Publikationen von Claudia Köhler

Peer-reviewed articles

  • Dziasek K, Simon L, Lafon Placette C, Laenen B, Wärdig C, Santos-González J, Slotte T, Köhler C (2021) Hybrid seed incompatibility in Capsella is connected to chromatin condensation defects in the endosperm. PLoS Genetics (in press)
  • Dvořák Tomaštíková E, Hafrén A, Trejo-Arellano M, Rasmussen RS, Sato H, Santos-González H, Köhler C, Hennig L, Hofius D (2021) Polycomb Repressive Complex 2 and KRYPTONITE regulate pathogen-induced programmed cell death in Arabidopsis. Plant Physiology (in press)
  • Köhler C, Dziasek K, Del Toro-De León G (2021) Postzygotic reproductive isolation established in the endosperm: Mechanisms, drivers and relevance. Phil. Trans. R. Soc. B. (in press)
  • Liu  L, de Jonge  J , Trejo-Arellano  MS , Santos-González  J , Köhler  C , Hennig  H (2020) Role of H1 and DNA methylation in selective regulation of transposable elements during heat stress. New Phytol. doi: 10.1111/nph.17018.
  • Nakamura M, Batista RA, Köhler C, Hennig H (2020) PRC2-mediated H3K27me3 associates with embryogenic potential of Norway spruce. J Exp Bot doi: 10.1093/jxb/eraa365.
  • Qiu Y, Köhler C (2020) Mobility connects: transposable elements wire new transcriptional networks by transferring transcription factor binding motifs. Biochem Soc Trans. 48:1005-1017. doi: 10.1042/BST20190937.
  • Kralemann LEM, Liu S, Trejo-Arellano MS, Muñoz-Viana R, Köhler C, Hennig L (2020) Removal of H2Aub1 by ubiquitin-specific proteases 12 and 13 is required for stable Polycomb-mediated gene repression in Arabidopsis. Genome Biol. 21: 144. doi: 10.1186/s13059-020-02062-8.
  • Wang Z, Butel N, Santos-González J, Borges  F, Yi J, Martienssen M, Martinez G, Köhler C (2020). Polymerase IV Plays a Crucial Role in Pollen Development in Capsella. Plant Cell doi:10.1105/tpc.19.00938.
  • Nakamura M, Köhler C, Hennig L (2019) Tissue-specific transposon-associated small RNAs in the gymnosperm tree, Norway spruce. BMC Genomics 20:997
  • Batista RA, Moreno-Romero J, Qiu Y, van Boven J, Santos-González J, Figueiredo DD, Köhler C (2019) The MADS-box transcription factor PHERES1 controls imprinting in the endosperm by binding to domesticated transposons. Elife. doi: 10.7554/eLife.50541.
  • Trejo-Arellano MS, Mehdi S, de Jonge J, Dvorák Tomastíková E, Köhler C, Hennig L (2019) Dark-induced senescence causes localized changes in DNA methylation. Plant Physiol. doi: 10.1104/pp.19.01154.
  • Bachmann JA, Tedder A, Laenen B, Fracassetti M, Désamoré A, Lafon-Placette C, Steige KA, Callot C, Marande W, Neuffer B, Bergès H, Köhler C, Castric V, Slotte T. (2019) Genetic basis and timing of a major mating system shift in Capsella. New Phytol. 224:505-517.
  • Batista RA, Figueiredo DD, Santos-González J, Köhler C (2019) Auxin regulates endosperm cellularization in Arabidopsis. Genes & Development, 33:466-476.
  • Moreno-Romero J, Del Toro-De León G, Kumar Yadav V, Santos-González J, Köhler C (2019) Epigenetic signatures associated with imprinted paternally-expressed genes in the Arabidopsis endosperm. Genome Biology, 20:41.
  • Del Toro-De León G, Köhler C. (2019) Endosperm-specific transcriptome analysis by applying the INTACT system. Plant Reprod. 32:55-61.
  • Wang G, Jiang H, Del Toro de León G, Martinez G, Köhler C (2018) Sequestration of a transposon-derived siRNA by a target mimic imprinted gene induces postzygotic reproductive isolation in Arabidopsis. Developmental Cell 46: 1-10.
  • Lafon-Placette C, Hatorangan MR, Steige  KA, Cornille A, Lascoux M, Slotte T, Köhler C (2018) Paternally expressed imprinted genes associate with hybridization barriers in Capsella. Nature Plant 4:352-357.
  • Mozgova I, Wildhaber T, Trejo-Arellano MS, Fajkus J, Roszak P, Köhler C, Hennig L (2018) Transgenerational phenotype aggravation in CAF-1 mutants reveals parent-of-origin specific epigenetic inheritance. New Phytol. 220:908-921.
