Publikationen der Gruppe

Zeitschriftenartikel (296)

  1. 1.
    Annunziata, M. G.; Ciarmiello, L.; Woodrow, P.; Maximova, E.; Fuggi, A.; Carillo, P.: Durum wheat roots adapt to salinity remodelling the cellular content of nitrogen metabolites and sucrose. Frontiers in Plant Science 7, 2035 (2017)
  2. 2.
    Apelt, F.; Breuer, D.; Olas, J. J.; Annunziata, M. G.; Flis, A.; Nikoloski, Z.; Kragler, F.; Stitt, M.: Circadian, Carbon, and Light Control of Expansion Growth and Leaf Movement. Plant Physiology 174 (3), S. 1949 - 1968 (2017)
  3. 3.
    Arrivault, S.; Obata, T.; Szecówka, M.; Mengin, V.; Guenther, M.; Höhne, M.; Fernie, A. R.; Stitt, M.: Metabolite pools and carbon flow during C4 photosynthesis in maize: 13CO2 labeling kinetics and cell type fractionation. Journal of Experimental Botany 68, S. 283 - 298 (2017)
  4. 4.
    Bledsoe, S. W.; Henry, C.; Griffiths, C. A.; Paul, M. J.; Feil, R.; Lunn, J. E.; Stitt, M.; Lagrimini, L. M.: The role of Tre6P and SnRK1 in maize early kernel development and events leading to stress-induced kernel abortion. BMC Plant Biology (2017)
  5. 5.
    Ficarra, F. A.; Grandellis, C.; Galván, E. M.; Ielpi, L.; Feil, R.; Lunn, J. E.; Gottig, N.; Ottado, J.: Xanthomonas citri ssp. citri requires the outer membrane porin OprB for maximal virulence and biofilm formation. Molecular Plant Pathology 18 (5), S. 720 - 733 (2017)
  6. 6.
    Glaubitz, U.; Li, X.; Schaedel, S.; Erban, A.; Sulpice, R.; Kopka, J.; Hincha, D. K.; Zuther, E.: Integrated analysis of rice transcriptomic and metabolomic responses to elevated night temperatures identifies sensitivity- and tolerance-related profiles. Plant, Cell and Environment 40 (1), S. 121 - 137 (2017)
  7. 7.
    Graf, A.; Coman, D.; Uhrig, R.G.; Walsh, S.; Flis, A.; Stitt, M.; Gruissem, W.: Parallel analysis of arabidopsis circadian clock mutants reveals different scales of transcriptome and proteome regulation. Open Biology 7 (3), 160333 (2017)
  8. 8.
    Ishihara, H.; Moraes, T. A.; Pyl, E. T.; Schulze, W. X.; Obata, T.; Scheffel, A.; Fernie, A. R.; Sulpice, R.; Stitt, M.: Growth rate correlates negatively with protein turnover in Arabidopsis accessions. The Plant Journal 91 (3), S. 416 - 429 (2017)
  9. 9.
    Ivakov, A.; Flis, A.; Apelt, F.; Fünfgeld, M. F.F.; Scherer, U.; Stitt, M.; Kragler, F.; Vissenberg, K.; Persson, S.; Suslov, D.: Cellulose Synthesis and Cell Expansion Are Regulated by Different Mechanisms in Growing Arabidopsis Hypocotyls. The Plant Cell 29 (6), S. 1305 - 1315 (2017)
  10. 10.
    Malinova, I.; Alseekh, S.; Feil, R.; Fernie, A. R.; Baumann, O.; Schöttler, M. A.; Lunn, J. E.; Fettke, J.: Starch synthase 4 and plastidal phosphorylase differentially affect starch granule number and morphology. Plant Physiology (2017)
  11. 11.
    Marshall-Colon, A.; Long, S. P.; Allen, D. K.; Allen, G.; Beard, D. A.; Benes, B.; von Caemmerer, S.; Christensen, A. J.; Cox, D. J.; Hart, J. C. et al.; Hirst, P. M.; Kannan, K.; Katz, D. S.; Lynch, J. P.; Millar, A. J.; Panneerselvam, B.; Price, N. D.; Prusinkiewicz, P.; Raila, D.; Shekar, R. G.; Shrivastava, S.; Shukla, D.; Srinivasan, V.; Stitt, M.; Turk, M. J.; Voit, E. O.; Wang, Y.; Yin, X.; Zhu, X.-G.: Crops In Silico: Generating Virtual Crops Using an Integrative and Multi-scale Modeling Platform. Frontiers in Plant Science 8, 786 (2017)
  12. 12.
