Journal Article (195)

101.
Journal Article
Gago, J.; Daloso, D. M.; Figueroa, C. M.; Flexas, J.; Fernie, A. R.; Nikoloski, Z.: Relationships of Leaf Net Photosynthesis, Stomatal Conductance, and Mesophyll Conductance to Primary Metabolism: A Multispecies Meta-Analysis Approach. Plant Physiology 171 (1), pp. 265 - 279 (2016)
102.
Journal Article
Omranian, N.; Eloundou-Mbebi, J. M. O.; Mueller-Roeber, B.; Nikoloski, Z.: Gene regulatory network inference using fused LASSO on multiple data sets. Scientific Reports 6, 20533 (2016)
103.
Journal Article
Basler, G.; Küken, A.; Fernie, A. R.; Nikoloski, Z.: Photorespiratory Bypasses Lead to Increased Growth in Arabidopsis thaliana: Are Predictions Consistent with Experimental Evidence? Frontiers in Bioengineering and Biotechnology 4, 31 (2016)
104.
Journal Article
Basler, G.; Nikoloski, Z.; Larhlimi, A.; Barabasi, A.-L.; Liu, Y.-Y.: Control of fluxes in metabolic networks. Genome Research 26 (7), pp. 956 - 968 (2016)
105.
Journal Article
Beleggia, R.; Rau, D.; Laido, G.; Platani, C.; Nigro, F.; Fragasso, M.; De Vita, P.; Scossa, F.; Fernie, A. R.; Nikoloski, Z. et al.; Papa, R.: Evolutionary Metabolomics Reveals Domestication-Associated Changes in Tetraploid Wheat Kernels. Molecular Biology and Evolution 33 (7), pp. 1740 - 1753 (2016)
106.
Journal Article
Eloundou-Mbebi, J. M. O.; Küken, A.; Omranian, N.; Kleessen, S.; Neigenfind, J.; Basler, G.; Nikoloski, Z.: A network property necessary for concentration robustness. Nature Communications 7, 13255 (2016)
107.
Journal Article
Estevez, S.; Nikoloski, Z.: Metabolic Network Constrains Gene Regulation of C4 Photosynthesis: The Case of Maize. Plant & Cell Physiology 57 (5), pp. 933 - 943 (2016)
108.
Journal Article
Florez-Sarasa, I. D.; Ribas-Carbo, M.; Fernandez Del-Saz, N.; Schwahn, K.; Nikoloski, Z.; Fernie, A. R.; Flexas, J.: Unravelling the invivo regulation and metabolic role of the alternative oxidase pathway in C-3 species under photoinhibitory conditions. New Phytologist 212 (1), pp. 66 - 79 (2016)
109.
Journal Article
Liu, Z.; Omranian, N.; Neumetzler, L.; Wang, T.; Herter, T.; Usadel, B.; Demura, T.; Giavalisco, P.; Nikoloski, Z.; Persson, S.: A transcriptional and metabolic framework for secondary wall formation in arabidopsis. Plant Physiology 172 (2), pp. 1334 - 1351 (2016)
110.
Journal Article
Orf, I.; Timm, S.; Bauwe, H.; Fernie, A. R.; Hagemann, M.; Kopka, J.; Nikoloski, Z.: Can cyanobacteria serve as a model of plant photorespiration? - a comparative meta-analysis of metabolite profiles. Journal of Experimental Botany 67 (10), pp. 2941 - 2952 (2016)
111.
Journal Article
Ruprecht, C.; Mendrinna, A.; Tohge, T.; Sampathkumar, A.; Klie, S.; Fernie, A. R.; Nikoloski, Z.; Persson, S.; Mutwil, M.: FamNet: A Framework to Identify Multiplied Modules Driving Pathway Expansion in Plants. Plant Physiology 170 (3), pp. 1878 - 1894 (2016)
112.
Journal Article
Sajitz-Hermstein, M.; Nikoloski, Z.: Functional centrality as a predictor of shifts in metabolic flux states. BMC research notes 9 (1), 317 (2016)
113.
Journal Article
Sajitz-Hermstein, M.; Nikoloski, Z.: Multi-objective shadow prices point at principles of metabolic regulation. Biosystems [Elektronische Ressource]: Journal of Biological and Information Processing Sciences 146, pp. 91 - 101 (2016)
114.
Journal Article
Sajitz-Hermstein, M.; Töpfer, N.; Kleessen, S.; Fernie, A. R.; Nikoloski, Z.: iReMet-flux: constraint-based approach for integrating relative metabolite levels into a stoichiometric metabolic models. Bioinformatics 32 (17), pp. i755 - i762 (2016)
115.
Journal Article
Schwahn, K.; Küken, A.; Kliebenstein, D.J.; Fernie, A. R.; Nikoloski, Z.: Observability of plant metabolic networks is reflected in the correlation of metabolic profiles. Plant Physiology 172 (2), pp. 1324 - 1333 (2016)
116.
Journal Article
Scossa, F.; Brotman, Y.; de Abreu e Lima, F.; Willmitzer, L.; Nikoloski, Z.; Tohge, T.; Fernie, A. R.: Genomics-based strategies for the use of natural variation in the improvement of crop metabolism. Plant Science 242, pp. 47 - 64 (2016)
117.
Journal Article
Rosado-Souza, L.; Scossa, F.; Chaves, I. S.; Kleessen, S.; Salvador, L. F. D.; Milagre, J. C.; Finger, F.; Bhering, L. L.; Sulpice, R.; Araujo, W. L. et al.; Nikoloski, Z.; Fernie, A. R.; Nunes-Nesi, A.: Exploring natural variation of photosynthetic, primary metabolism and growth parameters in a large panel of Capsicum chinense accessions. Planta 242 (3), pp. 677 - 691 (2015)
118.
Journal Article
Cui, X.; Lv, Y.; Chen, M.; Nikoloski, Z.; Twell, D.; Zhang, D.: Young Genes out of the Male: An Insight from Evolutionary Age Analysis of the Pollen Transcriptome. Molecular Plant 8 (6), pp. 935 - 945 (2015)
119.
Journal Article
Kleessen, S.; Irgang, S.; Klie, S.; Giavalisco, P.; Nikoloski, Z.: Integration of transcriptomics and metabolomics data specifies the metabolic response of Chlamydomonas to rapamycin treatment. The Plant Journal 81 (5), pp. 822 - 835 (2015)
120.
Journal Article
Alseekh, S.; Tohge, T.; Wendenburg, R.; Scossa, F.; Omranian, N.; Li, J.; Kleessen, S.; Giavalisco, P.; Pleban, T.; Mueller-Roeber, B. et al.; Zamir, D.; Nikoloski, Z.; Fernie, A. R.: Identification and mode of inheritance of quantitative trait Loci for secondary metabolite abundance in tomato. The Plant Cell 27 (3), pp. 485 - 512 (2015)
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