  • Martinez G, Wolff P, Wang Z, Moreno-Romero J, Santos-Gonzalez J, Liu Conze L, DeFraia C, Slotkin KR, Köhler C (2018) Paternal easiRNAs regulate parental genome dosage in Arabidopsis. Nature Genetics 50:193-198.
  • Borges F, Parent J-S, van Ex F, Wolff P, Martinez G, Köhler C, Martienssen RA (2018) microRNA-triggered transposon small RNAs mediate genome dosage response. Nature Genetics 50:186-192.
  • Gómez-Zambrano Á, Crevillén P, Franco-Zorrilla JM, López JA, Moreno-Romero J, Roszak P, Santos-González J, Jurado S, Vázquez J, Köhler C, Solano R, Piñeiro M, Jarillo JA. (2018) Arabidopsis SWC4 Binds DNA and Recruits the SWR1 Complex to Modulate Histone H2A.Z Deposition at Key Regulatory Genes. Mol Plant. 11:815-832.
  • Jiang H, Moreno-Romero J, Santos-González J, De Jaeger G, Gevaert K, Van De Slijke E, Köhler C (2017) Ectopic application of the repressive histone modification H3K9me2 establishes postzygotic reproductive isolation in Arabidopsis thaliana. Genes and Dev., 31: 1272-1287.
  • Cabout S, Leask MP, Varghese S, Yi J, Peters B, Liu Conze L, Köhler C, Brownfield L (2017) The Meiotic Regulator JASON Utilizes Alternative Translation Initiation Sites to Produce Differentially Localized Forms. J. Exp. Bot. 68: 4205–4217.
  • Trejo-Arellano MS, Mahrez W, Nakamura M, Moreno-Romero J, Nanni P, Köhler C, Hennig L. (2017) H3K23me1 is an evolutionary conserved histone modification associated with CG DNA methylation in Arabidopsis. Plant J. 90: 293-303.
  • Lafon-Placette C, Johannessen IM, Hornslien KS, Ali MF, Bjerkan KN, Bramsiepe J, Glöckle BM, Rebernig CA, Brysting AK, Grini PE, Köhler C. (2017) Endosperm-based hybridization barriers explain the pattern of gene flow between Arabidopsis lyrata and Arabidopsis arenosa in Central Europe. PNAS, 114: E1027-E1035.
  • Moreno-Romero J, Santos-Gonzàlez J, Hennig L, Köhler C.  (2017) Applying the INTACT method to purify endosperm nuclei and to generate parental-specific epigenome profiles. Nature Protocols, 12:238-254.
  • Figueiredo DD, Batista RA, Roszak PJ, Hennig, L, Köhler C. (2016) Auxin production in the endosperm drives seed coat development in Arabidopsis. eLIFE: e20542.
  • Castellano M, Martinez G, Marques MC, Moreno-Romero J, Köhler C, Pallas V, Gomez G. (2016) Changes in the DNA methylation pattern of the host male gametophyte of viroid-infected cucumber plants. J. Exp. Bot. 67:5857-5868.
  • Derkacheva M, Liu S, Figueiredo DD, Gentry M, Mozgova I, Nanni P, Tang M, Mannervik M, Köhler C, Hennig L. (2016) H2A deubiquitinases UBP12/13 are part of the Arabidopsis polycomb group protein system Nature Plants 2:16126.
  • Hatorangan MR, Laenen B, Steige K, Slotte T, Köhler C (2016) Rapid Evolution of Genomic Imprinting in Two Species of the Brassicaceae. Plant Cell 8:1815-27.
  • Moreno-Romero J, Liang H, Santos-Gonzàlez J, Köhler C (2016) Parental epigenetic asymmetry of PRC2-mediated histone modifications in the Arabidopsis endosperm. EMBO J. 35:1298-311.
  • Martínez G,  Panda K, Köhler C, Slotkin RK (2016) Silencing in sperm cells is directed by RNA movement from the surrounding nurse cell.  Nature Plants 2: 16030.
  • Mahrez W, Trejo Arellano MS, Moreno-Romero J, Nakamura M, Shu H, Nanni P, Köhler C, Gruissem W, Hennig L. (2016) H3K36ac is an evolutionary conserved plant histone modification that marks active genes. Plant Physiol. 170:1566-77.
  • Mahrez W, Shin J, Muñoz-Viana R, Figueiredo DD, Trejo-Arellano MS, Exner V, Siretskiy A, Gruissem W, Köhler C, Hennig L. (2016) BRR2a affects flowering time via FLC splicing. PLoS Genet 12 (4), e1005924.
  • Figueiredo DD, Batista RA, Roszak PJ, Köhler C (2015) Auxin production couples endosperm development to fertilization. Nature Plants 1: 15184.
  • Jiang H, Yi J, Boavida LC, Chen Y, Becker JD, Köhler C, McCormick S.(2015)  Intercellular communication in Arabidopsis thaliana pollen discovered via AHG3 transcript movement from the vegetative cell to sperm. PNAS 112:13378-83.
  • Wolff P, Jiang H, Wang G, Santos-Gonzàlez J, Köhler C (2015) Paternally expressed imprinted genes establish postzygotic hybridization barriers in Arabidopsis thaliana. eLife 10074.
