Publikationen der Gruppe

Zeitschriftenartikel (313)

  1. 1.
    Alhajturki, D.; Muralidharan, S.; Nurmi, M.; Rowan, B. A.; Lunn, J. E.; Boldt, H.; Salem, M.A.; Alseekh, S.; Jorzig, C.; Feil, R. et al.; Giavalisco, P.; Fernie, A. R.; Weigel, D.; Laitinen, R.: Dose-dependent interactions between two loci trigger altered shoot growth in BG-5 × Krotzenburg-0 (Kro-0) hybrids of Arabidopsis thaliana. New Phytologist 217 (1), S. 392 - 406 (2018)
  2. 2.
    Andersson, M.; Turesson, H.; Arrivault, S.; Zhang, Y.; Fält, A.-S.; Fernie, A. R.; Hofvander, P.: Inhibition of plastid PPase and NTT leads to major changes in starch and tuber formation in potato. Journal of Experimental Botany 69 (8), S. 1913 - 1924 (2018)
  3. 3.
    Frei, B.; Eisenach, C.; Martinoia, E.; Hussein, S.; Chen, X.-Z.; Arrivault, S.; Neuhaus, H.E.: Purification and functional characterization of the vacuolar malate transporter tDT from Arabidopsis. The Journal of Biological Chemistry 293 (11), S. 4180 - 4190 (2018)
  4. 4.
    Hansen, B. O.; Meyer, E. H.; Ferrari, C.; Vaid, N.; Movahedi, S.; Vandepoele, K.; Nikoloski, Z.; Mutwil, M.: Ensemble gene function prediction database reveals genes important for complex I formation in Arabidopsis thaliana. New Phytologist 217 (4), S. 1521 - 1534 (2018)
  5. 5.
    Seaton, D. D.; Graf, A.; Baerenfaller, K.; Stitt, M.; Millar, A. J.; Gruissem, W.: Photoperiodic control of the Arabidopsis proteome reveals a translational coincidence mechanism. Molecular Systems Biology 14 (3), e7962 (2018)
  6. 6.
    Verbančič, J.; Lunn, J. E.; Stitt, M.; Persson, S.: Carbon Supply and the Regulation of Cell Wall Synthesis. Molecular Plant 11 (1), S. 75 - 94 (2018)
  7. 7.
    Annunziata, M. G.; Ciarmiello, L.; Woodrow, P.; Maximova, E.; Fuggi, A.; Carillo, P.: Durum wheat roots adapt to salinity remodelling the cellular content of nitrogen metabolites and sucrose. Frontiers in Plant Science 7, 2035 (2017)
  8. 8.
    Annunziata, M. G.; Apelt, F.; Carillo, P.; Krause, U.; Feil, R.; Mengin, V.; Lauxmann, M.; Koehl, K. I.; Nikoloski, Z.; Stitt, M. et al.; Lunn, J. E.; Raines, C.: Getting back to nature: a reality check for experiments in controlled environments. Journal of Experimental Botany 68 (16), S. 4463 - 4477 (2017)
  9. 9.
    Apelt, F.; Breuer, D.; Olas, J. J.; Annunziata, M. G.; Flis, A.; Nikoloski, Z.; Kragler, F.; Stitt, M.: Circadian, Carbon, and Light Control of Expansion Growth and Leaf Movement. Plant Physiology 174 (3), S. 1949 - 1968 (2017)
  10. 10.
    Arrivault, S.; Obata, T.; Szecówka, M.; Mengin, V.; Guenther, M.; Höhne, M.; Fernie, A. R.; Stitt, M.: Metabolite pools and carbon flow during C4 photosynthesis in maize: 13CO2 labeling kinetics and cell type fractionation. Journal of Experimental Botany 68, S. 283 - 298 (2017)
  11. 11.
    Bledsoe, S. W.; Henry, C.; Griffiths, C. A.; Paul, M. J.; Feil, R.; Lunn, J. E.; Stitt, M.; Lagrimini, L. M.: The role of Tre6P and SnRK1 in maize early kernel development and events leading to stress-induced kernel abortion. BMC Plant Biology (2017)
  12. 12.
