Publications of C. Köhler

Journal Article (90)

21.
Journal Article
Qiu, Y.; Köhler, C.: Mobility connects: transposable elements wire new transcriptional networks by transferring transcription factor binding motifs. Biochemical Society Transactions 48 (3), pp. 1005 - 1017 (2020)
22.
Journal Article
Trejo-Arellano, M. S.; Mehdi, S.; de Jonge, J.; Tomastikova, E. D.; Köhler, C.; Hennig, L.: Dark-Induced Senescence Causes Localized Changes in DNA Methylation. Plant Physiology 182 (2), pp. 949 - 961 (2020)
23.
Journal Article
Wang, Z.; Butel, N.; Santos-Gonzalez, J.; Borges, F.; Yi, J.; Martienssen, R. A.; Martinez, G.; Köhler, C.: Polymerase IV Plays a Crucial Role in Pollen Development in Capsella([OPEN]). The Plant Cell 32 (4), pp. 950 - 966 (2020)
24.
Journal Article
Bachmann, J. A.; Tedder, A.; Laenen, B.; Fracassetti, M.; Desamore, A.; Lafon-Placette, C.; Steige, K. A.; Callot, C.; Marande, W.; Neuffer, B. et al.; Berges, H.; Köhler, C.; Castric, V.; Slotte, T.: Genetic basis and timing of a major mating system shift in Capsella. New Phytologist 224 (1), pp. 505 - 517 (2019)
25.
Journal Article
Batista, R. A.; Figueiredo, D.D.; Santos-Gonzalez, J.; Köhler, C.: Auxin regulates endosperm cellularization in Arabidopsis. Genes and Development 33 (7-8), pp. 466 - 476 (2019)
26.
Journal Article
Batista, R. A.; Moreno-Romero, J.; Qiu, Y.; van Boven, J.; Santos-Gonzalez, J.; Figueiredo, D.D.; Köhler, C.: The MADS-box transcription factor PHERES1 controls imprinting in the endosperm by binding to domesticated transposons. eLife 8, e50541 (2019)
27.
Journal Article
Del Toro-De Leon, G.; Köhler, C.: Endosperm-specific transcriptome analysis by applying the INTACT system. Plant Reproduction 32, pp. 55 - 61 (2019)
28.
Journal Article
Moreno-Romero, J.; Del Toro-De Leon, G.; Yadav, V. K.; Santos-Gonzalez, J.; Köhler, C.: Epigenetic signatures associated with imprinted paternally expressed genes in the Arabidopsis endosperm. Genome Biology: Biology for the Post-Genomic Era 20, 41 (2019)
29.
Journal Article
Mozgova, I.; Wildhaber, T.; Trejo-Arellano, M. S.; Fajkus, J.; Roszak, P.; Köhler, C.; Hennig, L.: Transgenerational phenotype aggravation in CAF-1 mutants reveals parent-of-origin specific epigenetic inheritance. New Phytologist 220 (3), pp. 908 - 921 (2018)
30.
Journal Article
Borges, F.; Parent, J.-S.; van Ex, F.; Wolff, P.; Martinez, G.; Köhler, C.; Martienssen, R. A.: Transposon-derived small RNAs triggered by miR845 mediate genome dosage response in Arabidopsis. Nature Genetics 50 (2), pp. 186 - 192 (2018)
31.
Journal Article
Gomez-Zambrano, A.; Crevillen, P.; Franco-Zorrilla, J. M.; Lopez, J. A.; Moreno-Romero, J.; Roszak, P.; Santos-Gonzalez, J.; Jurado, S.; Vazquez, J.; Köhler, C. et al.; Solano, R.; Pineiro, M.; Jarillo, J. A.: Arabidopsis SWC4 Binds DNA and Recruits the SWR1 Complex to Modulate Histone H2A.Z Deposition at Key Regulatory Genes. Molecular Plant 11 (6), pp. 815 - 832 (2018)
32.
Journal Article
Lafon-Placette, C.; Hatorangan, M. R.; Steige, K. A.; Cornille, A.; Lascoux, M.; Slotte, T.; Köhler, C.: Paternally expressed imprinted genes associate with hybridization barriers in Capsella. Nature Plants 4 (6), pp. 352 - 357 (2018)
33.
Journal Article
Martinez, G.; Wolff, P.; Wang, Z.; Moreno-Romero, J.; Santos-Gonzalez, J.; Conze, L. L.; DeFraia, C.; Slotkin, R. K.; Köhler, C.: Paternal easiRNAs regulate parental genome dosage in Arabidopsis. Nature Genetics 50 (2), pp. 193 - 198 (2018)
34.
Journal Article
Nakamura, M.; Köhler, C.; Hennig, L.: Tissue-specific transposon-associated small RNAs in the gymnosperm tree, Norway spruce. BMC Genomics 20 (1), 997 (2018)
35.
Journal Article
Wang, G.; Jiang, H.; de Leon, G. D. T.; Martinez, G.; Köhler, C.: Sequestration of a Transposon-Derived siRNA by a Target Mimic Imprinted Gene Induces Postzygotic Reproductive Isolation in Arabidopsis. Developmental Cell 46 (6), pp. 696 - 705 (2018)
36.
Journal Article
Cabout, S.; Leask, M. P.; Varghese, S.; Yi, J.; Peters, B.; Conze, L. L.; Köhler, C.; Brownfield, L.: The meiotic regulator JASON utilizes alternative translation initiation sites to produce differentially localized forms. Journal of Experimental Botany 68 (15), pp. 4205 - 4217 (2017)
37.
Journal Article
Jiang, H.; Moreno-Romero, J.; Santos-Gonzalez, J.; De Jaeger, G.; Gevaert, K.; Van De Slijke, E.; Köhler, C.: Ectopic application of the repressive histone modification H3K9me2 establishes post-zygotic reproductive isolation in Arabidopsis thaliana. Genes and Development 31 (12), pp. 1272 - 1287 (2017)
38.
Journal Article
Lafon-Placette, C.; Johannessen, I. M.; Hornslien, K. S.; Ali, M. F.; Bjerkan, K. N.; Bramsiepe, J.; Glockle, B. M.; Rebernig, C. A.; Brysting, A. K.; Grini, P. E. et al.; Köhler, C.: Endosperm-based hybridization barriers explain the pattern of gene flow between Arabidopsis lyrata and Arabidopsis arenosa in Central Europe. Proceedings of the National Academy of Sciences of the United States of America 114 (6), pp. E1027 - E1035 (2017)
39.
Journal Article
Moreno-Romero, J.; Santos-Gonzalez, J.; Hennig, L.; Köhler, C.: Applying the INTACT method to purify endosperm nuclei and to generate parental-specific epigenome profiles. Nature Protocols 12 (2), pp. 238 - 254 (2017)
40.
Journal Article
Trejo-Arellano, M. S.; Mahrez, W.; Nakamura, M.; Moreno-Romero, J.; Nanni, P.; Köhler, C.; Hennig, L.: H3K23me1 is an evolutionarily conserved histone modification associated with CG DNA methylation in Arabidopsis. The Plant Journal 90 (2), pp. 293 - 303 (2017)
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