Journal of the Royal Society Interface 9, 1168–1176 (2011).
147.
Zeitschriftenartikel
Basler, G. & Nikoloski, Z. JMassBalance: mass-balanced randomization and analysis of metabolic networks. Bioinformatics 27, 2761–2762 (2011).
148.
Zeitschriftenartikel
Grimbs, S., Arnold, A., Koseka, A., Kurths, J., Selbig, J. & Nikoloski, Z. Spatiotemporal dynamics of the Calvin cycle: Multistationarity and symmetry breaking instabilities. Biosystems 103, 212–223 (2011).
149.
Zeitschriftenartikel
Hempel, S., Koseska, A., Nikoloski, Z. & Kurths, J. Unraveling gene regulatory networks from time-resolved gene expression data - a measures comparison study. BMC Bioinformatics 12, 292 (2011).
150.
Zeitschriftenartikel
Hempel, S., Kurths, J., Koseska, A. & Nikoloski, Z. Inner Composition Alignment for Inferring Directed Networks from Short Time Series. Physical Review Letters 107, 054101 (2011).
151.
Zeitschriftenartikel
Lisec, J., Romisch-Margl, L., Nikoloski, Z., Piepho, H. P., Giavalisco, P., Selbig, J., Gierl, A. & Willmitzer, L. Corn hybrids display lower metabolite variability and complex metabolite inheritance patterns. The Plant Journal 68, 326–336 (2011).
152.
Zeitschriftenartikel
Mutwil, M., Klie, S., Tohge, T., Giorgi, F. M., Wilkins, O., Campbell, M. M., Fernie, A. R., Usadel, B., Nikoloski, Z. & Persson, S. PlaNet: Combined Sequence and Expression Comparisons across Plant Networks Derived from Seven Species. The Plant Cell 23, 895–910 (2011).
153.
Zeitschriftenartikel
Nikoloski, Z., Grimbs, S., Klie, S. & Selbig, J. Complexity of automated gene annotation. Biosystems 104, 1–8 (2011).
154.
Zeitschriftenartikel
Ruprecht, C., Mutwil, M., Saxe, F., Eder, M., Nikoloski, Z. & Persson, S. Large-scale co-expression approach to dissect secondary cell wall formation across plant species. Frontiers in Plant Science 2, 23 (2011).
155.
Zeitschriftenartikel
Klie, S., Nikoloski, Z. & Selbig, J. Biological Cluster Evaluation for Gene Function Prediction. Journal of Computational Biology 17, 1–18 (2010).
156.
Zeitschriftenartikel
Nikoloski, Z., May, P. & Selbig, J. Algebraic connectivity may explain the evolution of gene regulatory networks. Journal of Theoretical Biology 267, 7–14 (2010).
157.
Zeitschriftenartikel
Sajitz-Hermstein, M. & Nikoloski, Z. A novel approach for determining environment-specific protein costs: the case of Arabidopsis thaliana. Bioinformatics 26, i582–i588 (2010).
158.
Zeitschriftenartikel
Childs, L., Nikoloski, Z., May, P. & Walther, D. Identification and classification of ncRNA molecules using graph properties. Nucleic Acids Research 37, e66 (2009).
159.
Zeitschriftenartikel
Szymanski, J., Jozefczuk, S., Nikoloski, Z., Selbig, J., Nikiforova, V., Catchpole, G. & Willmitzer, L. Stability of Metabolic Correlations under Changing Environmental Conditions in Escherichia coli - A Systems Approach. PLoS One 4, e7441 (2009).
160.
Zeitschriftenartikel
Basler, G., Nikoloski, Z., Ebenhoeh, O. & Handorf, T. Biosynthetic potentials from species-specific metabolic networks. Genome Informatics 20, 135–148 (2008).
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