    Marshall-Colon, A.; Long, S. P.; Allen, D. K.; Allen, G.; Beard, D. A.; Benes, B.; von Caemmerer, S.; Christensen, A. J.; Cox, D. J.; Hart, J. C. et al.; Hirst, P. M.; Kannan, K.; Katz, D. S.; Lynch, J. P.; Millar, A. J.; Panneerselvam, B.; Price, N. D.; Prusinkiewicz, P.; Raila, D.; Shekar, R. G.; Shrivastava, S.; Shukla, D.; Srinivasan, V.; Stitt, M.; Turk, M. J.; Voit, E. O.; Wang, Y.; Yin, X.; Zhu, X.-G.: Crops In Silico: Generating Virtual Crops Using an Integrative and Multi-scale Modeling Platform. Frontiers in Plant Science (2017)
  13. 13.
    Santelia, D.; Lunn, J. E.: Transitory starch metabolism in guard cells: unique features for a unique function. Plant Physiology 174 (2), S. 539 - 549 (2017)
  14. 14.
    Woodrow, P.; Ciarmiello, L.F.; Annunziata, M. G.; Pacifico, S.; Iannuzzi, F.; Mirto, A.; D'Amelia, L.; Dell'Aversana, E.; Piccolella, S.; Fuggi, A. et al.; Carillo, P.: Durum wheat seedling responses to simultaneous high light and salinity involve a fine reconfiguration of amino acids and carbohydrate metabolism. Physiologia Plantarum 159 (3), S. 290 - 312 (2017)
  15. 15.
    Zhang, W.; Lunn, J. E.; Feil, R.; Wang, Y.; Zhao, J.; Tao, H.; Guo, Y.; Zhao, Z.: Trehalose 6-phosphate signal is closely related to sorbitol in apple (Malus domestica Borkh. Cv. Gala). Biology Open 6 (2), S. 260 - 268 (2017)
  16. 16.
    Bechtold, U.; Penfold, C. A.; Jenkins, D. J.; Legaie, R.; Moore, J. D.; Lawson, T.; Matthews, J. S. A.; Vialet-Chabrand, S. R. M.; Baxter, L.; Subramaniam, S. et al.; Hickman, R.; Florance, H.; Sambles, C.; Salmon, D. L.; Feil, R.; Bowden, L.; Hill, C.; Baker, N. R.; Lunn, J. E.; Finkenstaedt, B.; Mead, A.; Buchanan-Wollaston, V.; Beynon, J.; Rand, D. A.; Wild, D. L.; Denby, K. J.; Ott, S.; Smirnoff, N.; Mullineaux, P. M.: Time-Series Transcriptomics Reveals That AGAMOUS-LIKE22 Affects Primary Metabolism and Developmental Processes in Drought-Stressed Arabidopsis. The Plant Cell 28 (2), S. 345 - 366 (2016)
  17. 17.
    Coluccio Leskow, C.; Kamenetzky, L.; Guadalupe Dominguez, P.; Diaz Zirpolo, J. A.; Obata, T.; Costa, H.; Marti, M.; Taboga, O.; Keurentjes, J.; Sulpice, R. et al.; Ishihara, H.; Stitt, M.; Fernie, A. R.; Carrari, F.: Allelic differences in a vacuolar invertase affect Arabidopsis growth at early plant development. Journal of Experimental Botany 67 (14), S. 4091 - 4103 (2016)
  18. 18.
    Cookson, S. J.; Yadav, U. P.; Klie, S.; Morcuende, R.; Usadel, B.; Lunn, J. E.; Stitt, M.: Temporal kinetics of the transcriptional response to carbon depletion and sucrose readdition in Arabidopsis seedlings. Plant, Cell and Environment 39 (4), S. 768 - 786 (2016)
  19. 19.
    Czedik-Eysenberg, A.; Arrivault, S.; Lohse, M.A.; Feil, R.; Krohn, N.; Encke, B.; Nunes-Nesi, A.; Fernie, A. R.; Lunn, J. E.; Sulpice, R. et al.; Stitt, M.: The interplay between carbon availability and growth in different zones of the growing maize leaf. Plant Physiology 172 (2), S. 943 - 967 (2016)
  20. 20.