  • Rebernig CA, Lafon-Placette C, Hatorangan MR, Slotte T, Köhler C (2015) Non-reciprocal Interspecies Hybridization Barriers in the Capsella Genus are Established in the Endosperm. PLoS Genet. e1005295.
  • Brownfield L., Yi J., Jiang H., Minina E.A., Twell D., Köhler C. (2015) Organelles maintain spindle position in plant meiosis. Nature Comm. 6: 6492.
  • Schoft V.K., Chumak N., Bindics J., Slusarz L., Twell D., Köhler C., Tamaru H. (2015) SYBR Green-activated sorting of Arabidopsis pollen nuclei based on different DNA/RNA content. Plant Reprod. 28: 61-72.
  • Schatlowski, N., Wolff, P., Santos-González, J., Schoft, V., Siretskiy, A., Scott, R., Tamaru, H., Köhler, C. (2014) Hypomethylated Pollen Bypasses the Interploidy Hybridization Barrier in Arabidopsis. Plant Cell 9:3556-68.
  • Rodríguez-Sanz, H., Moreno-Romero, J., Solís, M.T., Köhler, C., Risueño, M.C., Testillano, P.S. (2014) Changes in histone methylation and acetylation during microspore reprogramming to embryogenesis occur concomitantly with Bn HKMT and Bn HAT expression and are associated with cell totipotency, proliferation, and differentiation in Brassica napus. Cytogenet Genome Res. 143:209-18.
  • Kradolfer, D., Wolff, P., Jiang, H., Siretskiy, A., Köhler, C. (2013) An imprinted gene underlies postzygotic reproductive isolation in Arabidopsis thaliana. Dev. Cell 26: 525-35.
  • Kradolfer D., Hennig, L., Köhler, C. (2013) Increased Maternal Genome Dosage Bypasses the Requirement of the FIS Polycomb Repressive Complex 2 in Arabidopsis Seed Development. PLoS Genetics, 9:e1003163.
  • Hehenberger, E., Kradolfer, K., Köhler, C. (2012) Endosperm Cellularization Defines an Important Developmental Transition for Embryo Development. Development, 139: 2031-203.Köhler, C. and Neuhaus, G. (1998) Cloning and partial characterization of two putative cyclic nucleotide-regulated ion channels from Arabidopsis thaliana, designated CNGC1 and CNGC2. Plant Physiol. 116: 1604.
  • Oono, Y., Chen, Q.G., Overvoorde, P.J., Köhler, C. and Theologis, A. (1998) Age mutants of Arabidopsis exhibit altered auxin-regulated gene expression. Plant Cell 10: 1649-1662.
  • Liang, X., Oono, Y., Shen, N.F., Köhler, C., Li, K., Scolnik, P.A., Theologis, A. (1995) Characterization of two members (ACS1 and ACS3) of the 1-aminocyclopropane-1-carboxylatesynthase gene family of Arabidopsis thaliana. Gene 167: 17-24.
  • Roszak, P., Köhler, C. (2011) Polycomb group proteins are required to couple seed coat initiation to fertilization. PNAS 108: 20826-20831.
  • McKeown, P.C., Laouielle-Duprat, S., Prins, P., Wolff, P., Schmid, M.W., Donoghue, M.T., Fort, A., Duszynska, D., Comte, A., Lao, N.T., Wennblom, T.J., Smant, G., Köhler, C., Grossniklaus, U., Spillane, C. (2011) Identification of imprinted genes subject to parent-of-origin specific expression in Arabidopsis thaliana seeds. BMC Plant Biol.:11, 113.
  • Wolff, P., Weinhofer, I., Sequin, P., Roszak, P. Beisel, C, Donoghue, M., Spillane, C., Nordborg, M, Rehmsmeier, M., Köhler, C. (2011) High-Resolution Analysis of Parent-of-Origin Allelic Expression in the Arabidopsis Endosperm. PLoS Genetics 7: e1002126.
  • Aichinger, E., Villar, C.B., Di Mambro, R., Sabatini, S., Köhler, C. (2011) The CHD3 Chromatin Remodeler PICKLE and Polycomb Group Proteins Antagonistically Regulate Meristem Activity in the Arabidopsis Root. Plant Cell 23:1047-1060.
  • Egli, B., Kölling, K., Köhler, C., Zeeman, S.C., Streb, S. (2010) Cytosolic phosphoglucomutase is required for gametophyte development in Arabidopsis. Plant Physiol. 154:1659-1671.
  • Weinhofer, I., Hehenberger, E., Roszak, P., Hennig, L., Köhler, C. (2010) H3K27me3 Profiling of the Endosperm Implies Exclusion of Polycomb group Protein Targeting by DNA Methylation. PLoS Genet. 6: e1001152.
  • Erilova, E., Brownfield, L., Exner, V., Rosa, M., Twell, D., Mittelsten Scheid, O., Hennig, L., Köhler, C. (2009) Imprinting of the Polycomb Group Gene MEDEA Serves as a Ploidy Sensor in Arabidopsis. PLoS Genetics 5:e1000663.
