Publications of A. R. Fernie

Gago, J.; Fernie, A. R.; Nikoloski, Z.; Tohge, T.; Martorell, S.; Mariano Escalona, J.; Ribas-Carbo, M.; Flexas, J.; Medrano, H.: Integrative field scale phenotyping for investigating metabolic components of water stress within a vineyard. Plant Methods 13, 90 (2017)

Han, X.; Tohge, T.; Lalor, P.; Dockery, P.; Devaney, N.; Esteves-Ferreira, A. A.; Fernie, A. R.; Sulpice, R.: Phytochrome A and B Regulate Primary Metabolism in Arabidopsis Leaves in Response to Light. Frontiers in Plant Science 8, 1394 (2017)

Ishiga, Y.; Watanabe, M.; Ishiga, T.; Tohge, T.; Matsuura, T.; Ikeda , Y.; Hoefgen, R.; Fernie, A. R.; Mysore, K.S.: The SAL-PAP Chioroplast Retrograde Pathway Contributes to Plant Immunity by Regulating Glucosinolate Pathway and Phytohormone Signaling. Molecular Plant-Microbe Interactions 30 (10), pp. 829 - 841 (2017)

Ishihara, H.; Moraes, T. A.; Pyl, E. T.; Schulze, W. X.; Obata, T.; Scheffel, A.; Fernie, A. R.; Sulpice, R.; Stitt, M.: Growth rate correlates negatively with protein turnover in Arabidopsis accessions. The Plant Journal 91 (3), pp. 416 - 429 (2017)

Jin, M.; Zhang, X.; Zhao, M.; Deng, M.; Du, Y.; Zhou, Y.; Wang, S.; Tohge, T.; Fernie, A. R.; Willmitzer, L. et al.; Brotman, Y.; Yan, J.; Weiwei, W.: Integrated genomics-based mapping reveals the genetics underlying maize flavonoid biosynthesis. BMC Plant Biology 17 (1), 17 (2017)

Joshi, V.; Fernie, A. R.: Citrulline metabolism in plants. Amino Acids 49 (9), pp. 1543 - 1559 (2017)

Kudo, M.; Kidokoro, S.; Yoshida, T.; Mizoi, J.; Todaka, D.; Fernie, A. R.; Shinozaki, K.; Yamaguchi-Shinozaki, K.: Double overexpression of DREB and PIF transcription factors improves drought stress tolerance and cell elongation in transgenic plants. Plant Biotechnology Journal 15 (4), pp. 458 - 471 (2017)

Malinova, I.; Alseekh, S.; Feil, R.; Fernie, A. R.; Baumann, O.; Schöttler, M. A.; Lunn, J. E.; Fettke, J.: Starch synthase 4 and plastidal phosphorylase differentially affect starch granule number and morphology. Plant Physiology 174 (1), pp. 73 - 85 (2017)

Matthijs, M.; Fabris, M.; Obata, T.; Foubert, I.; Franco‐Zorrilla, J. M.; Solano, R.; Fernie, A. R.; Vyverman, W.; Goossens, A.: The transcription factor bZIP14 regulates the TCA cycle in the diatom Phaeodactylum tricornutum. EMBO Journal 36 (8), pp. 959 - 1116 (2017)

Medeiros, D.B.; Barros, K. A.; Barros, J. A. S.; Omena-Garcia, R. P.; Arrivault, S.; Sanglard, L. M. V. P.; Detmann, K. C.; Silva, W. B.; Daloso, D. M.; DaMatta, F. M. et al.; Nunes-Nesi, A.; Fernie, A. R.; Araujo, W. L.: Impaired Malate and Fumarate Accumulation Due to the Mutation of the Tonoplast Dicarboxylate Transporter Has Little Effects on Stomatal Behavior. Plant Physiology 175 (3), pp. 1068 - 1081 (2017)

Menezes-Silva, P. E.; Sanglard, L. M. V. P.; Avila, R. T.; Morais, L. E.; Martins, S. C. V.; Nobres, P.; Patreze, C. M.; Ferreira, M. A.; Araujo, W. L.; Fernie, A. R. et al.; DaMatta, F. M.: Photosynthetic and metabolic acclimation to repeated drought events play key roles in drought tolerance in coffee. Journal of Experimental Botany 68 (15), pp. 4309 - 4322 (2017)

Modde, K.; Timm, S.; Florian, A.; Michl, K.; Fernie, A. R.; Bauwe, a. H.: High serine:glyoxylate aminotransferase activity lowers leaf daytime serine levels, inducing the phosphoserine pathway in Arabidopsis. Journal of Experimental Botany 68 (3), pp. 643 - 656 (2017)

Nelson, D. R.; Khraiwesh, B.; Fu, W.; Alseekh, S.; Jaiswal, A.; Chaiboonchoe, A.; Hazzouri, K. M.; O'Connor, M. J.; Butterfoss, G. L.; Drou, N. et al.; Rowe, J. D.; Harb, J.; Fernie, A. R.; Gunsalus, K. C.; Salehi-Ashtiani, K.: The genome and phenome of the green alga Chloroidium sp. UTEX 3007 reveal adaptive traits for desert acclimatization. eLife 6, e25783 (2017)

Obata, T.; Rosado-Souza, L.; Fernie, A. R.: Coupling Radiotracer Experiments with Chemical Fractionation for the Estimation of Respiratory Fluxes. Plant Respiration and Internal Oxygen: Methods and Protocols, pp. 17 - 30 (2017)

Omena-Garcia, R. P.; Araujo, W. L.; Gibon, Y.; Fernie, A. R.; Nunes-Nesi, A.: Measurement of Tricarboxylic Acid Cycle Enzyme Activities in Plants. Plant Respiration and Internal Oxygen: Methods and Protocols, pp. 167 - 182 (2017)

Peng, M.; Shahzad, R.; Gul, A.; Subthain, H.; Shen, S.; Lei, L.; Zheng, Z.; Zhou, J.; Lu, D.; Wang, S. et al.; Nishawy, E.; Liu, X.; Tohge, T.; Fernie, A. R.; Luo, J.: Differentially evolved glucosyltransferases determine natural variation of rice flavone accumulation and UV-tolerance. Nature Communications 8, 1975 (2017)

Poplawski, P.; Tohge, T.; Boguslawska, J.; Rybicka, B.; Tanski, Z.; Trevino, V.; Fernie, A. R.; Piekielko-Witkowska, A.: Integrated transcriptomic and metabolomic analysis shows that disturbances in metabolism of tumor cells contribute to poor survival of RCC patients. Biochimica et Biophysica Acta (BBA) - Molecular Basis of Disease 1863 (3), pp. 744 - 752 (2017)

Robaina-Estévez, S.; Daloso, D. M.; Zhang, Y.; Fernie, A. R.; Nikoloski, Z.: Resolving the central metabolism of Arabidopsis guard cells. Scientific Reports 7, 8307 (2017)

Romero-Munar, A.; Del-Saz, N. F.; Ribas-Carbó, M.; Flexas, J.; Baraza, E.; Florez-Sarasa, I. D.; Fernie, A. R.; Gulías, J.: Arbuscular mycorrhizal symbiosis with Arundo donax decreases root respiration and increases both photosynthesis and plant biomass accumulation. Plant Cell Environment 40 (7), pp. 1115 - 1126 (2017)

Ru, L.; Osorio, S.; Wang, L.; Fernie, A. R.; Patrick, J.W.; Ruan, Y.-L.: Transcriptomic and metabolomics responses to elevated cell wall invertase activity during tomato fruit set. Journal of Experimental Botany 68 (15), pp. 4263 - 4279 (2017)