    Fernandez, O.; Ishihara, H.; George, G. M.; Mengin, V.; Flis, A.; Sumner, D.; Arrivault, S.; Feil, R.; Lunn, J. E.; Zeeman, S. C. et al.; Smith, A. M.; Stitt, M.: Leaf Starch Turnover Occurs in Long Days and in Falling Light at the End of the Day. PLANT PHYSIOLOGY 174 (4), S. 2199 - 2212 (2017)
  13. 13.
    Ficarra, F. A.; Grandellis, C.; Galván, E. M.; Ielpi, L.; Feil, R.; Lunn, J. E.; Gottig, N.; Ottado, J.: Xanthomonas citri ssp. citri requires the outer membrane porin OprB for maximal virulence and biofilm formation. Molecular Plant Pathology 18 (5), S. 720 - 733 (2017)
  14. 14.
    Fichtner, F.; Barbier, F. F.; Feil, R.; Watanabe, M.; Annunziata, M. G.; Chabikwa, T. G.; Hoefgen, R.; Stitt, M.; Beveridge, C. A.; Lunn, J. E.: Trehalose 6-phosphate is involved in triggering axillary bud outgrowth in garden pea (Pisum sativum L.). The Plant Journal 92 (4), S. 611 - 623 (2017)
  15. 15.
    Filippi, C.V.; Zubrzycki, J.E.; Di Rienzo, J.A.; Quiroz, F.; Fusari, C. M.; Alvarez, D.; Maringolo, C.A.; Cordes, D.; Escande, A.; Hopp, H.E. et al.; Heinz, R.A.; Lia, V.V.; Paniego, N.B.: Phenotyping sunflower genetic resources for sclerotinia head rot response: Assessing variability for disease resistance breeding. Plant Disease 101 (11), S. 1941 - 1948 (2017)
  16. 16.
    Fluegel, F.; Timm, S.; Arrivault, S.; Florian, A.; Stitt, M.; Fernie, A. R.; Bauwe, H.: The Photorespiratory Metabolite 2-Phosphoglycolate Regulates Photosynthesis and Starch Accumulation in Arabidopsis. The Plant Cell 29 (10), S. 2537 - 2551 (2017)
  17. 17.
    Fusari, C. M.; Kooke, R.; Lauxmann, M.; Annunziata, M. G.; Enke, B.; Höhne, M.; Krohn, N.; Becker, F. F. M.; Schlereth, A.; Sulpice, R. et al.; Stitt, M.; Keurentjes, J. J. B.: Genome-Wide Association Mapping Reveals That Specific and Pleiotropic Regulatory Mechanisms Fine-Tune Central Metabolism and Growth in Arabidopsis. The Plant Cell 29 (10), S. 2349 - 2373 (2017)
  18. 18.
    Glaubitz, U.; Li, X.; Schaedel, S.; Erban, A.; Sulpice, R.; Kopka, J.; Hincha, D. K.; Zuther, E.: Integrated analysis of rice transcriptomic and metabolomic responses to elevated night temperatures identifies sensitivity- and tolerance-related profiles. Plant, Cell and Environment 40 (1), S. 121 - 137 (2017)
  19. 19.
    Graf, A.; Coman, D.; Uhrig, R.G.; Walsh, S.; Flis, A.; Stitt, M.; Gruissem, W.: Parallel analysis of arabidopsis circadian clock mutants reveals different scales of transcriptome and proteome regulation. Open Biology 7 (3), 160333 (2017)
  20. 20.
    Hill, B. L.; Figueroa, C. M.; Asencion Diez, M. D.; Lunn, J. E.; Iglesias, A. A.; Ballicora, M. A.: On the stability of nucleoside diphosphate glucose metabolites: implications for studies of plant carbohydrate metabolism. Journal of Experimental Botany 68 (13), S. 3331 - 3337 (2017)
  21. 21.
    Ishihara, H.; Moraes, T. A.; Pyl, E. T.; Schulze, W. X.; Obata, T.; Scheffel, A.; Fernie, A. R.; Sulpice, R.; Stitt, M.: Growth rate correlates negatively with protein turnover in Arabidopsis accessions. The Plant Journal 91 (3), S. 416 - 429 (2017)
  22. 22.
    Ivakov, A.; Flis, A.; Apelt, F.; Fünfgeld, M. F.F.; Scherer, U.; Stitt, M.; Kragler, F.; Vissenberg, K.; Persson, S.; Suslov, D.: Cellulose Synthesis and Cell Expansion Are Regulated by Different Mechanisms in Growing Arabidopsis Hypocotyls. The Plant Cell 29 (6), S. 1305 - 1315 (2017)
  23. 23.
