Publications of Zoran Nikoloski
Journal Article (19)
1.
Journal Article
165 (3), pp. 1380 - 1391 (2014)
Bottom-up Metabolic Reconstruction of Arabidopsis and Its Application to Determining the Metabolic Costs of Enzyme Production. Plant Physiology 2.
Journal Article
165 (3), pp. 1120 - 1132 (2014)
Genome-Wide Association in Tomato Reveals 44 Candidate Loci for Fruit Metabolic Traits. Plant Physiology 3.
Journal Article
26 (5), pp. 1901 - 1912 (2014)
Decreased Nucleotide and Expression Diversity and Modified Coexpression Patterns Characterize Domestication in the Common Bean. The Plant Cell 4.
Journal Article
5, 3537 (2014)
Metabolic efficiency underpins performance trade-offs in growth of Arabidopsis thaliana. Nature Communications 5.
Journal Article
96, pp. 171 - 194 (2014)
In search for an accurate model of the photosynthetic carbon metabolism. Mathematics and Computers in Simulation 6.
Journal Article
9 (1), e85435 (2014)
Deducing Hybrid Performance from Parental Metabolic Profiles of Young Primary Roots of Maize by Using a Multivariate Diallel Approach. PLoS ONE 7.
Journal Article
11 (97), 20140362 (2014)
Quantitative analyses of the plant cytoskeleton reveal underlying organizational principles. Interface: Journal of the Royal Society 8.
Journal Article
30 (22), pp. 3291 - 2 (2014)
img2net: automated network-based analysis of imaged phenotypes. Bioinformatics 9.
Journal Article
7 (5 - SI), pp. 893 - 911 (2014)
Analysis of Short-Term Metabolic Alterations in Arabidopsis Following Changes in the Prevailing Environmental Conditions. Molecular Plant 10.
Journal Article
56 (9 - SI), pp. 941 - 959 (2014)
Analysis of metabolic alterations in Arabidopsis following changes in the carbon dioxide and oxygen partial pressures. Journal of Integrative Plant Biology 11.
Journal Article
9 (8), pp. 1803 - 1824 (2014)
Flux profiling of photosynthetic carbon metabolism in intact plants. Nature Protocols 12.
Journal Article
4, 5067 (2014)
Metabolic variation between japonica and indica rice cultivars as revealed by non-targeted metabolomics. Scientific Reports 13.
Journal Article
9 (8), e103637 (2014)
Concurrent Conditional Clustering of Multiple Networks: COCONETS. PLoS One 14.
Journal Article
21 (6), pp. 428 - 445 (2014)
Biological Cluster Evaluation for Gene Function Prediction. Journal of Computational Biology 15.
Journal Article
164 (1), pp. 55 - 68 (2014)
Conserved Changes in the Dynamics of Metabolic Processes during Fruit Development and Ripening across Species. Plant Physiology 16.
Journal Article
4 (32), pp. 16777 - 16781 (2014)
From systems biology to systems chemistry: metabolomic procedures enable insight into complex chemical reaction networks in water. RSC Advances 17.
Journal Article
26 (6), pp. 2310 - 2350 (2014)
Systems Analysis of the Response of Photosynthesis, Metabolism, and Growth to an Increase in Irradiance in the Photosynthetic Model Organism Chlamydomonas reinhardtii. The Plant Cell 18.
Journal Article
289 (44), pp. 30387 - 30403 (2014)
Metabolite Profiling and Integrative Modeling Reveal Metabolic Constraints for Carbon Partitioning under Nitrogen Starvation in the Green Algae Haematococcus pluvialis. The Journal of Biological Chemistry 19.
Journal Article
10 (6), e1003656 (2014)
Variability of Metabolite Levels Is Linked to Differential Metabolic Pathways in Arabidopsis's Responses to Abiotic Stresses. PLoS Computational Biology Book Chapter (1)
20.
Book Chapter
The Sequence Reconstruction Problem. In: Discrete and Topological Models in Molecular Biology, pp. 23 - 43 (Eds. Jonoska , N.; Saito, M.). Springer-Verlag, Berlin, Heidelberg (2014)