Publications of J. Kopka

Journal Article (211)

201.
Journal Article
Bohmert, K.; Balbo, I.; Kopka, J.; Mittendorf, V.; Nawrath, C.; Poirier, Y.; Tischendorf, G.; Trethewey, R. N.; Willmitzer, L.: Transgenic Arabidopsis plants can accumulate polyhydroxybutyrate to up to 4% of their fresh weight. Planta 211 (6), pp. 841 - 845 (2000)
202.
Journal Article
Fiehn, O.; Kopka, J.; Doermann, P.; Altmann, T.; Trethewey, R. N.; Willmitzer, L.: Metabolite profiling for plant functional genomics. Nature Biotechnology 18 (11), pp. 1157 - 1161 (2000)
203.
Journal Article
Fiehn, O.; Kopka, J.; Trethewey, R. N.; Willmitzer, L.: Identification of uncommon plant metabolites based on calculation of elemental compositions using gas chromatography and quadrupole mass spectrometry. Analytical Chemistry 72 (15), pp. 3573 - 3580 (2000)
204.
Journal Article
Roessner, U.; Wagner, C.; Kopka, J.; Trethewey, R. N.; Willmitzer, L.: Simultaneous analysis of metabolites in potato tuber by gas chromatography-mass spectrometry. Plant Journal 23 (1), pp. 131 - 142 (2000)
205.
Journal Article
Aitken, F. L.; Pical, C.; Mueller-Roeber, B.; Kopka, J.; Gray, J. E.: Phosphoinositide signal transduction in guard cells. Biochemical Society Transactions 26 (4), p. S397 (1998)
206.
Journal Article
Kopka, J.; Pical, C.; Gray, J. E.; Mueller-Roeber, B.: Molecular and enzymatic characterization of three phosphoinositide-specific phospholipase C isoforms from potato. Plant Physiology 116 (1), pp. 239 - 250 (1998)
207.
Journal Article
Kopka, J.; Pical, C.; Hetherington, A. M.; Mueller-Roeber, B.: Ca2+/phospholipid-binding (C-2) domain in multiple plant proteins: novel components of the calcium-sensing apparatus. Plant Molecular Biology 36 (5), pp. 627 - 637 (1998)
208.
Journal Article
Kopka, J.; Ludewig, M.; Mueller-Roeber, B.: Complementary DNAs encoding eukaryotic-type cytidine-5'-diphosphate-diacylglycerol synthases of two plant species. Plant Physiology 113 (3), pp. 997 - 1002 (1997)
209.
Journal Article
Kopka, J.; Provart, N. J.; Mueller-Roeber, B.: Potato guard cells respond to drying soil by a complex change in the expression of genes related to carbon metabolism and turgor regulation. Plant Journal 11 (4), pp. 871 - 882 (1997)
210.
Journal Article
Kopka, J.; Ohlrogge, J. B.; Jaworski, J. G.: Analysis of in-Vivo Levels of Acyl-Thioesters with Gas-Chromatography Mass-Spectrometry of the Butylamide Derivative. Analytical Biochemistry 224 (1), pp. 51 - 60 (1995)
211.
Journal Article
Kopka, J.; Robers, M.; Schuch, R.; Spener, F.: Acyl Carrier Proteins from Developing Seeds of Cuphea-Lanceolata Ait. Planta 191 (1), pp. 102 - 111 (1993)

Book Chapter (21)

212.
Book Chapter
Erban, A.; Martinez-Seidel, F.; Rajarathinam, Y.; Dethloff, F.; Orf, I.; Fehrle, I.; Alpers, J.; Beine-Golovchuk, O.; Kopka, J.: Multiplexed Profiling and Data Processing Methods to Identify Temperature-Regulated Primary Metabolites Using Gas Chromatography Coupled to Mass Spectrometry. In: Plant Cold Acclimation: Methods in molecular biology, Vol. 2156, pp. 203 - 239 (Eds. Hincha, D. K.; Zuther, E.) (2020)
213.
Book Chapter
Vallarino, J. G.; Erban, A.; Fehrle, I.; Fernie, A. R.; Kopka, J.; Osorio, S.: Acquisition of Volatile Compounds by Gas Chromatography–Mass Spectrometry (GC-MS). In: Methods in Molecular Biology, Vol. 1778, pp. 225 - 240 (Ed. António, C.). Humana Press, Clifton, N.J. (2018)
214.
Book Chapter
Watanabe, M.; Tohge, T.; Balazadeh, S.; Erban, A.; Giavalisco, P.; Kopka, J.; Mueller-Roeber, B.; Fernie, A. R.; Hoefgen, R.: Comprehensive Metabolomics Studies of Plant Developmental Senescence. In: Plant Senescence: Methods and Protocols, pp. 339 - 358 (Ed. Guo, Y.). Springer New York, New York, NY (2018)
215.
Book Chapter
Zuther, E.; Lee, Y. P.; Erban, A.; Kopka, J.; Hincha, D. K.: Natural Variation in Freezing Tolerance and Cold Acclimation Response in Arabidopsis thaliana and Related Species. In: Survival Strategies in Extreme Cold and Desiccation: Adaptation Mechanisms and Their Applications, pp. 81 - 98 (Eds. Iwaya-Inoue, M.; Sakurai, M.; Uemura, M.). Springer Singapore, Singapore (2018)
216.
Book Chapter
Dethloff, F.; Erban, A.; Orf, I.; Alpers, J.; Fehrle, I.; Beine-Golovchuk, O.; Schmidt, S.; Schwachtje, J.; Kopka, J.: Profiling Methods to Identify Cold-Regulated Primary Metabolites Using Gas Chromatography Coupled to Mass Spectrometry. In: Plant Cold Acclimation: Methods and Protocols, pp. 171 - 197. HUMANA PRESS INC, 999 RIVERVIEW DR, STE 208, TOTOWA, NJ 07512-1165 USA, 999 RIVERVIEW DR, STE 208, TOTOWA, NJ 07512-1165 USA (2014)
217.
Book Chapter
Huege, J.; Goetze, J.; Dethloff, F.; Junker, B.; Kopka, J.: Quantification of Stable Isotope Label in Metabolites via Mass Spectrometry. In: Plant Chemical Genomics: Methods and Protocols, pp. 213 - 223. HUMANA PRESS INC, 999 RIVERVIEW DR, STE 208, TOTOWA, NJ 07512-1165 USA (2014)
218.
Book Chapter
Huege, J.; Goetze, J.; Dethloff, F.; Junker, B.; Kopka, J.: Quantification of stable isotope label in metabolites via mass spectrometry. In: Methods in Molecular Biology, Vol. 1056, pp. 213 - 223. Humana Press Inc., Totowa, NJ, USA (2012)
219.
Book Chapter
Hummel, J.; Strehmel, N.; Boelling, C.; Schmidt, S.; Walther, D.; Kopka, J.: Mass spectral search and analysis using the Golm Metabolome Database. In: The Handbook of Plant Metabolomics, pp. 321 - 343 (Ed. Weckwerth, W.) (2012)
220.
Book Chapter
Lüdemann, A.; von Malotky, L.; Erban, A.; Kopka, J.: TagFinder: Preprocessing software for the fingerprinting and the profiling of gas chromatography-mass spectrometry based metabolome analyses. In: Methods in Molecular Biology, Vol. 860, pp. 255 - 286 (Eds. Hardy, N. W.; Hall, R. D.). Springer, Berlin (2012)
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