Zeitschriftenartikel (212)

101.
Zeitschriftenartikel
Kubis, A.; Bar-Even, A.: Synthetic biology approaches for improving photosynthesis. Journal of Experimental Botany 70 (5), S. 1425 - 1433 (2019)
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102.
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Kudo, M.; Kidokoro, S.; Yoshida, T.; Mizoi, J.; Kojima, M.; Takebayashi, Y.; Sakakibara, H.; Fernie, A. R.; Shinozaki, K.; Yamaguchi-Shinozaki, K.: A gene-stacking approach to overcome the trade-off between drought stress tolerance and growth in Arabidopsis. The Plant Journal 97 (2), S. 240 - 256 (2019)
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103.
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Küken, A.; Eloundou-Mbebi, J. M. O.; Basler, G.; Nikoloski, Z.: Cellular determinants of metabolite concentration ranges. PLoS Computational Biology 15 (1), e1006687 (2019)
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104.
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Küken, A.; Nikoloski, Z.: Computational Approaches to Design and Test Plant Synthetic Metabolic Pathways. Plant Physiology 179 (3), S. 894 - 906 (2019)
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105.
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Kurochkin, I.; Khrameeva, E.; Tkachev, A.; Stepanova, V.; Vanyushkina, A.; Stekolshchikova, E.; Li, Q.; Zubkov, D.; Shichkova, P.; Halene, T. et al.; Willmitzer, L.; Giavalisco, P.; Akbarian, S.; Khaitovich, P.: Metabolome signature of autism in the human prefrontal cortex. Communications Biology 2 (1), 234 (2019)
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106.
Zeitschriftenartikel
Laitinen, R.; Nikoloski, Z.: Genetic basis of plasticity in plants. Journal of Experimental Botany 70 (3), S. 739 - 745 (2019)
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107.
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Langary, D.; Nikoloski, Z.: Inference of chemical reaction networks based on concentration profiles using an optimization framework. Chaos: An Interdisciplinary Journal of Nonlinear Science 29 (11), 113121, S. 113121 (2019)
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108.
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Lazare, S.; Bechar, D.; Fernie, A. R.; Brotman, Y.; Zaccai, M.: The proof is in the bulb: glycerol influences key stages of lily development. The Plant Journal 97 (2), S. 321 - 340 (2019)
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109.
Zeitschriftenartikel
Leebens-Mack, J. H.; Barker, M. S.; Carpenter, E. J.; Deyholos, M. K.; Gitzendanner, M. A.; Graham, S. W.; Grosse, I.; Li, Z.; Melkonian, M.; Mirarab, S. et al.; Porsch, M.; Quint, M.; Rensing, S. A.; Soltis, D. E.; Soltis, P. S.; Stevenson, D. W.; Ullrich, K. K.; Wickett, N. J.; DeGironimo, L.; Edger, P. P.; Jordon-Thaden, I. E.; Joya, S.; Liu, T.; Melkonian, B.; Miles, N. W.; Pokorny, L.; Quigley, C.; Thomas, P.; Villarreal, J. C.; Augustin, M. M.; Barrett, M. D.; Baucom, R. S.; Beerling, D. J.; Benstein, R. M.; Biffin, E.; Brockington, S. F.; Burge, D. O.; Burris, J. N.; Burris, K. P.; Burtet-Sarramegna, V.; Caicedo, A. L.; Cannon, S. B.; Çebi, Z.; Chang, Y.; Chater, C.; Cheeseman, J. M.; Chen, T.; Clarke, N. D.; Clayton, H.; Covshoff, S.; Crandall-Stotler, B. J.; Cross, H.; dePamphilis, C. W.; Der, J. P.; Determann, R.; Dickson, R. C.; Stilio, D.; S., V.; Ellis, S.; Fast, E.; Feja, N.; Field, K. J.; Filatov, D. A.; Finnegan, P. M.; Floyd, S. K.; Fogliani, B.; García, N.; Gâteblé, G.; Godden, G. T.; Goh, F. (. Y.; Greiner, S.; Harkess, A.; Heaney, J. M.; Helliwell, K. E.; Heyduk, K.; Hibberd, J. M.; Hodel, R. G. J.; Hollingsworth, P. M.; Johnson, M. T. J.; Jost, R.; Joyce, B.; Kapralov, M. V.; Kazamia, E.; Kellogg, E. A.; Koch, M. A.; Von