  • Aichinger, E., Villar, C.B.R., Farrona, S., Reyes, J.C., Hennig, L., Köhler, C. (2009) CHD3 proteins and Polycomb group proteins antagonistically determine cell identity in Arabidopsis. PLoS Genetics 8:e1000605.
  • Exner, V., Aichinger, E., Shu, H., Wildhaber, T., Alfarano, P., Caflisch, A., Gruissem, W., Köhler, C., Hennig, L. (2009) The chromodomain of LIKE HETEROCHROMATIN PROTEIN 1 is essential for H3K27me3 binding and function during Arabidopsis development. PLoS ONE 4:e5335.
  • Villar, B.R., Erilova, A., Makarevich, G., Trösch, R., Köhler, C. (2009) Control of PHERES1 imprinting in Arabidopsis by direct tandem repeats. Mol. Plant 2: 654-660.
  • Makarevich, G., Villar, C.B.R., Erilova, A., Köhler, C. (2008) Mechanism of PHERES1 imprinting in Arabidopsis. J. Cell Science, 121: 906-912.
  • Leroy, O, Hennig, L, Breuninger, H, Laux, T, Köhler, C (2007) Polycomb group proteins function in the female gametophyte to determine seed development in plants. Development 134:3639-3648.
  • Schönrock N., Bouveret R., Leroy O. Borghi L., Köhler C., Gruissem W., Hennig L. (2006) Polycomb-group proteins repress the floral activator AGL19 in the FLC-independent vernalization pathway. Genes Dev. 20:1667-78.
  • Makarevich, G., Leroy, O., Akinci, U., Schubert, D., Clarenz, O., Goodrich, J., Grossniklaus, U., Köhler, C. (2006) Different Polycomb group complexes regulate common target genes in Arabidopsis. EMBO Rep. 79: 947-952.
  • Köhler, C., Page, D.R., Gagliardini-Fankhauser, V., Grossniklaus, U. (2005) The Arabidopsis MEDEA PcG protein controls expression of PHERES1 by parental imprinting. Nature Genet. 37:28-30.
  • Collinge, M., Spillane, C., Köhler, C., Gheyselinck, J., Grossniklaus U. (2004) Genetic interaction of an origin recognition complex subunit and the Polycomb group protein MEDEA from Arabidopsis. Plant Cell 16: 1035-1046.
  • Page, D.R., Köhler, C., Costa Nunes, J., Baroux, C., Grossniklaus, U. (2004) Intrachromosomal excisition of a hybrid DS element causes large genomic deletions in Arabidopsis. PNAS 101: 2969-2974.
  • Hennig, L., Gruissem, W., Grossniklaus, U. Köhler, C. (2004) Transcriptional programs of plant reproduction. Plant Physiol. 135: 1765-1775.
  • Köhler, C., Hennig, L., Bouveret, R., Gheyselinck, J., Grossniklaus, U. Gruissem, W. (2003). AtMSI1 is a component of an Arabidopsis PcG complex and essential for seed development. EMBO J. 22: 4804-4814.
  • Köhler, C., Hennig, L., Spillane, C., Pien, S., Gruissem, W., Grossniklaus, U. (2003). The Polycomb group protein MEDEA regulates seed development by controlling expression of the MADS-box gene PHERES1. Genes Dev. 17, 1540-1553.
  • Balague, C., Lin, B., Alcon, C., Flottes, G., Malmstrom, S., Köhler, C., Neuhaus, G., Pelletier, G., Gaymard, F., Roby, D. (2003). HLM1, an essential signaling component in the hypersensitive response, is a member of the cyclic nucleotide-gated ion channel family. Plant Cell 15: 365-379.
  • Köhler, C., Merkle, T., Roby, D., Neuhaus, G. (2001). Developmentally regulated expression of a cyclic nucleotide-gated ion channel from Arabidopsis indicates its involvement in programmed cell death. Planta 213: 327-332.
  • Spillane, C., MacDougall, C., Stock, C., Köhler, C., Vielle-Calzada, J-P., Nunes, S.M., Grossniklaus, U., Goodrich, J. (2000) Interaction of the Arabidopsis Polycomb group proteins FIE and MEA mediates their common phenotypes. Curr. Biol. 10: 1535-1538.
  • Köhler, C., Neuhaus, G. (2000) Characterisation of calmodulin binding to cyclic nucleotide-gated ion channels from Arabidopsis thaliana. FEBS Lett. 471: 133-136.
  • Haasen, D., Köhler, C., Neuhaus, G., Merkle, T. (1999) Nuclear export of proteins in plants: AtXPO1 is the export receptor for leucine-rich nuclear export signals in Arabidopsis thaliana. Plant J. 20: 695-705.
  • Köhler, C., Merkle, T., Neuhaus, G. (1999) Characterisation of a novel gene family of putative cyclic nucleotide- and calmodulin-regulated ion channels in Arabidopsis thaliana. Plant J. 18: 97-104.

