Publications of A. R. Fernie

El-Shiekh, R. A., Elshimy, R., Mandour, A. A., Kassem, H. A. H., Khaleel, A. E., Alseekh, S., Fernie, A. R. & Salem, M. A. Murraya koenigii (L.) Sprengel seeds and pericarps in relation to their chemical profiles: new approach for multidrug resistant Acinetobacterbaumannii ventilator-associated pneumonia. Applied Biological Chemistry 67, (2024).

Fernie, A. R. & Bulut, M. A delicate balance: transcriptional control of awn development and yield in barley. Trends in Plant Science 29, 946–947 (2024).

Gupta, S., Petrov, V., Garg, V., Mueller-Roeber, B., Fernie, A. R., Nikoloski, Z. & Gechev, T. The genome of Haberlea rhodopensis provides insights into the mechanisms for tolerance to multiple extreme environments. Cellular and Molecular Life Sciences 81, (2024).

Martinez Rivas, F. J., Fernie, A. R. & Aarabi, F. Roles and Regulation of the RBOHD Enzyme in Initiating ROS-Mediated Systemic Signaling During Biotic and Abiotic Stress. Plant Stress 11, (2024).

Naake, T., Zhu, F., Alseekh, S., Scossa, F., de Souza, L. P., Borghi, M., Brotman, Y., Mori, T., Nakabayashi, R., Tohge, T. & Fernie, A. R. Genome-wide association studies identify loci controlling specialized seed metabolites in Arabidopsis. Plant Physiology 194, 1705–1721 (2024).

Timm, S., Klaas, N., Niemann, J., Jahnke, K., Alseekh, S., Zhang, Y. J., Souza, P. V. L., Hou, L.-Y., Cosse, M., Selinski, J., Geigenberger, P., Daloso, D. M., Fernie, A. R. & Hagemann, M. Thioredoxins o1 and h2 jointly adjust mitochondrial dihydrolipoamide dehydrogenase-dependent pathways towards changing environments. Plant, Cell and Environment 47, 2542–2560 (2024).

Wang, H., Li, L., Ma, L., Fernie, A. R., Fu, A., Bai, C., Sang, Z., Guo, S., Zhang, F., Wang, Q., Zheng, Y. & Zuo, J. Revealing the specific regulations of nitric oxide on the postharvest ripening and senescence of bitter melon fruit. aBIOTECH 5, 29–45 (2024).

Zhu, A., Liu, M., Tian, Z., Liu, W., Hu, X., Ao, M., Jia, J., Shi, T., Liu, H., Li, D., Mao, H., Su, H., Yan, W., Li, Q., Lan, C., Fernie, A. R. & Chen, W. Chemical-tag-based semi-annotated metabolomics facilitates gene identification and specialized metabolic pathway elucidation in wheat. The Plant Cell 36, 540–558 (2024).

He, Y., Zhang, K., Shi, Y., Lin, H., Huang, X., Lu, X., Wang, Z., Li, W., Feng, X., Shi, T., Chen, Q., Wang, J., Tang, Y., Chapman, M. A., Germ, M., Luthar, Z., Kreft, I., Janovská, D., Meglič, V., Woo, S.-H., Quinet, M., Fernie, A. R., Liu, X. & Zhou, M. Genomic insight into the origin, domestication, dispersal, diversification and human selection of Tartary buckwheat. Genome Biology: Biology for the Post-Genomic Era 25, (2024).

Borghi, M., Pacifico, D., Crucitti, D., Squartini, A., Berger, M. M. J., Gamboni, M., Carimi, F., Lehad, A., Costa, A., Gallusci, P., Fernie, A. R. & Zottini, M. Smart selection of soil microbes for resilient and sustainable viticulture. The Plant Journal 118, 1258–1267 (2024).

Boutoub, O., Jadhav, S., Zheng, X., El Ghadraoui, L., Al Babili, S., Fernie, A. R., Figueiredo, A. C., Miguel, M. G. & Borghi, M. Biochemical characterization of Euphorbia resinifera floral cyathia. Journal of Plant Physiology 293, (2024).