    Dyson, B. C.; Miller, M. A.E.; Feil, R.; Rattray, N.; Bowsher, C. G.; Goodacre, R.; Lunn, J. E.; Johnson, G. N.: FUM2, a cytosolic fumarase, is essential for acclimation to low temperature in arabidopsis thaliana. Plant Physiology 172 (1), S. 118 - 127 (2016)
  21. 21.
    Figueroa, C. M.; Feil, R.; Ishihara, H.; Watanabe, M.; Kolling, K.; Krause, U.; Höhne, M.; Encke, B.; Plaxton, W. C.; Zeeman, S. C. et al.; Li, Z.; Schulze, W. X.; Hoefgen, R.; Stitt, M.; Lunn, J. E.: Trehalose 6-phosphate coordinates organic and amino acid metabolism with carbon availability. The Plant Journal 85 (3), S. 410 - 423 (2016)
  22. 22.
    Figueroa, C. M.; Lunn, J. E.: A tale of two sugars: Trehalose 6-phosphate and sucrose. Plant Physiology 172 (1), S. 7 - 27 (2016)
  23. 23.
    Flis, A.; Sulpice, R.; Seaton, D. D.; Ivakov, A.; Liput, M.; Abel, C.; Millar, A. J.; Stitt, M.: Photoperiod-dependent changes in the phase of core clock transcripts and global transcriptional outputs at dawn and dusk in Arabidopsis. Plant, Cell and Environment 39 (9), S. 1955 - 1981 (2016)
  24. 24.
    Gago, J.; Daloso, D. M.; Figueroa, C. M.; Flexas, J.; Fernie, A. R.; Nikoloski, Z.: Relationships of Leaf Net Photosynthesis, Stomatal Conductance, and Mesophyll Conductance to Primary Metabolism: A Multispecies Meta-Analysis Approach. Plant Physiology 171 (1), S. 265 - 279 (2016)
  25. 25.
    Harsman, A.; Schock, A.; Hemmis, B.; Wahl, V.; Jeshen, I.; Bartsch, P.; Schlereth, A.; Pertl-Obermeyer, H.; Goetze, T.A.; Soll, J. et al.; Philippar, K.; Wagner, R.: OEP40, a regulated glucose-permeable β-barrel solute channel in the chloroplast outer envelope membrane. Journal of Biological Chemistry 291 (34), S. 17848 - 17860 (2016)
  26. 26.
    Ishihara, H.; Tohge, T.; Viehover, P.; Fernie, A. R.; Weisshaar, B.; Stracke, R.: Natural variation in flavonol accumulation in Arabidopsis is determined by the flavonol glucosyltransferase BGLU6. Journal of Experimental Botany 67 (5), S. 1505 - 1517 (2016)
  27. 27.
    Lauxmann, M.; Annunziata, M. G.; Brunoud, G.; Wahl, V.; Koczut, A.; Burgos, A.; Olas, J. J.; Maximova, E.; Abel, C.; Schlereth, A. et al.; Soja, A. M.; Bläsing, O. E.; Lunn, J. E.; Vernoux, T.; Stitt, M.: Reproductive failure in Arabidopsis thaliana under transient carbohydrate limitation: flowers and very young siliques are jettisoned and the meristem is maintained to allow successful resumption of reproductive growth. Plant, Cell and Environment 39 (4), S. 745 - 767 (2016)
  28. 28.
    Mackinder, L. C. M.; Meyer, M. T.; Mettler, T.; Chen, V. K.; Mitchell, M. C.; Caspari, O.; Rosenzweig, E. S. F.; Pallesen, L.; Reeves, G.; Itakura, A. et al.; Roth, R.; Sommer, F.; Geimer, S.; Mühlhaus, T.; Schroda, M.; Goodenough, U.; Stitt, M.; Griffiths, H.; Jonikas, M. C.: A repeat protein links Rubisco to form the eukaryotic carbon-concentrating organelle. Proceedings of the National Academy of Sciences of the United States of America 113 (21), S. 5958 - 5963 (2016)
  29. 29.