Konrat, M.; Könyves, K.; Kutchan, T. M.; Lam, V.; Larsson, A.; Leitch, A. R.; Lentz, R.; Li, F.-W.; Lowe, A. J.; Ludwig, M.; Manos, P. S.; Mavrodiev, E.; McCormick, M. K.; McKain, M.; McLellan, T.; McNeal, J. R.; Miller, R. E.; Nelson, M. N.; Peng, Y.; Ralph, P.; Real, D.; Riggins, C. W.; Ruhsam, M.; Sage, R. F.; Sakai, A. K.; Scascitella, M.; Schilling, E. E.; Schlösser, E.-M.; Sederoff, H.; Servick, S.; Sessa, E. B.; Shaw, A. J.; Shaw, S. W.; Sigel, E. M.; Skema, C.; Smith, A. G.; Smithson, A.; Stewart, C. N.; Stinchcombe, J. R.; Szövényi, P.; Tate, J. A.; Tiebel, H.; Trapnell, D.; Villegente, M.; Wang, C.-N.; Weller, S. G.; Wenzel, M.; Weststrand, S.; Westwood, J. H.; Whigham, D. F.; Wu, S.; Wulff, A. S.; Yang, Y.; Zhu, D.; Zhuang, C.; Zuidof, J.; Chase, M. W.; Pires, J. C.; Rothfels, C. J.; Yu, J.; Chen, C.; Chen, L.; Cheng, S.; Li, J.; Li, R.; Li, X.; Lu, H.; Ou, Y.; Sun, X.; Tan, X.; Tang, J.; Tian, Z.; Wang, F.; Wang, J.; Wei, X.; Xu, X.; Yan, Z.; Yang, F.; Zhong, X.; Zhou, F.; Zhu, Y.; Zhang, Y.; Ayyampalayam, S.; Barkman, T. J.; Nguyen, N.-p.; Matasci, N.; Nelson, D. R.; Sayyari, E.; Wafula, E. K.; Walls, R. L.; Warnow, T.; An, H.; Arrigo, N.; Baniaga, A. E.; Galuska, S.; Jorgensen, S. A.; Kidder, T. I.; Kong, H.; Lu-Irving, P.; Marx, H. E.; Qi, X.; Reardon, C. R.; Sutherland, B. L.; Tiley, G. P.; Welles, S. R.; Yu, R.; Zhan, S.; Gramzow, L.; Theißen, G.; Wong, G. K.-S.; Initiative, O. T. P. T.: One thousand plant transcriptomes and the phylogenomics of green plants. Nature 574 (7780), S. 679 - 685 (2019)
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110.
Zeitschriftenartikel
Lehwark, P.; Greiner, S.: GB2sequin-A file converter preparing custom GenBank files for database submission. Genomics 111 (4), S. 759 - 761 (2019)
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111.
Zeitschriftenartikel
Levey, M.; Timm, S.; Mettler-Altmann, T.; Borghi, G.L.; Koczor, M.; Arrivault, S.; Pm Weber, A.; Bauwe, H.; Gowik, U.; Westhoff, P.: Efficient 2-phosphoglycolate degradation is required to maintain carbon assimilation and allocation in the C4 plant Flaveria bidentis. Journal of Experimental Botany 70 (2), S. 575 - 587 (2019)
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112.
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Li, J.; Tietz, S.; Cruz, J. A.; Strand, D.; Xu, Y.; Chen, J.; Kramer, D. M.; Hu, J.: Photometric screens identified Arabidopsis peroxisome proteins that impact photosynthesis under dynamic light conditions. The Plant Journal 97 (3), S. 460 - 474 (2019)
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113.
Zeitschriftenartikel
Li, L.; Krznar, P.; Erban, A.; Agazzi, A.; Martin-Levilain, J.; Supale, S.; Kopka, J.; Zamboni, N.; Maechler, P.: Metabolomics identifies a biomarker revealing in vivo loss of functional β-cell mass before diabetes onset. Diabetes 68 (12), S. 2272 - 2286 (2019)
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114.