Dziubek, D., Poeker, L., Siemiatkowska, B., Graf, A., Marino, G., Alseekh, S., Arrivault, S., Fernie, A. R., Armbruster, U. & Geigenberger, P. NTRC and thioredoxins m1/m2 underpin the light acclimation of plants on proteome and metabolome levels. Plant Physiology 194, 982–1005 (2024).

Elbanna, A. H., Abdelghany, S., Alseekh, S., Fernie, A. R. & Farag, M. A. Seasonal and taxa impact on edible sea cucumber metabolome as analyzed via a multiplex approach of mass spectroscopy-based metabolomics. Food Bioscience 57, (2024).

Fuchs, P., Feixes-Prats, E., Arruda, P., Feitosa-Araújo, E., Fernie, A. R., Grefen, C., Lichtenauer, S., Linka, N., de Godoy Maia, I., Meyer, A. J., Schilasky, S., Sweetlove, L. J., Wege, S., Weber, A. P. M., Millar, A. H., Keech, O., Florez-Sarasa, I., Barreto, P. & Schwarzländer, M. PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 2 localizes to the Golgi. Plant Physiology 194, 623–628 (2024).

Pereira, A. M., Martins, A. O., Batista-Silva, W., Condori-Apfata, J. A., Silva, V. F., Oliveira, L. A., Andrade, E. S., Martins, S. C. V., Medeiros, D. B., Nascimento, V. L., Fernie, A. R., Nunes-Nesi, A. & Araújo, W. L. Differential content of leaf and fruit pigment in tomatoes culminate in a complex metabolic reprogramming without growth impacts. Journal of Plant Physiology 293, (2024).

Rosa-Téllez, S., Alcántara-Enguídanos, A., Martinez-Seidel, F., Casatejada-Anchel, R., Saeheng, S., Bailes, C. L., Erban, A., Medeiros, D. B., Alepúz, P., Matus, J. T., Kopka, J., Muñoz-Bertomeu, J., Krueger, S., Roje, S., Fernie, A. R. & Ros, R. The serine-glycine-one carbon metabolic network orchestrates changes in nitrogen and sulfur metabolism and shapes plant development. The Plant Cell 36, 404–426 (2024).

Sun, Y., Zhou, Y., Long, Q., Xing, J., Guo, P., Liu, Y., Zhang, C., Zhang, Y., Fernie, A. R., Shi, Y., Luo, Y., Luo, J. & Jin, C. OsBCAT2, a gene responsible for the degradation of branched-chain amino acids, positively regulates salt tolerance by promoting the synthesis of vitamin B5. New Phytologist 241, 2558–2574 (2024).

Carreno-Quintero, N., Tohge, T., Van Acker, R., McKee, L. S., Zhou, Q., Bolze, A., Xing, X., Özparpucu, M., Rüggeberg, M., Piofczyk, T., Koram, Y., Bulone, V., Boerjan, W., Fernie, A. R. & Fraser, P. D. Non-targeted discovery of high-value bio-products in Nicotiana glauca L: a potential renewable plant feedstock. Bioresources and Bioprocessing 11, (2024).

Liu, N., Du, Y., Yan, S., Chen, W., Deng, M., Xu, S., Wang, H., Zhan, W., Huang, W., Yin, Y., Yang, X., Zhao, Q., Fernie, A. R. & Yan, J. The light and hypoxia induced gene ZmPORB1 determines tocopherol content in the maize kernel. Science China Life Sciences 67, 435–448 (2024).

Daubermann, A. G., Lima, V. F., Erban, A., Kopka, J., Fernie, A. R., Schwarzländer, M., dos Anjos, L. & Daloso, D. M. Novel guard cell sink characteristics revealed by a multi-species/cell-types meta-analysis of 13C-labelling experiments. Theoretical and Experimental Plant Physiology (2024). doi:10.1007/s40626-023-00299-9