    Martin, A. P.; Palmer, W. M.; Brown, C.; Abel, C.; Lunn, J. E.; Furbank, R. T.; Grof, C. P. L.: A developing Setaria viridis internode: an experimental system for the study of biomass generation in a C-4 model species. Biotechnology for Biofuels 9, 45 (2016)
  30. 30.
    Provart, N. J.; Alonso, J.; Assmann, S. M.; Bergmann, D.; Brady, S. M.; Brkljacic, J.; Browse, J.; Chapple, C.; Colot, V.; Cutler, S. et al.; Dangl, J.; Ehrhardt, D.; Friesner, J. D.; Frommer, W. B.; Grotewold, E.; Meyerowitz, E.; Nemhauser, J.; Nordborg, M.; Pikaard, C.; Shanklin, J.; Somerville, C.; Stitt, M.; Torii, K. U.; Waese, J.; Wagner, D.; McCourt, P.: 50 years of Arabidopsis research: highlights and future directions. New Phytologist 209 (3), S. 921 - 944 (2016)
  31. 31.
    Shane, M. W.; Feil, R.; Lunn, J. E.; Plaxton, W. C.: Light-dependent activation of phosphoenolpyruvate carboxylase by reversible phosphorylation in cluster roots of white lupin plants: diurnal control in response to photosynthate supply. Annals of Botany 118 (4-SI), S. 637 - 643 (2016)
  32. 32.
    Tohge, T.; Wendenburg, R.; Ishihara, H.; Nakabayashi, R.; Watanabe, M.; Sulpice, R.; Hoefgen, R.; Takayama, H.; Saito, K.; Stitt, M. et al.; Fernie, A. R.: Characterization of a recently evolved flavonol-phenylacyltransferase gene provides signatures of natural light selection in Brassicaceae. Nature Communications 7, 12399 (2016)
  33. 33.
    Toubiana, D.; Xue, W.; Zhang, N.; Kremling, K.; Gur, A.; Pilosof, S.; Gibon, Y.; Stitt, M.; Buckler, E. S.; Fernie, A. R. et al.; Fait, A.: Correlation-Based Network Analysis of Metabolite and Enzyme Profiles Reveals a Role of Citrate Biosynthesis in Modulating N and C Metabolism in Zea mays. Frontiers in Plant Science 7, 1022 (2016)
  34. 34.
    Vicente, R.; Pérez, P.; Martínez-Carrasco, R.; Feil, R.; Lunn, J. E.; Watanabe, M.; Arrivault, S.; Stitt, M.; Hoefgen, R.; Morcuende, R.: Metabolic and Transcriptional Analysis of Durum Wheat Responses to Elevated CO2 at Low and High Nitrate Supply. Plant Cell Physiology 57 (10), S. 2133 - 2146 (2016)
  35. 35.
    Wu, S.; Alseekh, S.; Cuadros-Inostroza, A. C.; Fusari, C. M.; Mutwil, M.; Kooke, R.; Keurentjes, J. B.; Fernie, A. R.; Willmitzer, L.; Brotman, Y.: Combined Use of Genome-Wide Association Data and Correlation Networks Unravels Key Regulators of Primary Metabolism in Arabidopsis thaliana. PLoS Genetics 12 (10), e1006363 (2016)
  36. 36.
    Zhang, W.; Thieme, C. J.; Kollwig, G.; Apelt, F.; Yang, L.; Winter, N.; Andresen, N.; Walther, D.; Kragler, F.: tRNA-Related Sequences Trigger Systemic mRNA Transport in Plants. Plant Cell 28 (6), S. 1237 - 1249 (2016)
  37. 37.
    Zhu, X.-G.; Lynch, J. P.; LeBauer, D. S.; Millar, A. J.; Stitt, M.; Long, S. P.: Plants in silico: why, why now and what?an integrative platform for plant systems biology research. Plant, Cell and Environment 39 (5), S. 1049 - 1057 (2016)
  38. 38.
    Apelt, F.; Breuer, D.; Nikoloski, Z.; Stitt, M.; Kragler, F.: Phytotyping(4D): a light-field imaging system for non-invasive and accurate monitoring of spatio-temporal plant growth. The Plant Journal 82 (4), S. 693 - 706 (2015)
  39. 39.
    Arrivault, S.; Guenther, M.; Fry, S. C.; Fünfgeld, M. F.F.; Veye, D.; Mettler-Altmann, T.; Stitt, M.; Lunn, J. E.: Synthesis and Use of Stable-Isotope-Labeled Internal Standards for Quantification of Phosphorylated Metabolites by LC-MS/MS. Analytical Chemistry 87 (13), S. 6896 - 6904 (2015)
  40. 40.