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Li, M.; Keenan, C. R.; Lopez-Campos, G.; Mangum, J. E.; Chen, Q.; Prodanovic, D.; Xia, Y. C.; Langenbach, S. Y.; Harris, T.; Hofferek, V. et al.; Reid, G. E.; Stewart, A. G.: A Non-canonical Pathway with Potential for Safer Modulation of Transforming Growth Factor-beta 1 in Steroid-Resistant Airway Diseases. iScience 12, S. 232 - 246 (2019)
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115.
Zeitschriftenartikel
Li, Y.; Lu, Y.; Li, L.; Chu, Z.; Zhang, H.; Li, H.; Fernie, A. R.; Ouyang, B.: Impairment of hormone pathways results in a general disturbance of fruit primary metabolism in tomato. Food Chemistry 274, S. 170 - 179 (2019)
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116.
Zeitschriftenartikel
Li, Z.; Bock, R.: Rapid functional activation of a horizontally transferred eukaryotic gene in a bacterial genome in the absence of selection. Nucleic Acids Research 47 (12), S. 6351 - 6359 (2019)
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117.
Zeitschriftenartikel
Ligas, J.; Pineau, E.; Bock, R.; Huynen, M. A.; Meyer, E. H.: The assembly pathway of complex I in Arabidopsis thaliana. The Plant Journal 97 (3), S. 447 - 459 (2019)
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118.
Zeitschriftenartikel
Lima, V. F.; Anjos, L. d.; Medeiros, D.B.; Cândido-Sobrinho, S. A.; de Souza, L. P.; Gago, J.; Fernie, A. R.; Daloso, D. M.: The sucrose-to-malate ratio correlates with the faster CO2 and light stomatal responses of angiosperms compared to ferns. New Phytologist 223 (4), S. 1873 - 1887 (2019)
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119.
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Liu, M.-Y.; Tang, D.; Shi, Y.; Ma, L.; Li, Y.; Zhang, Q.; Ruan, J.: Short-term inhibition of glutamine synthetase leads to reprogramming of amino acid and lipid metabolism in roots and leaves of tea plant (Camellia sinensis L.). BMC Plant Biology 19 (1), 425 (2019)
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120.
Zeitschriftenartikel
Loiacono, F.V.; Thiele, W.; Schöttler, M. A.; Tillich, M.; Bock, R.: Establishment of a Heterologous RNA Editing Event in Chloroplasts. Plant Physiology 181 (3), S. 891 - 900 (2019)
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121.
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Lortzing, V.; Oberlaender, J.; Lortzing, T.; Tohge, T.; Steppuhn, A.; Kunze, R.; Hilker, M.: Insect egg deposition renders plant defence against hatching larvae more effective in a salicylic acid-dependent manner. Plant, Cell and Environment 42 (3 - SI), S. 1019 - 1032 (2019)
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122.
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Luzarowski, M.; Skirycz, A.: Emerging strategies for the identification of protein-metabolite interactions. Journal of Experimental Botany 70 (18), S. 4605 - 4618 (2019)
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123.
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Ma, X.; Balazadeh, S.; Mueller-Roeber, B.: Tomato fruit ripening factor NOR controls leaf senescence. Journal of Experimental Botany 70 (10), S. 2727 - 2740 (2019)
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124.
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Machin, F. Q.; Beckers, M.; Tian, X.; Fairnie, A.; Cheng, T.; Scheible, W.-R.; Doerner, P.: Inducible reporter/driver lines for the Arabidopsis root with intrinsic reporting of activity state. The Plant Journal 98 (1), S. 153 - 164 (2019)
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125.
Zeitschriftenartikel
Madhavan, S.; Paranidharan, V.; Erban, A.; Al-Sadi, A.M.; Kopka, J.; Velazhahan, R.: The metabolic response of suspension-cultured cells from blast-resistant and -susceptible rice (Oryza sativa L.) genotypes to a Pyricularia oryzae elicitor. Indian Phytopathology 72 (2), S. 195 - 202 (2019)
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126.
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Mangel, N.; Fudge, J. B.; Li, K.-T.; Wu, T.-Y.; Tohge, T.; Fernie, A. R.; Szurek, B.; Fitzpatrick, T. B.; Gruissem, W.; Vanderschuren, H.: Enhancement of vitamin B-6 levels in rice expressing Arabidopsis vitamin B-6 biosynthesis de novo genes. The Plant Journal 99 (6), S. 1047 - 1065 (2019)
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127.