    Malinova, I.; Alseekh, S.; Feil, R.; Fernie, A. R.; Baumann, O.; Schöttler, M. A.; Lunn, J. E.; Fettke, J.: Starch synthase 4 and plastidal phosphorylase differentially affect starch granule number and morphology. Plant Physiology (2017)
  24. 24.
    Marshall-Colon, A.; Long, S. P.; Allen, D. K.; Allen, G.; Beard, D. A.; Benes, B.; von Caemmerer, S.; Christensen, A. J.; Cox, D. J.; Hart, J. C. et al.; Hirst, P. M.; Kannan, K.; Katz, D. S.; Lynch, J. P.; Millar, A. J.; Panneerselvam, B.; Price, N. D.; Prusinkiewicz, P.; Raila, D.; Shekar, R. G.; Shrivastava, S.; Shukla, D.; Srinivasan, V.; Stitt, M.; Turk, M. J.; Voit, E. O.; Wang, Y.; Yin, X.; Zhu, X.-G.: Crops In Silico: Generating Virtual Crops Using an Integrative and Multi-scale Modeling Platform. Frontiers in Plant Science 8, 786 (2017)
  25. 25.
    Medeiros, D.B.; Barros, K. A.; Barros, J. A. S.; Omena-Garcia, R. P.; Arrivault, S.; Sanglard, L. M. V. P.; Detmann, K. C.; Silva, W. B.; Daloso, D. M.; DaMatta, F. M. et al.; Nunes-Nesi, A.; Fernie, A. R.; Araujo, W. L.: Impaired Malate and Fumarate Accumulation Due to the Mutation of the Tonoplast Dicarboxylate Transporter Has Little Effects on Stomatal Behavior. Plant Physiology 175 (3), S. 1068 - 1081 (2017)
  26. 26.
    Mengin, V.; Pyl, E. T.; Moraes, T. A.; Sulpice, R.; Krohn, N.; Encke, B.; Stitt, M.: Photosynthate Partitioning to Starch in Arabidopsis is Insensitive to Light Intensity but Sensitive to Photoperiod due to a Restriction on Growth in the Light in Short Photoperiods. Plant, Cell and Environment 40 (11-SI), S. 2608 - 2627 (2017)
  27. 27.
    Pick, U.; Avidan, O.: Triacylglycerol is produced from starch and polar lipids in the green alga Dunaliella tertiolecta. Journal of Experimental Botany 68 (17), S. 4939 - 4950 (2017)
  28. 28.
    Roach, M.; Arrivault, S.; Mahboubi, A.; Krohn, N.; Sulpice, R.; Stitt, M.; Niittyla, T.: Spatially resolved metabolic analysis reveals a central role for transcriptional control in carbon allocation to wood. Journal of Experimental Botany 68 (13), S. 3529 - 3539 (2017)
  29. 29.
    Santelia, D.; Lunn, J. E.: Transitory starch metabolism in guard cells: unique features for a unique function. Plant Physiology 174 (2), S. 539 - 549 (2017)
  30. 30.
    Westhues, M.; Schrag, T. A.; Heuer, C.; Thaller, G.; Utz, H. F.; Schipprack, W.; Thiemann, A.; Seifert, F.; Ehret, A.; Schlereth, A. et al.; Stitt, M.; Nikoloski, Z.; Willmitzer, L.; Schoen, C. C.; Scholten, S.; Melchinger, A. E.: Omics-based hybrid prediction in maize. THEORETICAL AND APPLIED GENETICS 130 (9), S. 1927 - 1939 (2017)
  31. 31.
    Woodrow, P.; Ciarmiello, L.F.; Annunziata, M. G.; Pacifico, S.; Iannuzzi, F.; Mirto, A.; D'Amelia, L.; Dell'Aversana, E.; Piccolella, S.; Fuggi, A. et al.; Carillo, P.: Durum wheat seedling responses to simultaneous high light and salinity involve a fine reconfiguration of amino acids and carbohydrate metabolism. Physiologia Plantarum 159 (3), S. 290 - 312 (2017)
  32. 32.
