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Liu, F.; Zhao, Z.; Fernie, A. R.; Zhang, Y.: Towards establishing functional nitrogenase activities within plants. Trends in Biotechnology (2025)

Cao, Y.; Chen, Q.; Xu, X.; Fernie, A. R.; Li, J.; Zhang, Y.: Insights from natural rubber biosynthesis evolution for pathway engineering. Trends in Plant Science (2025)

Fettke, J.; Fernie, A. R.: Do storage reserves contribute to plant phenotypic plasticity? Trends in Plant Science 30 (4), pp. 364 - 372 (2025)

Nievergelt, A. P.: Genome editing in the green alga Chlamydomonas: past, present practice and future prospects. The Plant Journal 122 (1), e70140 (2025)

Qin, K.; Ye, X.; Luo, S.; Fernie, A. R.; Zhang, Y.: Engineering carbon assimilation in plants. Journal of Integrative Plant Biology 67 (4), pp. 926 - 948 (2025)

Arend, M.; Paulitz, E.; Hsieh, Y.; Nikoloski, Z.: Scaling metabolic model reconstruction up to the pan-genome level: A systematic review and prospective applications to photosynthetic organisms. Metabolic Engineering 90, pp. 67 - 77 (2025)

Bulut, M.; Karakas, E.; Fernie, A. R.: Metabolic responses to multi-stress: An update. Plant Stress 15, 100729 (2025)

Bulut, M.; Karakas, E.; Fernie, A. R.: Adjustments of plant primary metabolism in the face of climate change. Journal of Experimental Botany, eraf116 (2025)

de Oliveira, H.O.; Siqueira, J.A.; Medeiros, D.B.; Fernie, A. R.; Nunes-Nesi, A.; Araújo, W.L.: Harnessing the dynamics of plant organic acids metabolism following abiotic stresses. Plant Physiology and Biochemistry 220, 109465 (2025)

Jahan, T.; Huda, M.N.; Zhang, K.; He, Y.; Lai, D.; Dhami, N.; Quinet, M.; Ali, M.A.; Kreft, I.; Woo, S.-H. et al.; Georgiev, M.I.; Fernie, A. R.; Zhou, M.: Plant secondary metabolites against biotic stresses for sustainable crop protection. Biotechnology Advances 79, 108520 (2025)

Marzban, N.; Psarianos, M.; Herrmann, C.; Schulz-Nielsen, L.; Olszewska-Widdrat, A.; Arefi, A.; Pecenka, R.; Grundmann, P.; Schlüter, O. K.; Hoffmann, T. et al.; Rotter, V. S.; Nikoloski, Z.; Sturm, B.: Smart integrated biorefineries in bioeconomy: A concept toward zero-waste, emission reduction, and self-sufficient energy production. Biofuel Research Journal 12 (1), pp. 2319 - 2349 (2025)

Zhao, Z.; Fernie, A. R.; Zhang, Y.: Engineering nitrogen and carbon fixation for next-generation plants. Current Opinion in Plant Biology 85, 102699 (2025)

Liu, H.-J.; Liu, J.; Zhai, Z.; Dai, M.; Tian, F.; Wu, Y.; Tang, J.; Lu, Y.; Wang, H.; Jackson, D. et al.; Yang, X.; Qin, F.; Xu, M.; Fernie, A. R.; Zhang, Z.; Yan, J.: Maize2035: A decadal vision for intelligent maize breeding. Molecular Plant 18 (2), pp. 313 - 332 (2025)

Petersen, M.; Avin-Wittenberg, T.; Bassham, D. C.; Dagdas, Y.; Fan, C.; Fernie, A. R.; Jiang, L.; Mishra, D.; Otegui, M. S.; Rodriguez, E. et al.; Hofius, D.: Autophagy in plants. Autophagy Reports 3 (1), 2395731 (2024)

Sartagoda, K.J.D.; Tiozon, R. J. N.; Sreenivasulu, N.: Cereal-based proteins: Bridging health, sustainability, and future innovations for food industries. Journal of Food Composition and Analysis 136, 106720 (2024)

Ye, X.; Qin, K.; Fernie, A. R.; Zhang, Y.: Prospects for synthetic biology in 21st Century agriculture. International Journal of Genetics and Genomics (2024)

de Vries, J.; de Vries, S.; Fernie, A. R.: Current and future perspectives for enhancing our understanding of the evolution of plant metabolism. Philosophical Transactions B 379 (1914), 20240253 (2024)

Delaux, P.; Gutjahr, C.: Evolution of small molecule-mediated regulation of arbuscular mycorrhiza symbiosis. Philosophical Transactions B 379 (1914), 20230369 (2024)

Fernie, A. R.; de Vries, S.; de Vries, J.: Evolution of plant metabolism: the state-of-the-art. Philosophical Transactions of the Royal Society of London, Series B: Biological Sciences 379 (1914), 20230347 (2024)

Fernie, A. R.; Liu, F.; Zhang, Y.: Post-genomic illumination of paclitaxel biosynthesis. Nature Plants 10, pp. 1875 - 1885 (2024)