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Martins, A. O.; Omena-Garcia, R. P.; Oliveira, F. S.; Silva, W. A.; Hajirezaei, M.-R.; Vallarino, J. G.; Ribeiro, D. M.; Fernie, A. R.; Nunes-Nesi, A.; Araujo, W. L.: Differential root and shoot responses in the metabolism of tomato plants exhibiting reduced levels of gibberellin. Environmental and Experimental Botany 157, S. 331 - 343 (2019)
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128.
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Matz, J. M.; Watanabe, M.; Falade, M.; Tohge, T.; Hoefgen, R.; Matuschewski, K.: Plasmodium Para-Aminobenzoate Synthesis and Salvage Resolve Avoidance of Folate Competition and Adaptation to Host Diet. Cell Reports 26 (2), S. 356 - 363 (2019)
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129.
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McFarlane, C.R.; Shah, N.R.; Kabasakal, B.V.; Echeverria, B.; Cotton, C. A. R.; Bubeck, D.; Murray, J.W.: Structural basis of light-induced redox regulation in the Calvin–Benson cycle in cyanobacteria. Proceedings of the National Academy of Sciences of the United States of America 116 (42), S. 20984 - 20990 (2019)
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130.
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Medeiros, D.B.; Arrivault, S.; Alpers, J.; Fernie, A. R.; Aarabi, F.: Non-aqueous Fractionation (NAF) for Metabolite Analysis in Subcellular Compartments of Arabidopsis Leaf Tissues. Bio-protocol 9 (20), UNSP e3399 (2019)
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131.
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Medeiros, D.B.; da Luz, L.M.; de Oliveira, H.O.; Araújo, W.L.; Daloso, D.M.; Fernie, A. R.: Metabolomics for understanding stomatal movements. Theoretical and Experimental Plant Physiology 31 (1), S. 91 - 102 (2019)
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132.
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Meyer, E. H.; Welchen, E.; Carrie, C.: Assembly of the Complexes of the Oxidative Phosphorylation System in Land Plant Mitochondria. Annual Review of Plant Biology 70, S. 23 - 50 (2019)
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133.
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Meyer, R. C.; Gryczka, C.; Neitsch, C.; Mueller, M.; Braeutigam, A.; Schlereth, A.; Schoen, H.; Weigelt-Fischer, K.; Altmann, T.: Genetic diversity for nitrogen use efficiency in Arabidopsis thaliana. Planta 250 (1), S. 41 - 57 (2019)
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134.
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Moreno, J.C.: The proteOMIC era: a useful tool to gain deeper insights into plastid physiology. Theoretical and Experimental Plant Physiology 31 (1), S. 157 - 171 (2019)
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135.
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Moreno-Romero, J.; Del Toro-De Leon, G.; Yadav, V. K.; Santos-Gonzalez, J.; Köhler, C.: Epigenetic signatures associated with imprinted paternally expressed genes in the Arabidopsis endosperm. Genome Biology: Biology for the Post-Genomic Era 20, 41 (2019)
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136.
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Moschen, S.; Marino, J.; Nicosia, S.; Higgins, J.; Alseekh, S.; Astigueta, F.; Bengoa Luoni, S.; Rivarola, M.; Fernie, A. R.; Blanchet, N. et al.; Langlade, N.B.; Paniego, N.; Fernández, P.; Heinz, R.A.: Exploring gene networks in two sunflower lines with contrasting leaf senescence phenotype using a system biology approach. BMC Plant Biology 19 (1), S. 446 (2019)
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137.
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Mubeen, U.; Giavalisco, P.; Caldana, C.: TOR inhibition interrupts the metabolic homeostasis by shifting the carbon-nitrogen balance in Chlamydomonas reinhardtii. Plant Signaling & Behavior 14 (11), 1670595, S. 1670595 (2019)
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138.
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Mur, L.A.J.; Kumari, A.; Brotman, Y.; Zeier, J.; Mandon, J.; Cristescu, S.M.; Harren, F.; Kaiser, W.M.; Fernie, A. R.; Gupta, K.J.: Nitrite and nitric oxide are important in the adjustment of primary metabolism during the hypersensitive response in tobacco. Journal of Experimental Botany 70 (17), S. 4571 - 4582 (2019)
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139.
