Publications of the Group

Journal Article (60)

1.
Journal Article
Orsi, E.; Claassens, N. J.; Nikel, P. I.; Lindner, S. N.: Growth-coupled selection of synthetic modules to accelerate cell factory development. Nature Communications 12 (1), 5295 (2021)
2.
Journal Article
Bouzon, M.; Döring, V.; Dubois, I.; Berger, A.; Stoffel, G.M.M.; Ramirez, L. C.; Meyer, S.N.; Fouré, M.; Roche, D.; Perret, A. et al.; Erb, T.J.; Bar-Even, A.; Lindner, S. N.: Change in cofactor specificity of oxidoreductases by adaptive evolution of an escherichia coli nadph-auxotrophic strain. mBio 12 (4), e00329-21 (2021)
3.
Journal Article
Krahn, I.; Bonder, D.; Torregrosa-Barragan, L.; Stoppel, D.; Krause, J. P.; Rosenfeldt, N.; Meiswinkel, T. M.; Seibold, G. M.; Wendisch, V. F.; Lindner, S. N.: Evolving a New Efficient Mode of Fructose Utilization for Improved Bioproduction in Corynebacterium glutamicum. Frontiers in Bioengineering and Biotechnology 9, 669093 (2021)
4.
Journal Article
Leger, D.; Matassa, S.; Noor, E.; Shepon, A.; Milo, R.; Bar-Even, A.: Photovoltaic-driven microbial protein production can use land and sunlight more efficiently than conventional crops. Proceedings of the National Academy of Sciences of the United States of America 118 (26), e2015025118 (2021)
5.
Journal Article
Scheffen, M.; Marchal, D.G.; Beneyton, T.; Schuller, S.K.; Klose, M.; Diehl, C.; Lehmann, J.; Pfister, P.; Carrillo, M.; He, H. et al.; Aslan, S.; Cortina, N.S.; Claus, P.; Bollschweiler, D.; Baret, J.-C.; Schuller, J.M.; Zarzycki, J.; Bar-Even, A.; Erb, T.J.: A new-to-nature carboxylation module to improve natural and synthetic CO2 fixation. Nature Catalysis 4, pp. 105 - 115 (2021)
6.
Journal Article
Cotton, C. A. R.; Bernhardsgrütter, I.; He, H.; Burgener, S.; Schulz, L.; Paczia, N.; Dronsella, B.; Erban, A.; Toman, S.; Dempfle, M. et al.; de Maria, A.; Kopka, J.; Lindner, S. N.; Erb, T. J.; Bar-Even, A.: Underground isoleucine biosynthesis pathways in E. coli. eLife 9, e54207 (2020)
7.
Journal Article
Ramirez, L. C.; Calvo Tusell, C.; Stoffel, G. M. M.; Lindner, S. N.; Osuna, S.; Erb, T. J.; Garcia-Borràs, M.; Bar-Even, A.; Acevedo-Rocha, C. G.: In vivo selection for formate dehydrogenases with high efficiency and specificity towards NADP+. ACS Catalysis 10, pp. 7512 - 7525 (2020)
8.
Journal Article
Aslan, S.; Noor, E.; Benito-Vaquerizo, S.; Lindner, S. N.; Bar-Even, A.: Design and engineering of E. coli metabolic sensor strains with a wide sensitivity range for glycerate. Metabolic Engineering 57, pp. 96 - 109 (2020)
9.
Journal Article
Claassens, N. J.; Bordanaba-Florit, G.; Cotton, C. A. R.; de Maria, A.; Finger-Bou, M.; Friedeheim, L.; Giner-Laguarda, N.; Munar-Palmer, M.; Newell, W.; Scarinci, G. et al.; Verbunt, J.; de Vries, S.T.; Yilmaz, S.; Bar-Even, A.: Replacing the Calvin cycle with the reductive glycine pathway in Cupriavidus necator. Metabolic Engineering 62, pp. 30 - 41 (2020)
10.