 

Review articles

  • Batista RA, Köhler C (2020). Genomic imprinting in plants-revisiting existing models." Genes & Development: 24-36.
  • Figueiredo DD, Köhler C (2018) Auxin: a molecular trigger of seed development. Genes & Development 32:479-490.
  • Wang G, Köhler C (2017) Epigenetic processes in flowering plant reproduction. J Exp Bot., 68:797-807.
  • Martinez G, Köhler C (2017) Role of small RNAs in epigenetic reprogramming during plant sexual reproduction. Curr Opin Plant Biol 36: 22–28.
  • Lafon-Placette C, Köhler C. (2016) Endosperm-based postzygotic hybridization barriers: developmental mechanisms and evolutionary drivers. Mol Ecol. 25:2620-9.
  • Lafon-Placette C, Vallejo-Marín M, Parisod C, Abbott RJ, Köhler C. (2016) Current plant speciation research: unravelling the processes and mechanisms behind the evolution of reproductive isolation barriers. New Phytol. 209:29-33.
  • Figueiredo, D.D., Köhler, C. (2016) Bridging the generation gap: Communication between maternal sporophyte, female gametophyte and fertilization products. Curr Opin Plant Biol 29: 16-20.
  • Mozgová I, Köhler C, Gaudin V, Hennig L. (2015) The many faces of plant chromatin: Meeting summary of the 4th European workshop on plant chromatin 2015, Uppsala, Sweden. Epigenetics. 10:1084-90.
  • Köhler C., Lafon-Placette C. (2015) Evolution and function of epigenetic processes in the endosperm. Front Plant Sci. 6:130.
  • Mozgova I, Köhler C, Hennig L. (2015) Keeping the gate closed: functions of the polycomb repressive complex PRC2 in development. Plant J. 83:121-32.
  • Lafon-Placette C, Köhler C. (2015) Epigenetic mechanisms of postzygotic reproductive isolation in plants. Curr. Opin. Plant Biol. 23C:39-44.
  • Figueiredo, DD, Köhler C. (2014) Signalling events regulating seed coat development. Biochem. Soc. Trans. 42: 358-63.
  • Lafon-Placette C, Köhler C. (2014) Embryo and endosperm, partners in seed development. Curr. Opin. Plant Biol. 17: 64-9.
  • Jarillo, J.A., Gaudin, V., Hennig, L., Köhler, C., Piñeiro, M. (2014) Plant chromatin warms up in Madrid: meeting summary of the 3rd European Workshop on Plant Chromatin 2013, Madrid, Spain. Epigenetics 9: 644-52.
  • Schatlowski, N., Köhler, C. (2012) Tearing down barriers: understanding the molecular mechanisms of interploidy hybridizations. J. Exp. Bot. 63: 6059-6067.
  • Jiang, H., Köhler, C. (2012) Evolution, function, and regulation of genomic imprinting in plant seed development. J.Exp. Bot. 63: 4712-4722.
  • Houba-Hérin, N., Hennig, L., Köhler, C., Gaudin, V. (2012) A fruitful chromatin harvest: Meeting summary of the Second European Workshop on Plant Chromatin 2011 in Versailles, France. Epigenetics 7:307-311.
  • Köhler, C., Wolff P., Spillane C. (2012) Epigenetic mechanisms underlying genomic imprinting in plants. Annu. Rev. Plant Biol. 63:331-52.