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Murik, O.; Tirichine, L.; Prihoda, J.; Thomas, Y.; Araujo, W. L.; Allen, A. E.; Fernie, A. R.; Bowler, C.: Downregulation of mitochondrial alternative oxidase affects chloroplast function, redox status and stress response in a marine diatom. New Phytologist 221 (3), S. 1303 - 1316 (2019)
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140.
Zeitschriftenartikel
Naake, T.; Fernie, A. R.: MetNet: Metabolite Network Prediction from High-Resolution Mass Spectrometry Data in R Aiding Metabolite Annotation. Analytical Chemistry 91 (3), S. 1768 - 1772 (2019)
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141.
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Naseri, G.; Behrend, J.; Rieper, L.; Mueller-Roeber, B.: COMPASS for rapid combinatorial optimization of biochemical pathways based on artificial transcription factors. Nature Communications 10, 2615 (2019)
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142.
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Nieuwkoop, T.; Claassens, N. J.; van der Oost, J.: Improved protein production and codon optimization analyses in Escherichia coli by bicistronic design. Microbial Biotechnology 12 (1), S. 173 - 179 (2019)
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143.
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Nieva, A.S.; Vilas, J.M.; Gárriz, A.; Maiale, S.J.; Menéndez, A.B.; Erban, A.; Kopka, J.; Ruiz, O.A.: The fungal endophyte Fusarium solani provokes differential effects on the fitness of two Lotus species. Plant Physiology and Biochemistry 144, S. 100 - 109 (2019)
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144.
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Nunes-Nesi, A.; Alseekh, S.; de Silva, O.; Magnum, F.; Omranian, N.; Lichtenstein, G.; Mirnezhad, M.; González, R. R. R.; Garcia, J. S. y.; Conte, M. et al.; Leiss, K. A.; Klinkhamer, P. G. L.; Nikoloski, Z.; Carrari, F.; Fernie, A. R.: Identification and characterization of metabolite quantitative trait loci in tomato leaves and comparison with those reported for fruits and seeds. Metabolomics 15 (4), 46 (2019)
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145.
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Olas, J. J.; Van Dingenen, J.; Abel, C.; Dzialo, M.; Feil, R.; Krapp, A.; Schlereth, A.; Wahl, V.: Nitrate acts at the Arabidopsis thaliana shoot apical meristem to regulate flowering time. New Phytologist 223 (2), S. 814 - 827 (2019)
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146.
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Olas, J. J.; Wahl, V.: Tissue-specific NIA1 and NIA2 expression in Arabidopsis thaliana. Plant Signaling & Behavior 14 (11), 1656035 (2019)
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147.
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Omena-Garcia, R. P.; Martins, A. O.; Medeiros, D.B.; Vallarino, J. G.; Ribeiro, D. M.; Fernie, A. R.; Araújo, W. L.; Nunes-Nesi, A.: Growth and metabolic adjustments in response to gibberellin deficiency in drought stressed tomato plants. Environmental and Experimental Botany 159, S. 95 - 107 (2019)
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148.
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Pandey, P. K.; Quilichini, T. D.; Vaid, N.; Gao, P.; Xiang, D.; Datla, R.: Versatile and multifaceted CRISPR/Cas gene editing tool for plant research. Seminars in Cell & Developmental Biology 96, S. 107 - 114 (2019)
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149.
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Pandey, P. K.; Yu, J.; Omranian, N.; Alseekh, S.; Vaid, N.; Fernie, A. R.; Nikoloski, Z.; Laitinen, R.: Plasticity in metabolism underpins local responses to nitrogen in Arabidopsis thaliana populations. Plant Direct 3 (11), e00186 (2019)
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150.
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Patzke, K.; Prananingrum, P.; Klemens, P. A. W.; Trentmann, O.; Rodrigues, C. M.; Keller, I.; Fernie, A. R.; Geigenberger, P.; Boelter, B.; Lehmann, M. et al.; Schmitz-Esser, S.; Pommerrenig, B.; Haferkamp, I.; Neuhaus, H. E.: The Plastidic Sugar Transporter pSuT Influences Flowering and Affects Cold Responses. Plant Physiology 179 (2), S. 569 - 587 (2019)
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