    Baerenfaller, K.; Massonnet, C.; Hennig, L.; Russenberger, D.; Sulpice, R.; Walsh, S.; Stitt, M.; Granier, C.; Gruissem, W.: A long photoperiod relaxes energy management in Arabidopsis leaf six. Current Plant Biology 2, S. 34 - 45 (2015)
  41. 41.
    Barbier, F. F.; Lunn, J. E.; Beveridge, C. A.: Ready, steady, go! A sugar hit starts the race to shoot branching. Current Opinion in Plant Biology 25, S. 39 - 45 (2015)
  42. 42.
    Bielecka, M.; Watanabe, M.; Morcuende, R.; Scheible, W.-R.; Hawkesford, M. J.; Hesse, H.; Hoefgen, R.: Transcriptome and metabolome analysis of plant sulphate starvation and resupply provides novel information on transcriptional regulation of metabolism associated with sulphur, nitrogen and phosphorus nutritional responses in Arabidopsis. Frontiers in Plant Science 5, 805 (2015)
  43. 43.
    Chew, Y. H.; Wenden, B.; Flis, A.; Mengin, V.; Taylor, J.; Davey, C. L.; Tindal, C.; Thomas, H.; Ougham, H. J.; de Reffye, P. et al.; Stitt, M.; Williams, M.; Muetzelfeldt, R.; Halliday, K. J.; Millar, A. J.: Multiscale digital Arabidopsis predicts individual organ and whole-organism growth (vol 111, pg E4127, 2014). Proceedings of the National Academy of Sciences of the United States of America 112 (19), E2556 (2015)
  44. 44.
    Curto, M.; Krajinski, F.; Schlereth, A.; Rubiales, D.: Transcriptional profiling of Medicago truncatula during Erysiphe pisi infection. Frontiers in Plant Science 6, 517 (2015)
  45. 45.
    Delorge, I.; Figueroa, C. M.; Feil, R.; Lunn, J. E.; Van Dijck, P.: Trehalose-6-phosphate synthase 1 is not the only active TPS in Arabidopsis thaliana. BIOCHEMICAL JOURNAL 466, S. 283 - 290 (2015)
  46. 46.
    Dyson, B. C.; Allwood, J. W.; Feil, R.; Xu, Y.; Miller, M.; Bowsher, C. G.; Goodacre, R.; Lunn, J. E.; Johnson, G. N.: Acclimation of metabolism to light in Arabidopsis thaliana: the glucose 6-phosphate/phosphate translocator GPT2 directs metabolic acclimation. Plant, Cell and Environment 38 (7), S. 1404 - 1417 (2015)
  47. 47.
    Ferraro, G.; D'Angelo, M.; Sulpice, R.; Stitt, M.; Valle, E. M.: Reduced levels of NADH-dependent glutamate dehydrogenase decrease the glutamate content of ripe tomato fruit but have no effect on green fruit or leaves. Journal of Experimental Botany 66 (11), S. 3381 - 3389 (2015)
  48. 48.
    Flis, A.; Fernandez, A. P.; Zielinski, T.; Mengin, V.; Sulpice, R.; Stratford, K.; Hume, A.; Pokhilko, A.; Southern, M. M.; Seaton, D. D. et al.; McWatters, H. G.; Stitt, M.; Halliday, K. J.; Millar, A. J.: Defining the robust behaviour of the plant clock gene circuit with absolute RNA timeseries and open infrastructure. Open biology 5 (10), 150042 (2015)
  49. 49.
    Garapati, P.; Feil, R.; Lunn, J. E.; Van Dijck, P.; Balazadeh, S.; Mueller-Roeber, B.: Transcription Factor Arabidopsis Activating Factor1 Integrates Carbon Starvation Responses with Trehalose Metabolism. Plant Physiology 169 (1), S. 379 - 390 (2015)
  50. 50.
    Heise, R.; Fernie, A. R.; Stitt, M.; Nikoloski, Z.: Pool size measurements facilitate the determination of fluxes at branching points in non-stationary metabolic flux analysis: the case of Arabidopsis thaliana. Frontiers in Plant Science 6, 386 (2015)
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