    Zhang, W.; Lunn, J. E.; Feil, R.; Wang, Y.; Zhao, J.; Tao, H.; Guo, Y.; Zhao, Z.: Trehalose 6-phosphate signal is closely related to sorbitol in apple (Malus domestica Borkh. Cv. Gala). Biology Open 6 (2), S. 260 - 268 (2017)
  33. 33.
    Mackinder, L. C. M.; Meyer, M. T.; Mettler, T.; Chen, V. K.; Mitchell, M. C.; Caspari, O.; Rosenzweig, E. S. F.; Pallesen, L.; Reeves, G.; Itakura, A. et al.; Roth, R.; Sommer, F.; Geimer, S.; Mühlhaus, T.; Schroda, M.; Goodenough, U.; Stitt, M.; Griffiths, H.; Jonikas, M. C.: A repeat protein links Rubisco to form the eukaryotic carbon-concentrating organelle. Proceedings of the National Academy of Sciences of the United States of America 113 (21), S. 5958 - 5963 (2016)
  34. 34.
    Gago, J.; Daloso, D. M.; Figueroa, C. M.; Flexas, J.; Fernie, A. R.; Nikoloski, Z.: Relationships of Leaf Net Photosynthesis, Stomatal Conductance, and Mesophyll Conductance to Primary Metabolism: A Multispecies Meta-Analysis Approach. Plant Physiology 171 (1), S. 265 - 279 (2016)
  35. 35.
    Zhu, X.-G.; Lynch, J. P.; LeBauer, D. S.; Millar, A. J.; Stitt, M.; Long, S. P.: Plants in silico: why, why now and what?an integrative platform for plant systems biology research. Plant, Cell and Environment 39 (5), S. 1049 - 1057 (2016)
  36. 36.
    Cookson, S. J.; Yadav, U. P.; Klie, S.; Morcuende, R.; Usadel, B.; Lunn, J. E.; Stitt, M.: Temporal kinetics of the transcriptional response to carbon depletion and sucrose readdition in Arabidopsis seedlings. Plant, Cell and Environment 39 (4), S. 768 - 786 (2016)
  37. 37.
    Lauxmann, M.; Annunziata, M. G.; Brunoud, G.; Wahl, V.; Koczut, A.; Burgos, A.; Olas, J. J.; Maximova, E.; Abel, C.; Schlereth, A. et al.; Soja, A. M.; Bläsing, O. E.; Lunn, J. E.; Vernoux, T.; Stitt, M.: Reproductive failure in Arabidopsis thaliana under transient carbohydrate limitation: flowers and very young siliques are jettisoned and the meristem is maintained to allow successful resumption of reproductive growth. Plant, Cell and Environment 39 (4), S. 745 - 767 (2016)
  38. 38.
    Bechtold, U.; Penfold, C. A.; Jenkins, D. J.; Legaie, R.; Moore, J. D.; Lawson, T.; Matthews, J. S. A.; Vialet-Chabrand, S. R. M.; Baxter, L.; Subramaniam, S. et al.; Hickman, R.; Florance, H.; Sambles, C.; Salmon, D. L.; Feil, R.; Bowden, L.; Hill, C.; Baker, N. R.; Lunn, J. E.; Finkenstaedt, B.; Mead, A.; Buchanan-Wollaston, V.; Beynon, J.; Rand, D. A.; Wild, D. L.; Denby, K. J.; Ott, S.; Smirnoff, N.; Mullineaux, P. M.: Time-Series Transcriptomics Reveals That AGAMOUS-LIKE22 Affects Primary Metabolism and Developmental Processes in Drought-Stressed Arabidopsis. The Plant Cell 28 (2), S. 345 - 366 (2016)
  39. 39.
    Provart, N. J.; Alonso, J.; Assmann, S. M.; Bergmann, D.; Brady, S. M.; Brkljacic, J.; Browse, J.; Chapple, C.; Colot, V.; Cutler, S. et al.; Dangl, J.; Ehrhardt, D.; Friesner, J. D.; Frommer, W. B.; Grotewold, E.; Meyerowitz, E.; Nemhauser, J.; Nordborg, M.; Pikaard, C.; Shanklin, J.; Somerville, C.; Stitt, M.; Torii, K. U.; Waese, J.; Wagner, D.; McCourt, P.: 50 years of Arabidopsis research: highlights and future directions. New Phytologist 209 (3), S. 921 - 944 (2016)
  40. 40.