  • Köhler, C., Kradolfer D. (2011) Epigenetic mechanisms in the endosperm and their consequences for the evolution of flowering plants. Biochim. Biophys. Acta 1809: 438-43.
  •  Brownfield, L., Köhler, C. (2011) Unreduced gamete formation in plants: Mechanisms and prospects. J. Exp. Botany 62:1659-1668.
  • Köhler, C., Hennig, L. (2010) Regulation of cell identity by plant Polycomb and trithorax group proteins. Curr. Opin. Genet. Dev. 20: 541-547.
  • Köhler, C., Weinhofer-Molisch, I. (2010) Mechanisms and evolution of genomic imprinting in plants. Heredity, 105: 57-63.
  • Köhler, C., Mittelsten Scheid, O., Erilova, A. (2010) The impact of the triploid block on the origin and evolution of polyploid plants. Trends Genet. 26:142-148.
  • Köhler, C., Gaudin, V., Hennig, L. (2010) Green chromatin dynamics in Zurich: Meeting summary based on the European Workshop on Plant Chromatin 2009 in Zurich, Switzerland. Epigenetics 5:80-83. 
  • Köhler, C., Aichinger, E. (2010) Antagonizing Polycomb group-mediated gene repression by chromatin remodelers. Epigenetics 5:20.23.
  • Köhler, C., Villar, C.B.R. (2008) Programming of gene expression by Polycomb group proteins. Trends Cell Biol. 18: 236-243.
  • Köhler, C., Makarevich G. (2006) Epigenetic mechanisms governing seed development in plants. EMBO Rep. 7: 1223-1227.
  • Köhler, C., Grossniklaus, U. (2002). Epigenetics: The flowers that come in from the cold. Curr. Biol. 12: 129-131.
  • Köhler, C., Grossniklaus, U. (2002). Epigenetic inheritance of expression states in plant development: the role of Polycomb group proteins. Curr. Opin. Cell. Biol. 14: 773-779.
  • Grossniklaus, U., Spillane, C., Page, D., Köhler, C. (2001). Genomic imprinting and seed development: endosperm formation with and without sex. Curr. Opin. Plant Biol. 4:21-27.

 

Book chapters

  • Weinhofer I, Köhler C. (2014) Endosperm-specific chromatin profiling by fluorescence-activated nuclei sorting and ChIP-on-chip. Methods Mol Biol. 1112:105-15.
  • Aichinger E., Köhler C. (2010) Bisulphite sequencing of plant genomic DNA. Methods Mol Biol. 655: 433-443.
  • Villar C.B., Köhler C. (2010) Plant chromatin immunoprecipitation. Methods Mol Biol. 655:401-411.
  • Hennig L., Köhler C. (2007) Case studies for transcriptional profiling. Plant Systems Biology. 97:87-97.
  • Köhler C, Grossniklaus U. (2004) Seed development and genomic imprinting in plants. Epigenetics and Chromatin. Prog. Mol. Subcell. Biol. 38:237-262.

Editorials

  • Köhler C, Springer, N (2017) Plant epigenomics—deciphering the mechanisms of epigenetic inheritance and plasticity in plants. Genome Biology 18:132.

Books

  • Plant Developmental Biology: Methods and Protocols (2010) Köhler, C., Hennig, L. eds. Springer, Heidelberg.

Patents

  • 2010 "Production of unreduced microspores and pollen" (T-09-039)
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