Journal Article
Claassens, N. J.; Scarinci, G.; Fischer, A.; Flamholz, A.I.; Newell, W.; Frielingsdorf, S.; Lenz, O.; Bar-Even, A.: Phosphoglycolate salvage in a chemolithoautotroph using the Calvin cycle. Proceedings of the National Academy of Sciences of the United States of America 117 (36), pp. 22452 - 22461 (2020)
11.
Journal Article
Cotton, C. A. R.; Claassens, N. J.; Benito-Vaquerizo, S.; Bar-Even, A.: Renewable methanol and formate as microbial feedstocks. Current Opinion in Biotechnology 62, pp. 168 - 180 (2020)
12.
Journal Article
de Almeida, C.P.; de Carvalho Paulino, J.F.; Carbonell, S.A.M.; Chiorato, A.F.; Song, Q.; Rainaldi, V.; Rodriguez, M.; Papa, R.; Benchimol-Reis, L.L.: Genetic diversity, population structure, and andean introgression in Brazilian common bean cultivars after half a century of genetic breeding. Genes 11 (11), 1298 (2020)
13.
Journal Article
Flamholz, A.I.; Dugan, E.; Blikstad, C.; Gleizer, S.; Ben-Nissan, R.; Amram, S.; Antonovsky, N.; Ravishankar, S.; Noor, E.; Bar-Even, A. et al.; Milo, R.; Savage, D.F.: Functional reconstitution of a bacterial co2 concentrating mechanism in E. coli. eLife 9, e59882, pp. 1 - 57 (2020)
14.
Journal Article
He, H.; Höper, R.; Dodenhöft, M.; Marlière, P.; Bar-Even, A.: An optimized methanol assimilation pathway relying on promiscuous formaldehyde-condensing aldolases in E. coli. Metabolic Engineering 60, pp. 1 - 13 (2020)
15.
Journal Article
He, H.; Noor, E.; Ramos-Parra, P. A.; García-Valencia, L. E.; Patterson, J. A.; Díaz de la Garza, R. I.; Hanson, A. D.; Bar-Even, A.: In Vivo Rate of Formaldehyde Condensation with Tetrahydrofolate. Metabolites 10 (2), 65 (2020)
16.
Journal Article
Kim, S.; Lindner, S. N.; Aslan, S.; Yishai, O.; Wenk, S.; Schann, K.; Bar-Even, A.: Growth of E. coli on formate and methanol via the reductive glycine pathway. Nature Chemical Biology 16 (5), pp. 538 - 545 (2020)
17.
Journal Article
Lindner, S. N.; Aslan, S.; Mueller, A.; Hoffart, E.; Behrens, P.; Edlich-Muth, C.; Blombach, B.; Bar-Even, A.: A synthetic glycerol assimilation pathway demonstrates biochemical constraints of cellular metabolism. The FEBS Journal 287 (1), pp. 160 - 172 (2020)
18.
Journal Article
Orsi, E.; Beekwilder, J.; Eggink, G.; Kengen, S.W.M.; Weusthuis, R.A.: The transition of Rhodobacter sphaeroides into a microbial cell factory. Biotechnology and Bioengineering 118 (2), pp. 531 - 541 (2020)
19.
Journal Article
Patterson, J.A.; He, H.; Folz, J.S.; Li, Q.; Wilson, M.A.; Fiehn, O.; Bruner, S.D.; Bar-Even, A.; Hanson, A.D.: Thioproline formation as a driver of formaldehyde toxicity in Escherichia coli. Biochemical Journal 477 (9), pp. 1745 - 1757 (2020)
20.
Journal Article
Sánchez-Andrea, I.; Guedes, I.A.; Hornung, B.; Boeren, S.; Lawson, C.E.; Sousa, D.Z.; Bar-Even, A.; Claassens, N. J.; Stams, A.J.M.: The reductive glycine pathway allows autotrophic growth of Desulfovibrio desulfuricans. Nature Communications 11 (1), 5090 (2020)
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