    Coluccio Leskow, C.; Kamenetzky, L.; Guadalupe Dominguez, P.; Diaz Zirpolo, J. A.; Obata, T.; Costa, H.; Marti, M.; Taboga, O.; Keurentjes, J.; Sulpice, R. et al.; Ishihara, H.; Stitt, M.; Fernie, A. R.; Carrari, F.: Allelic differences in a vacuolar invertase affect Arabidopsis growth at early plant development. Journal of Experimental Botany 67 (14), S. 4091 - 4103 (2016)
  41. 41.
    Czedik-Eysenberg, A.; Arrivault, S.; Lohse, M.A.; Feil, R.; Krohn, N.; Encke, B.; Nunes-Nesi, A.; Fernie, A. R.; Lunn, J. E.; Sulpice, R. et al.; Stitt, M.: The interplay between carbon availability and growth in different zones of the growing maize leaf. Plant Physiology 172 (2), S. 943 - 967 (2016)
  42. 42.
    Dyson, B. C.; Miller, M. A.E.; Feil, R.; Rattray, N.; Bowsher, C. G.; Goodacre, R.; Lunn, J. E.; Johnson, G. N.: FUM2, a cytosolic fumarase, is essential for acclimation to low temperature in arabidopsis thaliana. Plant Physiology 172 (1), S. 118 - 127 (2016)
  43. 43.
    Figueroa, C. M.; Feil, R.; Ishihara, H.; Watanabe, M.; Kolling, K.; Krause, U.; Höhne, M.; Encke, B.; Plaxton, W. C.; Zeeman, S. C. et al.; Li, Z.; Schulze, W. X.; Hoefgen, R.; Stitt, M.; Lunn, J. E.: Trehalose 6-phosphate coordinates organic and amino acid metabolism with carbon availability. The Plant Journal 85 (3), S. 410 - 423 (2016)
  44. 44.
    Figueroa, C. M.; Lunn, J. E.: A tale of two sugars: Trehalose 6-phosphate and sucrose. Plant Physiology 172 (1), S. 7 - 27 (2016)
  45. 45.
    Flis, A.; Sulpice, R.; Seaton, D. D.; Ivakov, A.; Liput, M.; Abel, C.; Millar, A. J.; Stitt, M.: Photoperiod-dependent changes in the phase of core clock transcripts and global transcriptional outputs at dawn and dusk in Arabidopsis. Plant, Cell and Environment 39 (9), S. 1955 - 1981 (2016)
  46. 46.
    Harsman, A.; Schock, A.; Hemmis, B.; Wahl, V.; Jeshen, I.; Bartsch, P.; Schlereth, A.; Pertl-Obermeyer, H.; Goetze, T.A.; Soll, J. et al.; Philippar, K.; Wagner, R.: OEP40, a regulated glucose-permeable β-barrel solute channel in the chloroplast outer envelope membrane. Journal of Biological Chemistry 291 (34), S. 17848 - 17860 (2016)
  47. 47.
    Ishihara, H.; Tohge, T.; Viehover, P.; Fernie, A. R.; Weisshaar, B.; Stracke, R.: Natural variation in flavonol accumulation in Arabidopsis is determined by the flavonol glucosyltransferase BGLU6. Journal of Experimental Botany 67 (5), S. 1505 - 1517 (2016)
  48. 48.
    Martin, A. P.; Palmer, W. M.; Brown, C.; Abel, C.; Lunn, J. E.; Furbank, R. T.; Grof, C. P. L.: A developing Setaria viridis internode: an experimental system for the study of biomass generation in a C-4 model species. Biotechnology for Biofuels 9, 45 (2016)
  49. 49.
    Shane, M. W.; Feil, R.; Lunn, J. E.; Plaxton, W. C.: Light-dependent activation of phosphoenolpyruvate carboxylase by reversible phosphorylation in cluster roots of white lupin plants: diurnal control in response to photosynthate supply. Annals of Botany 118 (4-SI), S. 637 - 643 (2016)
  50. 50.
    Tohge, T.; Wendenburg, R.; Ishihara, H.; Nakabayashi, R.; Watanabe, M.; Sulpice, R.; Hoefgen, R.; Takayama, H.; Saito, K.; Stitt, M. et al.; Fernie, A. R.: Characterization of a recently evolved flavonol-phenylacyltransferase gene provides signatures of natural light selection in Brassicaceae. Nature Communications 7, 12399 (2016)
 
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